Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0951
         (673 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7NB84 Cluster: Putative uncharacterized protein; n=1; ...    33   6.3  

>UniRef50_Q7NB84 Cluster: Putative uncharacterized protein; n=1;
           Mycoplasma gallisepticum|Rep: Putative uncharacterized
           protein - Mycoplasma gallisepticum
          Length = 143

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 28/85 (32%), Positives = 45/85 (52%)
 Frame = -3

Query: 569 NKILYXSXISSFKVTLMKF*VKMVALT*SNVLDQHVI*KFNL*YLQLPLALRTNLFKILQ 390
           NKI+  + IS F + L+ F + ++ L   N+ + +V  K +   +Q+ L   + L K +Q
Sbjct: 23  NKIINSTIISLF-IVLLTF-LAIIFLVRINLYESYVFHKQDQ-KIQVNLTQDSQLAKFIQ 79

Query: 389 IFPPYKHTYLVGRYQNN*NLYKFNI 315
                K  YL+G Y+NN N  KF I
Sbjct: 80  T---NKAKYLIGYYKNNSNALKFMI 101


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,708,164
Number of Sequences: 1657284
Number of extensions: 9425497
Number of successful extensions: 15555
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 15148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15552
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)