Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0951
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   4.0  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   4.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   5.3  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   5.3  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   5.3  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   5.3  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 404 FKILQIFPPYKHTYL 360
           F+ L ++ PYKH Y+
Sbjct: 128 FRSLAVWVPYKHLYV 142


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 404 FKILQIFPPYKHTYL 360
           F+ L ++ PYKH Y+
Sbjct: 128 FRSLAVWVPYKHLYV 142


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 655 IEIGVTLSHTFYHLTSVI 602
           I +   +SHT YHL  +I
Sbjct: 136 ISVVQKVSHTLYHLQDII 153


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 132 NCILNWVNCYAIDN 173
           NC L ++NC A+ N
Sbjct: 172 NCALWYINCRAVGN 185


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 132 NCILNWVNCYAIDN 173
           NC L ++NC A+ N
Sbjct: 172 NCALWYINCRAVGN 185


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 132 NCILNWVNCYAIDN 173
           NC L ++NC A+ N
Sbjct: 172 NCALWYINCRAVGN 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,184
Number of Sequences: 336
Number of extensions: 2826
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)