Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0951
         (673 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92833-2|CAB07379.1|  891|Caenorhabditis elegans Hypothetical pr...    28   6.9  
U41992-9|AAK93854.1|  294|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>Z92833-2|CAB07379.1|  891|Caenorhabditis elegans Hypothetical
           protein F38A6.2 protein.
          Length = 891

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = -1

Query: 235 KKIRVQTSGHRPVCLGASFLTLSIA*QLTQFSMQLEQRP*RQTYANDRIPY 83
           + + +Q     P C G S L   I+   + ++M     P R ++AN +  Y
Sbjct: 71  QNLEIQDQSRSPTCSGYSSLPRRISGSKSSYTMSPSHAPPRSSHANSKSLY 121


>U41992-9|AAK93854.1|  294|Caenorhabditis elegans Hypothetical
           protein F32E10.7 protein.
          Length = 294

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 436 RYQRLNFQITCWSNTLDYVNATIF 507
           R+Q++   +T W N+LDY    IF
Sbjct: 162 RFQKMKSHLTTWFNSLDYDGEYIF 185


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,061,307
Number of Sequences: 27780
Number of extensions: 243824
Number of successful extensions: 399
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 399
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)