Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0948
         (696 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   0.91 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      25   0.91 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.91 
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    24   1.2  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.5  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
 Frame = +1

Query: 490 DRKHSTRRDESLIEVYVSSWEFDPYLNMEENA-YLFAEIGVAGNFFI*KNYFNAPFRPYW 666
           D K S +  E +I    S W  +   N+E    Y   +IG+   +F  +  F     P+W
Sbjct: 189 DTKTSGKYKEYIIPANYSGWYLNHDYNLENKLNYFIEDIGLNTYYFFLRQAF-----PFW 243

Query: 667 SMSSPF 684
             S  +
Sbjct: 244 LPSKEY 249


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
 Frame = +1

Query: 490 DRKHSTRRDESLIEVYVSSWEFDPYLNMEEN-AYLFAEIGVAGNFFI*KNYFNAPFRPYW 666
           D K S +  E +I    S W  +   N+E    Y   +IG+   +F  +  F     P+W
Sbjct: 189 DTKTSGKYKEYIIPANYSGWYLNHDYNLENKLIYFIEDIGLNTYYFFLRQAF-----PFW 243

Query: 667 SMSSPF 684
             S  +
Sbjct: 244 LPSKEY 249


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 334 GYKNTKKSTGFTIKIAVD*PASNFDMVS 417
           GYK++++   FT+  + D  +SN D +S
Sbjct: 27  GYKHSRRHRDFTVAESYDASSSNSDSLS 54


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -3

Query: 346 YFYTLDNILKAIYNFN*ALSQWLQ*VRIIIIL 251
           YFY   N  +A+ +    +  WL  +RI++++
Sbjct: 30  YFYDYSNRTQALESIIANIPTWLSFIRIVLVI 61


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 506 VLCFLSQFFLVCTPLRV 456
           ++C+L+ F L+ TP  V
Sbjct: 562 LVCYLNTFLLLATPTTV 578


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 506 VLCFLSQFFLVCTPLRV 456
           ++C+L+ F L+ TP  V
Sbjct: 652 LVCYLNTFLLLATPTTV 668


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,939
Number of Sequences: 438
Number of extensions: 3800
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)