Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0947
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.53 
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    24   0.93 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    24   0.93 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.6  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   6.6  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   6.6  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   6.6  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   8.7  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 302 FFKLFYIEALMELVYIFLILNL 367
           FFK F    LM++ Y FL+++L
Sbjct: 167 FFKTFLNSCLMDVYYEFLLISL 188


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 505 TISNVFCFFLLFYLVMCFINI*NLIYIICEVN 600
           T+      FLLFYL  C+  I   IY +  ++
Sbjct: 6   TVLTAAAVFLLFYLFYCYKTIKQHIYSLISLS 37


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 505 TISNVFCFFLLFYLVMCFINI*NLIYIICEVN 600
           T+      FLLFYL  C+  I   IY +  ++
Sbjct: 6   TVLTAAAVFLLFYLFYCYKTIKQHIYSLISLS 37


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 305 KKHGPDNEYTFVN 267
           K  GPD+ Y+F+N
Sbjct: 363 KSLGPDSVYSFIN 375


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 305 KKHGPDNEYTFVN 267
           K  GPD+ Y+F+N
Sbjct: 255 KSLGPDSVYSFIN 267


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 412 FFSLYLCSLLNSLVKIVISKF 474
           FFS ++C+L+N  V  +   F
Sbjct: 45  FFSAWICALVNYNVSEISENF 65


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 368 VNLKLKKYKPTPSM 327
           +NL + KY+P PS+
Sbjct: 144 LNLTMPKYEPNPSI 157


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 368 VNLKLKKYKPTPSM 327
           +NL + KY+P PS+
Sbjct: 144 LNLTMPKYEPNPSI 157


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +1

Query: 439 LNSLVKIVISKFVLNLVPFWFWTISNVFCFFLLF 540
           +N  +  V  +FVL  VP + + + N    +L+F
Sbjct: 126 VNLAILGVFGEFVLVFVPDYVFFVENEPILYLIF 159


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,316
Number of Sequences: 336
Number of extensions: 2825
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)