Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0943
         (694 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    84   1e-18
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    38   1e-04
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    37   2e-04
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   4.8  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    22   4.8  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   4.8  

>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 84.2 bits (199), Expect = 1e-18
 Identities = 37/67 (55%), Positives = 52/67 (77%)
 Frame = +2

Query: 56  EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEXNLVTSSTFKTTE 235
           +F+GK+YK+ SSENFD+FMK +GVG++TRK  ++V+P VEL ++     L T+S FK TE
Sbjct: 3   DFLGKRYKLYSSENFDDFMKALGVGIMTRKVGSSVSPVVELTENNGLYTLKTTSPFKNTE 62

Query: 236 MKFKPGE 256
           +KFK GE
Sbjct: 63  IKFKLGE 69



 Score = 74.5 bits (175), Expect = 9e-16
 Identities = 36/64 (56%), Positives = 42/64 (65%)
 Frame = +1

Query: 256 EFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVXYVREFGPEEMKAVMXAKDVTCTRV 435
           EFEE+  DG KVKSVCT +GN L QVQK     +    REF   EMKA+M   D+ CTRV
Sbjct: 70  EFEEETVDGRKVKSVCTLDGNKLIQVQKGEK--QTTIEREFSSTEMKAIMKVDDIICTRV 127

Query: 436 YKVQ 447
           YK+Q
Sbjct: 128 YKIQ 131


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 37.5 bits (83), Expect = 1e-04
 Identities = 22/65 (33%), Positives = 32/65 (49%)
 Frame = +2

Query: 53  MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEXNLVTSSTFKTT 232
           ++F GK ++  S  NF+EF K +G   +         P+ EL K+GDE    +SS   T 
Sbjct: 2   VQFEGK-FQFVSQNNFEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSSGDNTY 59

Query: 233 EMKFK 247
              FK
Sbjct: 60  TKTFK 64


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 37.1 bits (82), Expect = 2e-04
 Identities = 22/64 (34%), Positives = 31/64 (48%)
 Frame = +2

Query: 56  EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEXNLVTSSTFKTTE 235
           +F GK ++  S  NF+EF K +G   +         P+ EL K+GDE    +SS   T  
Sbjct: 1   QFEGK-FQFVSQNNFEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSSGDNTYT 58

Query: 236 MKFK 247
             FK
Sbjct: 59  KTFK 62


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 301 CTFEGNTLKQVQKAPDGL 354
           CT EGN LK+V   PD L
Sbjct: 57  CTAEGNELKRV--LPDAL 72


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 301 CTFEGNTLKQVQKAPDGL 354
           CT EGN LK+V   PD L
Sbjct: 57  CTAEGNELKRV--LPDAL 72


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 301 CTFEGNTLKQVQKAPDGL 354
           CT EGN LK+V   PD L
Sbjct: 57  CTAEGNELKRV--LPDAL 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,818
Number of Sequences: 438
Number of extensions: 2912
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)