Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0941
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.2  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   9.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.6  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
 Frame = -1

Query: 627 ILDKFMKHFLFRKLKWNFRYCFK-----QYCEFYQVFFKI 523
           ++  F K   + +L  N   C K     +YC +Y  FF +
Sbjct: 84  VVTTFYKRRTWTRLLKNLESCAKIKKTKRYCYYYYAFFGV 123


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/34 (23%), Positives = 17/34 (50%)
 Frame = +2

Query: 374 MSVWACQTAFSQPLI*YSLRRILKNLL*ISVHFH 475
           ++ W     +S P++ +   +I+K  L   + FH
Sbjct: 144 LAAWFFSALYSLPILIFYEEKIVKGKLQCWIEFH 177


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 618  KFMKHFLFRKLKWNF 574
            +F+KH L    KWNF
Sbjct: 1498 RFIKHVLQFLEKWNF 1512


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,253
Number of Sequences: 336
Number of extensions: 3425
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)