Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0941
         (693 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-3307|AAF53938.1|  148|Drosophila melanogaster CG9336-PA...    33   0.37 
AY075525-1|AAL68332.1|  148|Drosophila melanogaster RE71975p pro...    31   1.1  
AY071621-1|AAL49243.1|  148|Drosophila melanogaster RE67340p pro...    31   1.1  
AY070606-1|AAL48077.1|  147|Drosophila melanogaster RE71014p pro...    30   3.4  
AE014134-1462|AAF52642.1|  147|Drosophila melanogaster CG7781-PA...    30   3.4  
BT022792-1|AAY55208.1|  110|Drosophila melanogaster IP13547p pro...    29   6.0  
AY119487-1|AAM50141.1|  147|Drosophila melanogaster GH07967p pro...    29   7.9  
AY075543-1|AAL68350.1|  159|Drosophila melanogaster RH34376p pro...    29   7.9  
AE014298-1524|AAF47975.1| 1037|Drosophila melanogaster CG15207-P...    29   7.9  
AE014134-3308|AAF53940.1|  147|Drosophila melanogaster CG9338-PA...    29   7.9  
AE014134-3303|AAF53934.3|  159|Drosophila melanogaster CG31676-P...    29   7.9  

>AE014134-3307|AAF53938.1|  148|Drosophila melanogaster CG9336-PA
           protein.
          Length = 148

 Score = 33.1 bits (72), Expect = 0.37
 Identities = 24/78 (30%), Positives = 37/78 (47%)
 Frame = +2

Query: 11  YLRNILPVEVLNSVTGAPRYCHKIVMKSGTVVRTCLDVNPNDSQHTCRVVELASNTAIAD 190
           YL+N  P   L + TG  +   + V     +VR+C   + N+ Q  C+     S+ ++  
Sbjct: 59  YLQNFFP---LRNATGCMKKTLESVAGHPQIVRSCYFGDINNIQAGCQ-----SDPSMP- 109

Query: 191 SAKVKSCAVCNKDNCNGA 244
             K   C VC KD CNG+
Sbjct: 110 FVKQLGCDVCTKDECNGS 127


>AY075525-1|AAL68332.1|  148|Drosophila melanogaster RE71975p
           protein.
          Length = 148

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 23/78 (29%), Positives = 36/78 (46%)
 Frame = +2

Query: 11  YLRNILPVEVLNSVTGAPRYCHKIVMKSGTVVRTCLDVNPNDSQHTCRVVELASNTAIAD 190
           YL+N  P   L + TG  +   + V     +VR+C   + N+ Q  C+     S+ ++  
Sbjct: 59  YLQNFFP---LRNATGCMKKTLESVAGHPQIVRSCYFGDINNIQAGCQ-----SDPSMP- 109

Query: 191 SAKVKSCAVCNKDNCNGA 244
             K   C  C KD CNG+
Sbjct: 110 FVKQLGCDACTKDECNGS 127


>AY071621-1|AAL49243.1|  148|Drosophila melanogaster RE67340p
           protein.
          Length = 148

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 23/78 (29%), Positives = 36/78 (46%)
 Frame = +2

Query: 11  YLRNILPVEVLNSVTGAPRYCHKIVMKSGTVVRTCLDVNPNDSQHTCRVVELASNTAIAD 190
           YL+N  P   L + TG  +   + V     +VR+C   + N+ Q  C+     S+ ++  
Sbjct: 59  YLQNFFP---LRNATGCMKKTLESVAGHPQIVRSCYFGDINNIQAGCQ-----SDPSMP- 109

Query: 191 SAKVKSCAVCNKDNCNGA 244
             K   C  C KD CNG+
Sbjct: 110 FVKQLGCDACTKDECNGS 127


>AY070606-1|AAL48077.1|  147|Drosophila melanogaster RE71014p
           protein.
          Length = 147

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
 Frame = +2

Query: 56  GAPRYCHKIVMKSGTVVRTCLDVNPNDSQ--HTCRVVELASNTAIADSAKVKSCAV---C 220
           G P YC KI      ++   ++  P DS+   TC      S       A      V   C
Sbjct: 58  GIPTYCRKITQ----IIEFSVNSLPPDSRVIRTCAYQNQTSTNYCYQRAGFGGRQVVCSC 113

Query: 221 NKDNCNGAG 247
           + DNCNGAG
Sbjct: 114 DTDNCNGAG 122


>AE014134-1462|AAF52642.1|  147|Drosophila melanogaster CG7781-PA
           protein.
          Length = 147

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
 Frame = +2

Query: 56  GAPRYCHKIVMKSGTVVRTCLDVNPNDSQ--HTCRVVELASNTAIADSAKVKSCAV---C 220
           G P YC KI      ++   ++  P DS+   TC      S       A      V   C
Sbjct: 58  GIPTYCRKITQ----IIEFSVNSLPPDSRVIRTCAYQNQTSTNYCYQRAGFGGRQVVCSC 113

Query: 221 NKDNCNGAG 247
           + DNCNGAG
Sbjct: 114 DTDNCNGAG 122


>BT022792-1|AAY55208.1|  110|Drosophila melanogaster IP13547p
           protein.
          Length = 110

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -3

Query: 346 LKVKNIYRIEIIV*KRNT*RSERMWPVGE 260
           + ++   R++IIV +RN+  S+R WP+ E
Sbjct: 70  ISIEKFSRLDIIVSRRNSTPSQRNWPIPE 98


>AY119487-1|AAM50141.1|  147|Drosophila melanogaster GH07967p
           protein.
          Length = 147

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = +2

Query: 11  YLRNILPVEVLNSVTGAPRYCHKIVMKSGTVVRTCLDVNPNDSQHTCRV-VELASNTAIA 187
           +L+N  PV    + TG  +    I   +  +VR+C   N  D++  C+    L  N    
Sbjct: 59  FLQNFFPVR---NATGCMKQTIDIP-GNPQIVRSCYFGNIADTKVGCQTDPSLTIN---- 110

Query: 188 DSAKVKSCAVCNKDNCNG 241
              K+ SC VC +D CNG
Sbjct: 111 ---KLLSCEVCTEDECNG 125


>AY075543-1|AAL68350.1|  159|Drosophila melanogaster RH34376p
           protein.
          Length = 159

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
 Frame = +2

Query: 47  SVTGAPRYCHKIVMK---SGTVVRTCLDVNPNDSQHTCRVVELASNTAIADSAKVKSCAV 217
           SV   P  C K+V +      + R+C   + +DS   C      +N   +   K   C  
Sbjct: 71  SVNARP-VCKKLVQEVYGKRVISRSCFYEDMDDSADKC------ANDQTSSYIKTVYCRT 123

Query: 218 CNKDNCNGA 244
           C  D CNGA
Sbjct: 124 CTTDGCNGA 132


>AE014298-1524|AAF47975.1| 1037|Drosophila melanogaster CG15207-PA
           protein.
          Length = 1037

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -3

Query: 172 GGELDNSAGVLGIVGVDIQASTDNSSALHDDLVTVSRSSRNAVQ 41
           GG L  + G+ G +  + + S DN +A+HD+L     S+  AV+
Sbjct: 44  GGGLGPNCGLSGHLACEARNSRDNVAAVHDELRQQCHSAIVAVE 87


>AE014134-3308|AAF53940.1|  147|Drosophila melanogaster CG9338-PA
           protein.
          Length = 147

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = +2

Query: 11  YLRNILPVEVLNSVTGAPRYCHKIVMKSGTVVRTCLDVNPNDSQHTCRV-VELASNTAIA 187
           +L+N  PV    + TG  +    I   +  +VR+C   N  D++  C+    L  N    
Sbjct: 59  FLQNFFPVR---NATGCMKQTIDIP-GNPQIVRSCYFGNIADTKVGCQTDPSLTIN---- 110

Query: 188 DSAKVKSCAVCNKDNCNG 241
              K+ SC VC +D CNG
Sbjct: 111 ---KLLSCEVCTEDECNG 125


>AE014134-3303|AAF53934.3|  159|Drosophila melanogaster CG31676-PA
           protein.
          Length = 159

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
 Frame = +2

Query: 47  SVTGAPRYCHKIVMK---SGTVVRTCLDVNPNDSQHTCRVVELASNTAIADSAKVKSCAV 217
           SV   P  C K+V +      + R+C   + +DS   C      +N   +   K   C  
Sbjct: 71  SVNARP-VCKKLVQEVYGKRVISRSCFYEDMDDSADKC------ANDQTSSYIKTVYCRT 123

Query: 218 CNKDNCNGA 244
           C  D CNGA
Sbjct: 124 CTTDGCNGA 132


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,897,068
Number of Sequences: 53049
Number of extensions: 582206
Number of successful extensions: 1789
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1789
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)