Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0940
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   1.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   3.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   3.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.2  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 335 ACTSEATVELGSSGRVGG 282
           ACT ++ V  GS G VGG
Sbjct: 143 ACTPDSRVGYGSVGLVGG 160


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 216 LCFCFFFMVLTVTFLPAFQ 160
           LCFCF+++++ V      Q
Sbjct: 324 LCFCFYWLLVMVAMFSRTQ 342


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 216 LCFCFFFMVLTVTFLPAFQ 160
           LCFCF+++++ V      Q
Sbjct: 280 LCFCFYWLLVMVAMFSRTQ 298


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -3

Query: 181 YVFTSIPVYFTSLARINFRTFKF*WTLFIGLAL 83
           Y  T  P+ F +L  I +      W + IG+ L
Sbjct: 162 YQVTGTPIIFHNLTLITYSLCVISWAVGIGIML 194


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -3

Query: 181 YVFTSIPVYFTSLARINFRTFKF*WTLFIGLAL 83
           Y  T  P+ F +L  I +      W + IG+ L
Sbjct: 162 YQVTGTPIIFHNLTLITYSLCVISWAVGIGIML 194


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,174
Number of Sequences: 336
Number of extensions: 2396
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)