Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0939
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       27   0.56 
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    26   0.98 
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    25   2.3  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   5.2  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   9.1  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 27.1 bits (57), Expect = 0.56
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 426 DVSPHPPLLGYCSNHKQVSQKCLEGPCEVIQQ 521
           D S  PPL+ +C   + +  K + G C  +Q+
Sbjct: 83  DTSACPPLIEFCDAERTIRPKNIAGTCCTLQR 114


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 26.2 bits (55), Expect = 0.98
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +2

Query: 215 NWDGALDDLTKLRGSSITVEPVPLPATCKPYSNGPGWFTGR 337
           ++DG+LDD + + GS+++ E        + Y N   W+ GR
Sbjct: 94  SYDGSLDDDSPVHGSAVSFEVGDFLHIKEKYDN--NWWIGR 132


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = +2

Query: 257 SSIT-VEPVPL--PATCKPYSNGPGWFTGRYSCSSI 355
           S IT V P+P   P+   PY+N PG+++    C+ +
Sbjct: 317 SGITGVPPIPADGPSPAGPYTNVPGFYSFGEVCAKL 352


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -2

Query: 414 VQVQRLIQEHFDDQITSFDMIE 349
           V +QR+++ +F+D++  FD  E
Sbjct: 654 VGLQRMLRSYFEDRVLYFDTSE 675


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 282 HCQQHASPTATDLAGSLVAIRVLQSCQ 362
           H   H  PTA DLAG      V+Q+ +
Sbjct: 506 HHHHHHHPTAADLAGYHHQHNVIQAAK 532


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 765,910
Number of Sequences: 2352
Number of extensions: 17171
Number of successful extensions: 78
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)