Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0935
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.100
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    23   2.1  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   2.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   2.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 0.100
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -1

Query: 117 NANIFYKLCIYNYTHYLYLIHTLKYLYSLFIV 22
           N ++ + LC+  +T +L  +  + Y YS FI+
Sbjct: 190 NMHLLFLLCLDYFTLHLLFLPCIYYFYSAFII 221



 Score = 25.4 bits (53), Expect = 0.40
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -1

Query: 111 NIFYKLCIYNYTHYLYLIHTLKYLYSLFIV 22
           ++ + LCIY +   L+ +  + Y Y  FI+
Sbjct: 126 HLLFLLCIYYFVVPLFFLLCIYYFYCAFII 155



 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/29 (24%), Positives = 15/29 (51%)
 Frame = -1

Query: 108 IFYKLCIYNYTHYLYLIHTLKYLYSLFIV 22
           + + LC Y + +   ++  + Y Y  FI+
Sbjct: 94  VHFLLCTYYFYYAFIILLCVYYFYYAFII 122


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 196 FASRINI*ILARHDNVYTK*FKLFYLTKRNTEMQMIKVHVH 318
           F  + NI  + RH+ +     KL   T +NT     +V VH
Sbjct: 105 FRLKFNISSIPRHEKLTAAEIKLTRETAKNTSHPFQRVLVH 145


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 417 IL*TLYFVDVNDFFADCKWYW 479
           I+  ++FV    ++  C WYW
Sbjct: 279 IIVLVFFVCWTPYYVMCIWYW 299


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 417 IL*TLYFVDVNDFFADCKWYW 479
           I+  ++FV    ++  C WYW
Sbjct: 279 IIVLVFFVCWTPYYVMCIWYW 299


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,003
Number of Sequences: 336
Number of extensions: 3623
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)