Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0934
(636 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 145 2e-35
03_01_0547 + 4093196-4093657,4094267-4095148 145 2e-35
03_01_0544 + 4082528-4082989,4083585-4084466 145 2e-35
03_01_0543 + 4076981-4077442,4078145-4079026 145 2e-35
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 97 1e-20
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 94 7e-20
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 90 1e-18
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 90 1e-18
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 89 3e-18
02_04_0462 + 23131433-23132836 62 3e-10
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 62 5e-10
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 32 0.44
03_05_0511 + 25056018-25059107 32 0.44
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 31 0.58
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 30 1.8
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 30 1.8
01_01_0016 - 88825-90411 30 1.8
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 29 2.3
04_01_0103 + 1082077-1082167,1083037-1085477 29 3.1
02_04_0148 - 20198407-20201424 29 3.1
02_04_0017 + 18937774-18937864,18938505-18940945 29 3.1
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 29 3.1
10_08_0169 - 15385393-15385583,15388078-15388648 29 4.1
05_04_0116 + 18131510-18133192 29 4.1
01_06_0662 + 30987187-30987277,30987825-30990214 29 4.1
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 28 5.4
06_01_0501 - 3587390-3587528,3587922-3588031,3588122-3588187,358... 28 5.4
03_04_0206 - 18493178-18495310 28 5.4
03_01_0090 + 718746-719998,720089-720161,720198-720254 28 5.4
12_02_0856 + 23708234-23708420,23709364-23709567,23709689-237099... 28 7.1
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 28 7.1
04_04_0214 - 23674270-23676858,23677574-23680843,23680941-236811... 28 7.1
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 145 bits (352), Expect = 2e-35
Identities = 72/110 (65%), Positives = 84/110 (76%)
Frame = +2
Query: 257 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 436
GHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I N
Sbjct: 94 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCN 153
Query: 437 KMDSTEPPYSEPRFEEIKKEVSSYSRRLATTQLLSLSCPFLDGHGDNMLE 586
KMD+T P YS+ R++EI KEVSSY +++ P GDNM+E
Sbjct: 154 KMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIE 203
Score = 115 bits (276), Expect = 4e-26
Identities = 54/60 (90%), Positives = 55/60 (91%)
Frame = +1
Query: 1 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 180
INIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAER
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAER 67
Score = 48.4 bits (110), Expect = 5e-06
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +3
Query: 186 GITIDIALWKFETSKYYVTIIDA 254
GITIDIALWKFET+KYY T+IDA
Sbjct: 70 GITIDIALWKFETTKYYCTVIDA 92
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 145 bits (352), Expect = 2e-35
Identities = 72/110 (65%), Positives = 84/110 (76%)
Frame = +2
Query: 257 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 436
GHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I N
Sbjct: 94 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCN 153
Query: 437 KMDSTEPPYSEPRFEEIKKEVSSYSRRLATTQLLSLSCPFLDGHGDNMLE 586
KMD+T P YS+ R++EI KEVSSY +++ P GDNM+E
Sbjct: 154 KMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIE 203
Score = 115 bits (276), Expect = 4e-26
Identities = 54/60 (90%), Positives = 55/60 (91%)
Frame = +1
Query: 1 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 180
INIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAER
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAER 67
Score = 48.4 bits (110), Expect = 5e-06
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +3
Query: 186 GITIDIALWKFETSKYYVTIIDA 254
GITIDIALWKFET+KYY T+IDA
Sbjct: 70 GITIDIALWKFETTKYYCTVIDA 92
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 145 bits (352), Expect = 2e-35
Identities = 72/110 (65%), Positives = 84/110 (76%)
Frame = +2
Query: 257 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 436
GHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I N
Sbjct: 94 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCN 153
Query: 437 KMDSTEPPYSEPRFEEIKKEVSSYSRRLATTQLLSLSCPFLDGHGDNMLE 586
KMD+T P YS+ R++EI KEVSSY +++ P GDNM+E
Sbjct: 154 KMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIE 203
Score = 115 bits (276), Expect = 4e-26
Identities = 54/60 (90%), Positives = 55/60 (91%)
Frame = +1
Query: 1 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 180
INIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAER
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAER 67
Score = 48.4 bits (110), Expect = 5e-06
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +3
Query: 186 GITIDIALWKFETSKYYVTIIDA 254
GITIDIALWKFET+KYY T+IDA
Sbjct: 70 GITIDIALWKFETTKYYCTVIDA 92
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 145 bits (352), Expect = 2e-35
Identities = 72/110 (65%), Positives = 84/110 (76%)
Frame = +2
Query: 257 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 436
GHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I N
Sbjct: 94 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCN 153
Query: 437 KMDSTEPPYSEPRFEEIKKEVSSYSRRLATTQLLSLSCPFLDGHGDNMLE 586
KMD+T P YS+ R++EI KEVSSY +++ P GDNM+E
Sbjct: 154 KMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIE 203
Score = 115 bits (276), Expect = 4e-26
Identities = 54/60 (90%), Positives = 55/60 (91%)
Frame = +1
Query: 1 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 180
INIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAER
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAER 67
Score = 48.4 bits (110), Expect = 5e-06
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +3
Query: 186 GITIDIALWKFETSKYYVTIIDA 254
GITIDIALWKFET+KYY T+IDA
Sbjct: 70 GITIDIALWKFETTKYYCTVIDA 92
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 97.1 bits (231), Expect = 1e-20
Identities = 44/86 (51%), Positives = 61/86 (70%)
Frame = +2
Query: 257 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 436
GH+ ++ NMI+G SQAD VL+++A GEFE G K GQTREH LLA TLGV +LIV +N
Sbjct: 85 GHKSYVPNMISGASQADIGVLVISARKGEFETGYEKGGQTREHVLLAKTLGVAKLIVVIN 144
Query: 437 KMDSTEPPYSEPRFEEIKKEVSSYSR 514
KMD +S+ R++EI+ ++ + R
Sbjct: 145 KMDEPTVKWSKERYDEIESKMVPFLR 170
Score = 51.2 bits (117), Expect = 7e-07
Identities = 21/51 (41%), Positives = 36/51 (70%)
Frame = +1
Query: 28 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 180
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEER 54
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 94.3 bits (224), Expect = 7e-20
Identities = 41/78 (52%), Positives = 58/78 (74%)
Frame = +2
Query: 257 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 436
GH+ ++ NMI+G SQAD VL+++A GEFE G + GQTREH LLA TLGV +L+V +N
Sbjct: 40 GHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVLLAKTLGVSKLVVVIN 99
Query: 437 KMDSTEPPYSEPRFEEIK 490
KMD + +S+ R++EI+
Sbjct: 100 KMDESTVGWSKERYDEIE 117
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 90.2 bits (214), Expect = 1e-18
Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 5/91 (5%)
Frame = +2
Query: 257 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN-----GQTREHALLAFTLGVKQL 421
GH+DF+ NMI+G +QAD A+L+V A TG FEAG+ GQT+EHA L + GV+QL
Sbjct: 334 GHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQL 393
Query: 422 IVGVNKMDSTEPPYSEPRFEEIKKEVSSYSR 514
IV VNKMD+ YS+ RFE IK ++ S+ R
Sbjct: 394 IVAVNKMDAI--GYSKERFEFIKVQLGSFLR 422
Score = 76.6 bits (180), Expect = 2e-14
Identities = 32/60 (53%), Positives = 44/60 (73%)
Frame = +1
Query: 1 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 180
+N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+ ER
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEER 307
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 90.2 bits (214), Expect = 1e-18
Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 5/91 (5%)
Frame = +2
Query: 257 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN-----GQTREHALLAFTLGVKQL 421
GH+DF+ NMI+G +QAD A+L+V A TG FEAG+ GQT+EHA L + GV+QL
Sbjct: 334 GHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQL 393
Query: 422 IVGVNKMDSTEPPYSEPRFEEIKKEVSSYSR 514
IV VNKMD+ YS+ RFE IK ++ S+ R
Sbjct: 394 IVAVNKMDAI--GYSKERFEFIKVQLGSFLR 422
Score = 76.6 bits (180), Expect = 2e-14
Identities = 32/60 (53%), Positives = 44/60 (73%)
Frame = +1
Query: 1 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 180
+N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+ ER
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEER 307
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 89.0 bits (211), Expect = 3e-18
Identities = 44/88 (50%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
Frame = +2
Query: 257 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN--GQTREHALLAFTLGVKQLIVG 430
GH+DF+ NMI+G +Q+D A+L++ A G FEAG+ N GQT+EH+ L + GV LIV
Sbjct: 321 GHKDFVPNMISGATQSDAAILVIDASIGSFEAGMGINGIGQTKEHSQLVRSFGVDNLIVV 380
Query: 431 VNKMDSTEPPYSEPRFEEIKKEVSSYSR 514
VNKMDS E YS+ RF IK ++ ++ R
Sbjct: 381 VNKMDSVE--YSKERFNFIKSQLGAFLR 406
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 124 MGKGSFKYAWVLDKLKAER 180
+GKGSF YAW +D+ ER
Sbjct: 276 IGKGSFAYAWAMDESADER 294
>02_04_0462 + 23131433-23132836
Length = 467
Score = 62.5 bits (145), Expect = 3e-10
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +2
Query: 242 HH*CSGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 421
H C GH D++KNMITG +Q D A+L+V+ G QT+EH LLA +GV ++
Sbjct: 137 HVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPKI 189
Query: 422 IVGVNKMDSTEPPYSEPRFE-EIKKEVSSY 508
+V +NK D + E E+++ +SSY
Sbjct: 190 VVFLNKKDQVDDEELLQLVELEVRELLSSY 219
Score = 31.1 bits (67), Expect = 0.77
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +1
Query: 1 INIVVIGHVDSGKSTTTGHL---IYKCGGIDKRTIEKFEKEAQEMGKG 135
+NI IGHVD GK+T T L + GG + ++ + +E +G
Sbjct: 71 VNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARG 118
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/73 (42%), Positives = 44/73 (60%)
Frame = +2
Query: 242 HH*CSGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 421
H C GH D++KNMITG +Q D +L+V+A G QT+EH LLA +GV L
Sbjct: 134 HVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMP-------QTKEHILLARQVGVPSL 186
Query: 422 IVGVNKMDSTEPP 460
+ +NK+D+ + P
Sbjct: 187 VCFLNKVDAVDDP 199
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +1
Query: 1 INIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 135
+N+ IGHVD GK+T T ++ + G ++ +K +E +G
Sbjct: 68 VNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARG 115
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/81 (25%), Positives = 37/81 (45%)
Frame = +2
Query: 251 CSGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVG 430
C GH + M+ G + D A+L++AA QT EH + ++ +I+
Sbjct: 155 CPGHDILMATMLNGAAIMDGALLLIAANES------CPQPQTSEHLAAVEIMRLQHIIIL 208
Query: 431 VNKMDSTEPPYSEPRFEEIKK 493
NK+D + + + E I+K
Sbjct: 209 QNKIDLIQEGAAMNQHEAIQK 229
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.9 bits (69), Expect = 0.44
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 4 NIVVIGHVDSGKSTTTGHLIYKCG 75
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 4 NIVVIGHVDSGKSTTTGHLIYKCG 75
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 10 VVIGHVDSGKSTTTGHLIYKCG 75
V++ H+D+GK+TTT ++Y G
Sbjct: 108 VIMAHIDAGKTTTTERVLYYTG 129
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 4 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 102
N +I H+D GKST L+ G + KR +++
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKREMKQ 111
>01_01_0016 - 88825-90411
Length = 528
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/72 (27%), Positives = 31/72 (43%)
Frame = -3
Query: 427 YDELFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRAS 248
YD F + +G+L L+V+ F+ TGT + D+H A + V D RA
Sbjct: 241 YDAAF--RDHARRGLLPALSVIEPRYFDLTGTPADDDHPAHDVANGQRLVKDVYEALRAG 298
Query: 247 MMVT*YLLVSNF 212
LL+ +
Sbjct: 299 PQWNHTLLIITY 310
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 4 NIVVIGHVDSGKSTTTGHLIYKCGGI 81
NI + H+DSGK+T T ++Y G I
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRI 95
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 4 NIVVIGHVDSGKSTTTGHLIYKCG 75
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 4 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 126
N ++ HVD GK++ HLI G ++R E+ A+ M
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS-ERRVSERMAGSARVM 57
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 4 NIVVIGHVDSGKSTTTGHLIYKCG 75
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>01_06_0548 -
30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 4 NIVVIGHVDSGKSTTTGHLIYKCG 75
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>10_08_0169 - 15385393-15385583,15388078-15388648
Length = 253
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -1
Query: 90 TFVNTTTFVDQVTSGGGLAGVDVSDD 13
TFVNT + Q+TS GG GV DD
Sbjct: 52 TFVNTESVHRQITSSGGGHGVGGGDD 77
>05_04_0116 + 18131510-18133192
Length = 560
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = -1
Query: 483 SSNLGSLYGGSVE-SILFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPA---ATMS 316
+S G GGS+ S+ P S T V S P + PA+ +P PA ATM+
Sbjct: 66 ASGSGEGQGGSMSLSLQLRPLGSTPTAAVAVSVPPMAAAPMMAGPAAAAPAPAPPLATMA 125
Query: 315 TAQSA 301
AQ+A
Sbjct: 126 VAQNA 130
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 4 NIVVIGHVDSGKSTTTGHLIYKCG 75
N+ V+ HVD GKST T L+ G
Sbjct: 21 NMSVVAHVDHGKSTLTDSLVAAAG 44
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 493 LLDFLKSGLTVWWFSGIHFVY 431
+L+ GL VW GIHFVY
Sbjct: 234 ILEIKTGGLVVWTRGGIHFVY 254
>06_01_0501 -
3587390-3587528,3587922-3588031,3588122-3588187,
3588293-3588410,3588499-3588554,3588647-3588766,
3588937-3589035,3589443-3589490,3589534-3589545,
3590353-3590418,3591412-3591471,3592061-3592162,
3592405-3592426,3592959-3593041,3593166-3593293,
3593775-3593881,3594376-3594845
Length = 601
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 187 PTHAQPLVCPIPKHI*RILYPFPGPPSRTSRWY 89
PT PL+ P P + +L PF P+R+ WY
Sbjct: 41 PTTRAPLL-PSPPRLPPLLVPFAAVPARSFSWY 72
>03_04_0206 - 18493178-18495310
Length = 710
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 431 VNKMDSTEPPYSEPRFEEIKKEV 499
VNK D T Y + EEIKKEV
Sbjct: 686 VNKFDGTFEDYKDELLEEIKKEV 708
>03_01_0090 + 718746-719998,720089-720161,720198-720254
Length = 460
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -1
Query: 636 LTLHXPSLETKAFWLKGSNMLSPCPSRNGHESDSSWVVANLLEYEDTSFLISSNLG 469
L L P LE WL +++ CP+ + SDS + +L+E + +I+ + G
Sbjct: 261 LQLDPPELEGMEPWLPPPTLIAKCPANTVNTSDSRFY--HLVECDSEVLVIALSAG 314
>12_02_0856 +
23708234-23708420,23709364-23709567,23709689-23709918,
23710174-23710174,23710268-23710788
Length = 380
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 570 PCPSRNGHESDSSWVVANLLEYED 499
P PS +G +SD SW V++ E E+
Sbjct: 31 PTPSDDGEDSDDSWAVSDEEEEEE 54
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 4 NIVVIGHVDSGKSTTTGHLIYKCGGIDK 87
N +I HVD GKST L+ G I K
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK 86
>04_04_0214 -
23674270-23676858,23677574-23680843,23680941-23681119,
23681200-23681559,23681645-23682086,23682199-23682332,
23682479-23682680
Length = 2391
Score = 27.9 bits (59), Expect = 7.1
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 125 WVKDPSNMLGYWTN*RLSVXXYHNR 199
W+ PS+ +GYW N +S + N+
Sbjct: 876 WISSPSSGVGYWGNSEMSQRTFFNQ 900
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,622,913
Number of Sequences: 37544
Number of extensions: 401688
Number of successful extensions: 1281
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1270
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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