Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0934
(636 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 187 9e-50
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 187 9e-50
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 187 9e-50
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 184 8e-49
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.47
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.1
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 7.6
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 187 bits (455), Expect = 9e-50
Identities = 91/110 (82%), Positives = 94/110 (85%)
Frame = +2
Query: 257 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 436
GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN
Sbjct: 21 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 80
Query: 437 KMDSTEPPYSEPRFEEIKKEVSSYSRRLATTQLLSLSCPFLDGHGDNMLE 586
KMDSTEPPYSE RFEEIKKEVSSY +++ P HGDNMLE
Sbjct: 81 KMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 130
Score = 55.2 bits (127), Expect = 5e-10
Identities = 27/43 (62%), Positives = 30/43 (69%)
Frame = +1
Query: 508 LKKIGYNPAAVAFVPISGWARRQHVGAFQPKCLGFKGWXVERK 636
+KKIGYNPAAVAFVPISGW ++ K FKGW VERK
Sbjct: 105 IKKIGYNPAAVAFVPISGW-HGDNMLEVSSKMPWFKGWTVERK 146
Score = 44.4 bits (100), Expect = 9e-07
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 198 DIALWKFETSKYYVTIIDA 254
DIALWKFETSKYYVTIIDA
Sbjct: 1 DIALWKFETSKYYVTIIDA 19
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = +3
Query: 588 LSTKMPWFQG 617
+S+KMPWF+G
Sbjct: 131 VSSKMPWFKG 140
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 187 bits (455), Expect = 9e-50
Identities = 91/110 (82%), Positives = 94/110 (85%)
Frame = +2
Query: 257 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 436
GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN
Sbjct: 37 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 96
Query: 437 KMDSTEPPYSEPRFEEIKKEVSSYSRRLATTQLLSLSCPFLDGHGDNMLE 586
KMDSTEPPYSE RFEEIKKEVSSY +++ P HGDNMLE
Sbjct: 97 KMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 146
Score = 55.2 bits (127), Expect = 5e-10
Identities = 27/43 (62%), Positives = 30/43 (69%)
Frame = +1
Query: 508 LKKIGYNPAAVAFVPISGWARRQHVGAFQPKCLGFKGWXVERK 636
+KKIGYNPAAVAFVPISGW ++ K FKGW VERK
Sbjct: 121 IKKIGYNPAAVAFVPISGW-HGDNMLEVSSKMPWFKGWTVERK 162
Score = 52.0 bits (119), Expect = 5e-09
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +3
Query: 186 GITIDIALWKFETSKYYVTIIDA 254
GITIDIALWKFETSKYYVTIIDA
Sbjct: 13 GITIDIALWKFETSKYYVTIIDA 35
Score = 25.4 bits (53), Expect = 0.47
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 151 WVLDKLKAER 180
WVLDKLKAER
Sbjct: 1 WVLDKLKAER 10
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = +3
Query: 588 LSTKMPWFQG 617
+S+KMPWF+G
Sbjct: 147 VSSKMPWFKG 156
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 187 bits (455), Expect = 9e-50
Identities = 91/110 (82%), Positives = 94/110 (85%)
Frame = +2
Query: 257 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 436
GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN
Sbjct: 94 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 153
Query: 437 KMDSTEPPYSEPRFEEIKKEVSSYSRRLATTQLLSLSCPFLDGHGDNMLE 586
KMDSTEPPYSE RFEEIKKEVSSY +++ P HGDNMLE
Sbjct: 154 KMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 203
Score = 130 bits (314), Expect = 1e-32
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = +1
Query: 1 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 180
INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 67
Score = 55.2 bits (127), Expect = 5e-10
Identities = 27/43 (62%), Positives = 30/43 (69%)
Frame = +1
Query: 508 LKKIGYNPAAVAFVPISGWARRQHVGAFQPKCLGFKGWXVERK 636
+KKIGYNPAAVAFVPISGW ++ K FKGW VERK
Sbjct: 178 IKKIGYNPAAVAFVPISGW-HGDNMLEVSSKMPWFKGWTVERK 219
Score = 52.4 bits (120), Expect = 4e-09
Identities = 28/57 (49%), Positives = 36/57 (63%)
Frame = +3
Query: 84 QTYHREVREGGPGNG*RILQICLGIGQTKG*AXVGITIDIALWKFETSKYYVTIIDA 254
+ + +E +E G G+ + + + K GITIDIALWKFETSKYYVTIIDA
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDA 92
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = +3
Query: 588 LSTKMPWFQG 617
+S+KMPWF+G
Sbjct: 204 VSSKMPWFKG 213
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 184 bits (447), Expect = 8e-49
Identities = 89/111 (80%), Positives = 93/111 (83%)
Frame = +2
Query: 257 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 436
GHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNGQTREHALLAFTLGVKQLIVGVN
Sbjct: 94 GHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 153
Query: 437 KMDSTEPPYSEPRFEEIKKEVSSYSRRLATTQLLSLSCPFLDGHGDNMLEP 589
KMD T+PPYSE RFEEIKKEVSSY +++ P HGDNMLEP
Sbjct: 154 KMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVPISGWHGDNMLEP 204
Score = 130 bits (314), Expect = 1e-32
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = +1
Query: 1 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 180
INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 67
Score = 51.6 bits (118), Expect = 6e-09
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +1
Query: 508 LKKIGYNPAAVAFVPISGWARRQHVGAFQPKCLGFKGWXVERK 636
+KKIGYN A+VAFVPISGW ++ PK +KGW VERK
Sbjct: 178 IKKIGYNTASVAFVPISGW-HGDNMLEPSPKTPWYKGWKVERK 219
Score = 51.2 bits (117), Expect = 8e-09
Identities = 27/57 (47%), Positives = 36/57 (63%)
Frame = +3
Query: 84 QTYHREVREGGPGNG*RILQICLGIGQTKG*AXVGITIDIALWKFETSKYYVTIIDA 254
+ + +E +E G G+ + + + K GITIDIALWKFET+KYYVTIIDA
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDA 92
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 25.4 bits (53), Expect = 0.47
Identities = 24/78 (30%), Positives = 33/78 (42%)
Frame = +2
Query: 257 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 436
GH FI G D VL+VAA G E QT + +A V +IV +N
Sbjct: 202 GHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV-PIIVAIN 253
Query: 437 KMDSTEPPYSEPRFEEIK 490
K+D + ++E K
Sbjct: 254 KIDKPNIDIIKVQYELAK 271
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 7 IVVIGHVDSGKST 45
+ ++GHVD GK+T
Sbjct: 148 VTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 1 INIVVIGHVDSGKST 45
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 441 WIPLNHHTVSPDLRKSRRKY 500
W+P+N + S +L +R+Y
Sbjct: 443 WLPVNENYKSLNLAAQKREY 462
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,539
Number of Sequences: 438
Number of extensions: 3925
Number of successful extensions: 36
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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