Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0934
(636 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 145 2e-35
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 145 2e-35
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 145 2e-35
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 145 2e-35
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 93 1e-19
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 87 7e-18
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 62 3e-10
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 59 3e-09
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 35 0.039
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 35 0.039
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 34 0.069
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 33 0.12
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 33 0.16
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.21
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 31 0.48
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 29 2.6
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.6
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 28 4.5
At4g20430.1 68417.m02981 subtilase family protein contains Pfam ... 28 4.5
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 28 6.0
At1g53840.1 68414.m06128 pectinesterase family protein contains ... 28 6.0
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 28 6.0
At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase fa... 28 6.0
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 27 7.9
At3g54760.1 68416.m06059 dentin sialophosphoprotein-related cont... 27 7.9
At3g44820.1 68416.m04829 phototropic-responsive NPH3 family prot... 27 7.9
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 145 bits (351), Expect = 2e-35
Identities = 72/110 (65%), Positives = 84/110 (76%)
Frame = +2
Query: 257 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 436
GHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I N
Sbjct: 94 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCN 153
Query: 437 KMDSTEPPYSEPRFEEIKKEVSSYSRRLATTQLLSLSCPFLDGHGDNMLE 586
KMD+T P YS+ R++EI KEVSSY +++ P GDNM+E
Sbjct: 154 KMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIE 203
Score = 115 bits (276), Expect = 3e-26
Identities = 54/60 (90%), Positives = 55/60 (91%)
Frame = +1
Query: 1 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 180
INIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAER
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAER 67
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +3
Query: 186 GITIDIALWKFETSKYYVTIIDA 254
GITIDIALWKFET+KYY T+IDA
Sbjct: 70 GITIDIALWKFETTKYYCTVIDA 92
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 145 bits (351), Expect = 2e-35
Identities = 72/110 (65%), Positives = 84/110 (76%)
Frame = +2
Query: 257 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 436
GHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I N
Sbjct: 94 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCN 153
Query: 437 KMDSTEPPYSEPRFEEIKKEVSSYSRRLATTQLLSLSCPFLDGHGDNMLE 586
KMD+T P YS+ R++EI KEVSSY +++ P GDNM+E
Sbjct: 154 KMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIE 203
Score = 115 bits (276), Expect = 3e-26
Identities = 54/60 (90%), Positives = 55/60 (91%)
Frame = +1
Query: 1 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 180
INIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAER
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAER 67
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +3
Query: 186 GITIDIALWKFETSKYYVTIIDA 254
GITIDIALWKFET+KYY T+IDA
Sbjct: 70 GITIDIALWKFETTKYYCTVIDA 92
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 145 bits (351), Expect = 2e-35
Identities = 72/110 (65%), Positives = 84/110 (76%)
Frame = +2
Query: 257 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 436
GHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I N
Sbjct: 94 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCN 153
Query: 437 KMDSTEPPYSEPRFEEIKKEVSSYSRRLATTQLLSLSCPFLDGHGDNMLE 586
KMD+T P YS+ R++EI KEVSSY +++ P GDNM+E
Sbjct: 154 KMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIE 203
Score = 115 bits (276), Expect = 3e-26
Identities = 54/60 (90%), Positives = 55/60 (91%)
Frame = +1
Query: 1 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 180
INIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAER
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAER 67
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +3
Query: 186 GITIDIALWKFETSKYYVTIIDA 254
GITIDIALWKFET+KYY T+IDA
Sbjct: 70 GITIDIALWKFETTKYYCTVIDA 92
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 145 bits (351), Expect = 2e-35
Identities = 72/110 (65%), Positives = 84/110 (76%)
Frame = +2
Query: 257 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 436
GHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I N
Sbjct: 94 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCN 153
Query: 437 KMDSTEPPYSEPRFEEIKKEVSSYSRRLATTQLLSLSCPFLDGHGDNMLE 586
KMD+T P YS+ R++EI KEVSSY +++ P GDNM+E
Sbjct: 154 KMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIE 203
Score = 115 bits (276), Expect = 3e-26
Identities = 54/60 (90%), Positives = 55/60 (91%)
Frame = +1
Query: 1 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 180
INIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAER
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAER 67
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +3
Query: 186 GITIDIALWKFETSKYYVTIIDA 254
GITIDIALWKFET+KYY T+IDA
Sbjct: 70 GITIDIALWKFETTKYYCTVIDA 92
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 93.1 bits (221), Expect = 1e-19
Identities = 42/81 (51%), Positives = 59/81 (72%)
Frame = +2
Query: 257 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 436
GH+ ++ NMI+G SQAD VL+++A GEFE G + GQTREH LA TLGV +LIV VN
Sbjct: 188 GHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLIVVVN 247
Query: 437 KMDSTEPPYSEPRFEEIKKEV 499
KMD +S+ R++EI++++
Sbjct: 248 KMDDPTVNWSKERYDEIEQKM 268
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/60 (43%), Positives = 43/60 (71%)
Frame = +1
Query: 1 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 180
+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D + ER
Sbjct: 102 LNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTNEEER 161
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 87.4 bits (207), Expect = 7e-18
Identities = 43/85 (50%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK-NGQTREHALLAFTLGVKQLIVGV 433
GH+DF+ NMI G +QAD A+L++ A G FEAG GQTREHA + GV+Q+IV +
Sbjct: 326 GHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQTREHARVLRGFGVEQVIVAI 385
Query: 434 NKMDSTEPPYSEPRFEEIKKEVSSY 508
NKMD YS+ RF+ IK+ V S+
Sbjct: 386 NKMDIV--GYSKERFDLIKQHVGSF 408
Score = 74.9 bits (176), Expect = 4e-14
Identities = 31/60 (51%), Positives = 44/60 (73%)
Frame = +1
Query: 1 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 180
+N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+ ER
Sbjct: 240 LNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAEER 299
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 62.1 bits (144), Expect = 3e-10
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 2/131 (1%)
Frame = +2
Query: 242 HH*CSGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 421
H C GH D++KNMITG +Q D A+L+V+ G QT+EH LLA +GV +
Sbjct: 146 HVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPDM 198
Query: 422 IVGVNKMDSTEPPYSEPRFE-EIKKEVSSYSRRLATTQLLSLSCPFLDGHGDNMLEPFNQ 598
+V +NK D + E E+++ +SSY + P + G +E +
Sbjct: 199 VVFLNKEDQVDDAELLELVELEVRELLSSY-------EFNGDDIPIISGSALLAVETLTE 251
Query: 599 NALVSR-DGXW 628
N V R D W
Sbjct: 252 NPKVKRGDNKW 262
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 1 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 111
+NI IGHVD GK+T T L I +K+++
Sbjct: 80 VNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 58.8 bits (136), Expect = 3e-09
Identities = 30/73 (41%), Positives = 42/73 (57%)
Frame = +2
Query: 242 HH*CSGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 421
H C GH D++KNMITG +Q D +L+V+ G QT+EH LLA +GV L
Sbjct: 134 HVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHILLARQVGVPSL 186
Query: 422 IVGVNKMDSTEPP 460
+ +NK+D + P
Sbjct: 187 VCFLNKVDVVDDP 199
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 35.1 bits (77), Expect = 0.039
Identities = 26/101 (25%), Positives = 45/101 (44%)
Frame = +2
Query: 203 CSLEVRN*QVLCYHH*CSGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 382
C + +R V C C GH + M+ G + D A+L++AA QT E
Sbjct: 121 CKMTLRR-HVSCVD--CPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAE 171
Query: 383 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 505
H + +K +I+ NK+D + + E I+K +++
Sbjct: 172 HLASVDMMRLKHIIILQNKIDLINEKAATEQHEAIQKFITN 212
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 35.1 bits (77), Expect = 0.039
Identities = 26/101 (25%), Positives = 45/101 (44%)
Frame = +2
Query: 203 CSLEVRN*QVLCYHH*CSGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 382
C + +R V C C GH + M+ G + D A+L++AA QT E
Sbjct: 121 CKMTLRR-HVSCVD--CPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAE 171
Query: 383 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 505
H + +K +I+ NK+D + + E I+K +++
Sbjct: 172 HLASVDMMRLKHIIILQNKIDLINEKAATEQHEAIQKFITN 212
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 34.3 bits (75), Expect = 0.069
Identities = 22/85 (25%), Positives = 41/85 (48%)
Frame = +2
Query: 251 CSGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVG 430
C GH + M+ G + D A+LI+AA QT EH + +K +I+
Sbjct: 126 CPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHLKDIIII 179
Query: 431 VNKMDSTEPPYSEPRFEEIKKEVSS 505
NK+D + + + E+I++ +++
Sbjct: 180 QNKIDLIQENEAIKQHEDIQRFITN 204
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 33.5 bits (73), Expect = 0.12
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +2
Query: 251 CSGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 427
C GH D+ + T Q +C + L+V TG F +KNG R+ LG + +
Sbjct: 228 CKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELENL 287
Query: 428 GVNKMDSTEPPYSEPRFE-EIKKEV 499
+DS E E R E + KEV
Sbjct: 288 STFTLDSDEE--DEVREESNVAKEV 310
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 33.1 bits (72), Expect = 0.16
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +2
Query: 251 CSGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVG 430
C GH + M+ G + D A+L++AA QT EH + +K +I+
Sbjct: 128 CPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSEHLAAVEIMQLKHIIIL 181
Query: 431 VNKMDSTEPPYSEPRFEEIKK 493
NK+D + + + E I+K
Sbjct: 182 QNKIDLIQENVAINQHEAIQK 202
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 4 NIVVIGHVDSGKSTTTGHLIYKCGG 78
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 31.5 bits (68), Expect = 0.48
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 4 NIVVIGHVDSGKSTTTGHLIYKCG 75
NI ++ H+D+GK+TTT ++Y G
Sbjct: 98 NIGIMAHIDAGKTTTTERILYYTG 121
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/31 (32%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -1
Query: 636 LTLHXPSL-ETKAFWLKGSNMLSPCPSRNGH 547
+T+H + + K+ W+ G+NM++ CP + G+
Sbjct: 80 VTIHWHGVFQLKSVWMDGANMITQCPIQPGY 110
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 4 NIVVIGHVDSGKSTTTGHLIYKCG 75
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 4 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 102
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
>At4g20430.1 68417.m02981 subtilase family protein contains Pfam
profile: PF00082 subtilase family
Length = 856
Score = 28.3 bits (60), Expect = 4.5
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = -3
Query: 418 LFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRASMMV 239
+FDT E L G+ F +TGT ++ IS GS D L I+VS+ +
Sbjct: 714 IFDTSFEDYMSFLCGINGSAPVVFNYTGTNCLRNNATIS--GS-DLNLPSITVSKLNNTR 770
Query: 238 T*YLLVSN 215
T L++N
Sbjct: 771 TVQRLMTN 778
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 4 NIVVIGHVDSGKSTTTGHLIYKCGGI 81
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g53840.1 68414.m06128 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 586
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 15 HRTRRLRQVHHHWSLDLQMW 74
HR RRL HH S+D + W
Sbjct: 247 HRRRRLMSHHHQQSVDFEKW 266
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 4 NIVVIGHVDSGKSTTTGHLIYKCGGI 81
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|Q9Y2Q0, SP|O43520], Mus musculus [SP|P98200,
SP|P70704], {Bos taurus} SP|Q29449; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1184
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 347 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 505
E+G +TR+H G++ LI+ ++D E R E K VS+
Sbjct: 629 ESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYEVFTERISEAKNSVSA 681
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 401 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYS 511
T GV++ G+ + +S PP S R E++ E S+++
Sbjct: 18 TAGVRRSYGGLPQSNSKSPPSSSQRLMELESEFSAHN 54
>At3g54760.1 68416.m06059 dentin sialophosphoprotein-related
contains weak similarity to Swiss-Prot:Q9NZW4 dentin
sialophosphoprotein precursor (Dentin phosphophoryn DPP,
Dentin sialoprotein DSP) [Homo sapiens]
Length = 792
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -1
Query: 63 DQVTSGGGLAGVDVSDDDNV 4
D+ + GGLA VDV DDD+V
Sbjct: 47 DKNPNDGGLATVDVDDDDDV 66
>At3g44820.1 68416.m04829 phototropic-responsive NPH3 family protein
contains NPH3 family domain, Pfam:PF03000
Length = 661
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 479 EEIKKEVSSYSRRLATTQLLSLSCPFLDGHGDNMLEPFNQNALVS 613
+E+KK VS S +++ +L+ L C FL + QN++ S
Sbjct: 589 QEMKKRVSKSSSSMSSPRLVKLGCKFLLPRASDAKNDTVQNSVSS 633
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,648,496
Number of Sequences: 28952
Number of extensions: 309758
Number of successful extensions: 1001
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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