Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0933
         (507 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   4.5  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   4.5  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   5.9  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 431  RAAKSKSFSPT*ADSLEQRSATRRPRSIXNAPLLD 327
            R A+S   SPT +   ++  +    R I N+PLL+
Sbjct: 1457 RLARSSPASPTPSKKSKRHQSASPIRHILNSPLLN 1491


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = +2

Query: 356 GGAALPTSVLD--YQLKXGKKTSIL 424
           GGA LPT VL+   Q    KKT I+
Sbjct: 920 GGAELPTEVLEELTQFTSKKKTGII 944


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -2

Query: 146 DRAFKTTK*CEIIIFFQYRTKLNDDSHLDNCLTT 45
           +R FKT    +  +     TK +   H DNC TT
Sbjct: 161 ERGFKTLASLQNHVNTHTGTKPHRCKHCDNCFTT 194


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 460,119
Number of Sequences: 2352
Number of extensions: 7575
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)