Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0929
         (631 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    22   4.3  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   9.9  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   9.9  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   9.9  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   9.9  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   9.9  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   9.9  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   9.9  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   9.9  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    21   9.9  

>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 351 SIFYILLGMSYATPWC*C*TYHYWS 425
           +IFY  + M    PW  C   +YW+
Sbjct: 84  AIFYFFMSMRSELPWGSC--NNYWN 106


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 157 RNLKIRNTFVKNSNQNFV 210
           +N+ I+NT  KN+ QN +
Sbjct: 176 QNIAIQNTQGKNNQQNIL 193


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +3

Query: 87  KEYYDWIRKYLKAVEQTQKLTELKKSKDQ 173
           +EY +  R+Y K   + +KL E + S+++
Sbjct: 10  REYREKNRRYEKLHNEKEKLLEERTSRNR 38


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +3

Query: 87  KEYYDWIRKYLKAVEQTQKLTELKKSKDQ 173
           +EY +  R+Y K   + +KL E + S+++
Sbjct: 10  REYREKNRRYEKLHNEKEKLLEERTSRNR 38


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +3

Query: 87  KEYYDWIRKYLKAVEQTQKLTELKKSKDQ 173
           +EY +  R+Y K   + +KL E + S+++
Sbjct: 10  REYREKNRRYEKLHNEKEKLLEERTSRNR 38


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +3

Query: 87  KEYYDWIRKYLKAVEQTQKLTELKKSKDQ 173
           +EY +  R+Y K   + +KL E + S+++
Sbjct: 10  REYREKNRRYEKLHNEKEKLLEERTSRNR 38


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +3

Query: 87  KEYYDWIRKYLKAVEQTQKLTELKKSKDQ 173
           +EY +  R+Y K   + +KL E + S+++
Sbjct: 10  REYREKNRRYEKLHNEKEKLLEERTSRNR 38


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +3

Query: 87  KEYYDWIRKYLKAVEQTQKLTELKKSKDQ 173
           +EY +  R+Y K   + +KL E + S+++
Sbjct: 10  REYREKNRRYEKLHNEKEKLLEERTSRNR 38


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +3

Query: 87  KEYYDWIRKYLKAVEQTQKLTELKKSKDQ 173
           +EY +  R+Y K   + +KL E + S+++
Sbjct: 10  REYREKNRRYEKLHNEKEKLLEERTSRNR 38


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 87  KEYYDWIRKYLKAVEQTQKLTELKKSK 167
           +EY +  R+Y K   + +KL E + S+
Sbjct: 10  REYKEKDRRYEKLYNEKEKLLEERTSR 36


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,175
Number of Sequences: 438
Number of extensions: 2309
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)