Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0928
(628 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15) 54 7e-08
SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0) 54 9e-08
SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022) 51 7e-07
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_9273| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 42 3e-04
SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 39 0.004
SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7) 38 0.007
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11) 37 0.012
SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 36 0.020
SB_8042| Best HMM Match : DUF803 (HMM E-Value=0) 36 0.027
SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 36 0.036
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 33 0.14
SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45) 33 0.14
SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11) 31 1.0
SB_47849| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_47328| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06) 29 4.1
SB_17274| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_43457| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_24715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_17662| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 55.6 bits (128), Expect = 3e-08
Identities = 28/82 (34%), Positives = 44/82 (53%)
Frame = +3
Query: 252 QANVVAVTKMTRIVLPEMVKREKGVVINIGSASSIIPSPLLTVYAATKAYVDKFSEGLDM 431
+ NV + +MT V+P M K+ G V+NIGS I+ +P +Y A+K V+ ++E +
Sbjct: 144 EPNVYGLMRMTNAVIPHMKKQRAGHVVNIGSVLGIVGTPFSEIYCASKFAVEGYAEAMAP 203
Query: 432 EYSKKGIVVQCILPGFVCSNMS 497
K I I PG V +N +
Sbjct: 204 VLGKFNIKTTIIEPGPVATNFA 225
>SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15)
Length = 355
Score = 54.4 bits (125), Expect = 7e-08
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +3
Query: 258 NVVAVTKMTRIVLPEMVKREKGVVINIGSASSIIPSPLLTVYAATKAYVDKFSEGLDMEY 437
N +AV +T+ VLP M++R+ G ++ S + I +P+ T Y ATK V + +GL +E
Sbjct: 161 NFLAVVSLTKAVLPHMIERKNGHIVVTSSVAGKIGAPMSTSYNATKFAVQGYFDGLRVEL 220
Query: 438 SKKGIVVQCILPG 476
K I V + PG
Sbjct: 221 FPKNIHVTLVCPG 233
>SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0)
Length = 1264
Score = 54.0 bits (124), Expect = 9e-08
Identities = 27/80 (33%), Positives = 47/80 (58%)
Frame = +3
Query: 258 NVVAVTKMTRIVLPEMVKREKGVVINIGSASSIIPSPLLTVYAATKAYVDKFSEGLDMEY 437
NV + +T+ LP ++K+ G ++N+ S + +P P L+ Y+A+K V FS+ L +E
Sbjct: 655 NVWGLLNVTKAFLP-LLKKSCGRIVNVASCAGKLPGPGLSAYSASKYAVQSFSDALRIEM 713
Query: 438 SKKGIVVQCILPGFVCSNMS 497
G+ V I PGF +N++
Sbjct: 714 RPFGVSVHIIDPGFFKTNLT 733
>SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022)
Length = 233
Score = 51.2 bits (117), Expect = 7e-07
Identities = 27/75 (36%), Positives = 42/75 (56%)
Frame = +3
Query: 252 QANVVAVTKMTRIVLPEMVKREKGVVINIGSASSIIPSPLLTVYAATKAYVDKFSEGLDM 431
+ N+ +MT+ LP ++KREKG V+NI S + ++P + Y +K V FS+ L
Sbjct: 66 EVNLWGTVRMTKAFLP-LLKREKGRVVNISSVAGMVPLQRSSAYCISKFGVSVFSDALRR 124
Query: 432 EYSKKGIVVQCILPG 476
E S G+ V + PG
Sbjct: 125 EMSPWGVGVVLVEPG 139
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +3
Query: 258 NVVAVTKMTRIVLPEMVKREKGVVINIGS-ASSIIPSPLLTVYAATKAYVDKFSEGLDME 434
NV ++ +MT+ +P+M ++ G +IN+ S ASSI +P Y +KA V F++ + +
Sbjct: 115 NVKSMFRMTKECIPKMRQQGSGSIINMASVASSIKGAPNRFAYGTSKAAVIGFTKAIAAD 174
Query: 435 YSKKGIVVQCILPGFV 482
Y KGI V + PG +
Sbjct: 175 YITKGIRVNAVCPGTI 190
>SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 47.6 bits (108), Expect = 8e-06
Identities = 26/73 (35%), Positives = 41/73 (56%)
Frame = +3
Query: 258 NVVAVTKMTRIVLPEMVKREKGVVINIGSASSIIPSPLLTVYAATKAYVDKFSEGLDMEY 437
N+ + +T+ LP +VK +G V+N+ S + I+ P + Y+ TK V+ FS+ L E
Sbjct: 51 NLWGLVDVTKTFLP-LVKMARGRVVNVSSIAGIVVVPSMAAYSITKYGVEAFSDALRREM 109
Query: 438 SKKGIVVQCILPG 476
S G+ V I PG
Sbjct: 110 SPWGVRVIIIEPG 122
>SB_9273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/79 (29%), Positives = 42/79 (53%)
Frame = +3
Query: 258 NVVAVTKMTRIVLPEMVKREKGVVINIGSASSIIPSPLLTVYAATKAYVDKFSEGLDMEY 437
N+ + +T+ LP +VKR +G ++N+ S + P + Y+ +K + FS+ + E
Sbjct: 47 NLWGLVDVTKTFLP-LVKRARGRIVNVTSIAGRFTLPFASPYSVSKYGAEAFSDAIRREL 105
Query: 438 SKKGIVVQCILPGFVCSNM 494
+ GI V + PGF + M
Sbjct: 106 APFGISVSIVEPGFFRTKM 124
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/61 (31%), Positives = 36/61 (59%)
Frame = +3
Query: 252 QANVVAVTKMTRIVLPEMVKREKGVVINIGSASSIIPSPLLTVYAATKAYVDKFSEGLDM 431
+ N ++V ++ ++VLP M K++ G +I + + + I+ P +Y ATK V+ F E +
Sbjct: 331 ETNTMSVIELVKVVLPVMKKQQDGRIIVVSNQAGIMGIPFHDIYCATKFAVEGFLESIAP 390
Query: 432 E 434
E
Sbjct: 391 E 391
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +3
Query: 258 NVVAVTKMTRIVLPEMVKREKGVVINIGSASSIIPSPLLTVYAATKAYVDKFSEGLDMEY 437
N V +M++ V+P M G +INI S + P +Y A+K V+ SE L
Sbjct: 115 NFFGVLRMSKAVIPRMKSDHSGHIINISSTAGHTGMPFTGLYCASKFAVEGLSESLAPLL 174
Query: 438 SKKGI 452
K G+
Sbjct: 175 RKFGV 179
>SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/72 (33%), Positives = 38/72 (52%)
Frame = +3
Query: 258 NVVAVTKMTRIVLPEMVKREKGVVINIGSASSIIPSPLLTVYAATKAYVDKFSEGLDMEY 437
N+ + +T+ LP +VK +G V+N+ S +I + L Y+ TK V+ FS+ L E
Sbjct: 21 NLWGLVDVTKTFLP-LVKMARGRVVNVSSIVGLIANELTAPYSITKYGVEAFSDVLRREM 79
Query: 438 SKKGIVVQCILP 473
G+ V I P
Sbjct: 80 LPWGVRVSIIEP 91
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/72 (33%), Positives = 37/72 (51%)
Frame = +3
Query: 258 NVVAVTKMTRIVLPEMVKREKGVVINIGSASSIIPSPLLTVYAATKAYVDKFSEGLDMEY 437
N+ + +T+ LP +VK +G V+N+ S +I L Y+ TK V+ FS+ L E
Sbjct: 187 NLWGLVDVTKTFLP-LVKMARGRVVNVASIVGLIAGELTAPYSITKYGVEAFSDVLRREM 245
Query: 438 SKKGIVVQCILP 473
G+ V I P
Sbjct: 246 LPWGVRVSIIEP 257
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +3
Query: 258 NVVAVTKMTRIVLPEMVKREKGVVINIGSASSIIPSPLLTVYAATKAYVDKFSEGLDMEY 437
N+ + +++ LP +VK +G V+N+ S +I + L Y+ TK V+ FS+ L E
Sbjct: 494 NLWGLVDVSKTFLP-LVKMARGRVVNVASTVGLIANELTAPYSITKYGVEAFSDVLRREM 552
Query: 438 SKKGIVVQCILP 473
G+ V I P
Sbjct: 553 FPWGVRVSIIEP 564
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +3
Query: 282 TRIVLPEMVKR-EKGVVINIGSASSIIPSPLLTVYAATKAYVDKFSEGLDMEYSKKGIVV 458
++I +MVK+ + G +INI S P P + Y A K + ++ + +E + I+V
Sbjct: 155 SQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALELVRHKILV 214
Query: 459 QCILPGFVCSNMSGI 503
+ PG + + M+G+
Sbjct: 215 NAVAPGAIATPMNGM 229
Score = 27.9 bits (59), Expect = 7.1
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 37 KATAEEIEKEYKVATKIIQADFSEDDKIYENIEKEIAGL-EIGTLVNNVGVSYTYPEYFL 213
K TA E+ + V +I+Q D + +EK I L I LVNN G P +
Sbjct: 77 KDTAREVVS-HGVRAEIVQLDLGNLPEGALALEKLIQRLGRIDVLVNNAGAMTKAPFLDM 135
Query: 214 DLPEWDKL 237
EW K+
Sbjct: 136 AFDEWRKI 143
>SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7)
Length = 133
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +3
Query: 258 NVVAVTKMTRIVLPEMVKREKGVVINIGSASSIIPSPLLTVYAATKAYVDKFSEGLDMEY 437
N+ + +T LP ++++ G V+NI S + + P Y+ TK V+ FS+ L E
Sbjct: 20 NLWGLIDVTLTFLP-LIRKCGGRVVNISSIAGRLSIPNTGPYSVTKYGVEAFSDALRREV 78
Query: 438 SKKGIVVQCILPG 476
S G+ V + PG
Sbjct: 79 SPWGVKVTLVEPG 91
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +3
Query: 258 NVVAVTKMTRIVLPEMVKREKGVVINIGSASSIIPSPLLTVYAATKAYVDKFSEGLDMEY 437
N+ V +++ LP +VK +G V+NI S + YA TK V+ FS+ + E
Sbjct: 286 NLWGVVDVSKTFLP-LVKMARGRVVNISSIYGFFSPIFGSHYAITKYGVEAFSDSMRREM 344
Query: 438 SKKGIVVQCILP 473
++ G+ V I P
Sbjct: 345 ARWGVRVSLIEP 356
>SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11)
Length = 305
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 261 VVAVTKMTRIVLPEMVKREKGVVINIGSASSIIPSPLLTVYAATKAYVDKFSEGLDMEYS 440
+V + + LP M+ + G V+NI S++ P + Y ++K F E L ME S
Sbjct: 176 IVFTLQTVKSFLPSMLAKNHGHVVNIASSAGFFGVPGMCDYCSSKFGAVGFDESLRMELS 235
Query: 441 ---KKGIVVQCILPGFVCSNM 494
K G+ + P ++ + M
Sbjct: 236 SLGKTGVKTTVVCPYYINTGM 256
>SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 258 NVVAVTKMTRIVLPEMVKREKGVVINIGSASSIIPSPLLTVYAATKAYVDKFSEGL 425
N V ++T+ V+P+M G +INI S I P +Y ++K V+ +E L
Sbjct: 308 NFFGVVRLTKAVIPKMKGNPSGHIINIPSIGGIRGVPFNAIYCSSKFAVEGMAESL 363
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 36.3 bits (80), Expect = 0.020
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 321 GVVINIGSASSIIPSPLLTV-YAATKAYVDKFSEGLDMEYSKKGIVVQCILPGFV 482
G ++N+ SA++ + +P + YAA K +D + GL E + GI V + PG +
Sbjct: 141 GAIVNLSSAAARLGAPGEYIDYAAVKGAIDSMTLGLAKEVAADGIRVNAVRPGVI 195
>SB_8042| Best HMM Match : DUF803 (HMM E-Value=0)
Length = 603
Score = 35.9 bits (79), Expect = 0.027
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 366 PLLTVYAATKAYVDKFSEGLDMEYSKKGIVVQCILPGFVCSN 491
P L +Y+ TK +V+ S+GL E + G+ V I PG S+
Sbjct: 217 PGLAIYSGTKFFVEALSQGLRQEIAGSGVKVTTIQPGIATSD 258
>SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +3
Query: 258 NVVAVTKMTRIVLPEMVKREKGVVINIGSASSIIPSPLLTVYAATKAYVDKFSEGLDME 434
N+ + +T+ LP ++K KG V+N S + + L Y+ TK V+ FS+ L E
Sbjct: 141 NLWGLIDVTKTFLP-LIKVAKGRVVNFSSIAGVATPALRAAYSVTKYGVESFSDALRRE 198
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 35.5 bits (78), Expect = 0.036
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 258 NVVAVTKMTRIVLPEMVKREKGVVINIGSASSIIPSPLLTVYAATKAYVDKFSEGLDME 434
N+ + R LP+M+K KGV++N S + Y ATK ++ + L ME
Sbjct: 111 NLKGSANVIRSFLPKMIKAGKGVIVNFSSGYGKAGKAKMAPYCATKWGIEGLTRALAME 169
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 33.5 bits (73), Expect = 0.14
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Frame = +3
Query: 258 NVVAVTKMTRIVLPEMVKR------EKGVVINIGSASSIIPSPLLTVYAATKAYVDKFSE 419
N V + R+V M E+GV++N+ S YAATK ++ +
Sbjct: 398 NAVGTFNVARLVAESMATNTPDQEGERGVIVNVSSIHGTEGQSGKVAYAATKGAINAMTL 457
Query: 420 GLDMEYSKKGIVVQCILPG 476
+ + +K GI V I PG
Sbjct: 458 PMARDLAKLGIRVNTISPG 476
>SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45)
Length = 620
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +3
Query: 309 KREKGVVINIGSASSIIPSPLLTVYAATKAYVDKFSEGLDMEYSKKGIVVQCILPGFVCS 488
K G +INI S + + YAA+KA V+ ++ +E ++ GI ILPGF+ +
Sbjct: 397 KINNGSIINISSIVAKSGNMGQANYAASKAGVEGLTKVCAIELARFGIRCNAILPGFIDT 456
Query: 489 NMS 497
M+
Sbjct: 457 PMT 459
>SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11)
Length = 236
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 258 NVVAVTKMTRIVLPEMVK-REKGVVINIGSASSIIPSPLLTVYAATKAYVDKFSEGLDME 434
N+ + R LP M++ + KGV++N S +P + Y TK ++ S+ L E
Sbjct: 116 NIKGTANVLRHFLPSMIEAKRKGVIVNFTSGWGRCVAPEVAPYCTTKWALEGLSKALAEE 175
>SB_47849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1922
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 34 LKATAEEIEKEYKVATKIIQADFSEDD 114
L+ TAEE EKEY A K+++ D DD
Sbjct: 1086 LRKTAEEGEKEYPEAAKVLKEDTYMDD 1112
>SB_47328| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1634
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 34 LKATAEEIEKEYKVATKIIQADFSEDD 114
L+ TAEE EKEY A K+++ D DD
Sbjct: 754 LRKTAEEGEKEYPEAAKVLKEDTYMDD 780
>SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06)
Length = 267
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Frame = +3
Query: 252 QANVVAVTKMTRIVLPEMVKRE------KGVVINIGSASSIIPSPLLTVYAATKAYVDKF 413
+ N + R+V +M+K E +GV+ N S ++ Y+A+K +
Sbjct: 125 KVNTTGSFNVIRLVAEQMIKNEPTEGGERGVITNTASVAAFDGQMGQAAYSASKGGIVGM 184
Query: 414 SEGLDMEYSKKGIVVQCILPG 476
+ + + ++ GI V I PG
Sbjct: 185 TLPIARDLARNGIRVNTIAPG 205
>SB_17274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 34 LKATAEEIEKEYKVATKIIQADFSEDD 114
L TAEE EKEY A K+++ D DD
Sbjct: 137 LLKTAEEGEKEYPEAAKVLKEDTYMDD 163
>SB_43457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 502 IPDMFEHTKPGRIHCTTIPFFEYSISRPS 416
IP+M P RIHC T +F S+ P+
Sbjct: 64 IPEMPSLVLPERIHCPTSLYFSQSLRNPN 92
>SB_24715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 324
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 505 VELAIRAHGQGLRPIGDQSSSATXPRNTGIPAPRGLSWNI 624
VE+ + AHG GLRP GD +G+ + + W++
Sbjct: 105 VEVGLFAHGFGLRP-GDVIHKVNDRECSGVQDTKNIFWSV 143
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 391 LRHTSISSRRVSIWSTRRRVSLYNVSYPVSC 483
LR T+ SRR+ +W R V+ N++ +C
Sbjct: 1780 LRKTACESRRILLWQIRTLVTCINMNGSAAC 1810
>SB_17662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 291 RCVSSLLQRPH*LDQSWDELIPLWQVQEIFRIRIGNSDIIDQSTD 157
RCV + +R + SWD+ + +W + R R D +QS D
Sbjct: 140 RCVMHIPERSQYISASWDKTVRIWNAFKNSRKR-STKDNKEQSED 183
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,095,362
Number of Sequences: 59808
Number of extensions: 402434
Number of successful extensions: 1089
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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