Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0928
         (628 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457554-1|AAL68784.1|  269|Anopheles gambiae salivary gland 1-l...    28   0.21 
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    26   1.1  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    26   1.1  
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    25   2.0  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   4.5  

>AF457554-1|AAL68784.1|  269|Anopheles gambiae salivary gland 1-like
           3 protein protein.
          Length = 269

 Score = 28.3 bits (60), Expect = 0.21
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +1

Query: 100 FSEDDKIYEN--IEKEIAGLEIGTLVNNVGVSYTYPEYFLDLPEWDKLIPTLIKLMWS 267
           +  D   YE   +E+ +A L+ GT    V  +  YPEYF  + E   L  TL K  WS
Sbjct: 117 YKPDHAQYEGKVVERWLAELQAGTFHEVVEFARDYPEYFARVEE--PLYETL-KQQWS 171


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 354 IIPSPLLTVYAATKAYVDKFSEGLDMEYSKKGI 452
           ++PS +  VY    A   +F+E  D++YS K +
Sbjct: 439 LVPSKVNDVYFLRMAVCSRFTEPADIDYSWKEV 471


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 354 IIPSPLLTVYAATKAYVDKFSEGLDMEYSKKGI 452
           ++PS +  VY    A   +F+E  D++YS K +
Sbjct: 470 LVPSKVNDVYFLRMAVCSRFTEPADIDYSWKEV 502


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +1

Query: 505 VELAIRAHGQGLRPIGDQSSSATXPRNTGIPAPRGLSWNI 624
           + + I  +G+G R +GD   +   P     P+P G   N+
Sbjct: 300 IVVGIATYGRGWRLVGDSGITGVPPIPADGPSPAGPYTNV 339


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 251 IRVGMSLSHSGRSKKYSGYV 192
           IRVG  + HS R+ KY G V
Sbjct: 696 IRVGDHVVHSSRTLKYLGMV 715


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,853
Number of Sequences: 2352
Number of extensions: 12512
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)