Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0925
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   3.3  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   7.5  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   7.5  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   7.5  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   10.0 
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   10.0 
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   10.0 
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   10.0 

>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 180 LWLSIIYIKCLDRREGPSRISLNNEI*LKSNI 275
           LW   + +  LD  E     SL+N   L+SN+
Sbjct: 774 LWADAVTLAILDFHESGFMESLDNHWILRSNV 805


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
          protein.
          Length = 169

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 70 LFVRSYVHGVTNTIIHT 20
          L V  YV G+ NT+ HT
Sbjct: 24 LVVGPYVIGLMNTMTHT 40


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
          protein.
          Length = 168

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 70 LFVRSYVHGVTNTIIHT 20
          L V  YV G+ NT+ HT
Sbjct: 23 LVVGPYVIGLMNTMTHT 39


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 382 FFL*WSHTVTMLLWY 338
           FF+ W+    M LWY
Sbjct: 269 FFICWTPYYVMSLWY 283


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 49  HGVTNTIIHT 20
           HG+TNT  HT
Sbjct: 76  HGLTNTASHT 85


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 49  HGVTNTIIHT 20
           HG+TNT  HT
Sbjct: 81  HGLTNTASHT 90


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 305 RPCTRVIIESVIPQ 346
           RPCT V   ++IPQ
Sbjct: 116 RPCTSVEEYAIIPQ 129


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 49  HGVTNTIIHT 20
           HG+TNT  HT
Sbjct: 81  HGLTNTASHT 90


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,979
Number of Sequences: 438
Number of extensions: 2565
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)