Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0923
         (669 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    36   1.2  
UniRef50_A3ZY55 Cluster: Aryldialkylphosphatase related protein;...    33   6.2  
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    33   8.2  

>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = -3

Query: 298 AGWWYLPARTHKRS 257
           A WWYLPARTHKRS
Sbjct: 569 AEWWYLPARTHKRS 582


>UniRef50_A3ZY55 Cluster: Aryldialkylphosphatase related protein;
           n=1; Blastopirellula marina DSM 3645|Rep:
           Aryldialkylphosphatase related protein - Blastopirellula
           marina DSM 3645
          Length = 434

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = +3

Query: 285 YHHPAYFGREAIMRFSLKGGAAVVTILSPQNLYLKVGGAFTS*IAMGS---INHW 440
           + HP YF  EA+    +K     VTIL+  N  L +   +T+  + GS   ++HW
Sbjct: 69  HFHPTYFNVEALEDLDIKFPVEYVTILATYNAKLALESGYTAARSGGSLFNVDHW 123


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -3

Query: 424 PIAIYDVNAPPTLRYKF 374
           P  +YDVNAPPT RYKF
Sbjct: 175 PRHLYDVNAPPTSRYKF 191


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,445,189
Number of Sequences: 1657284
Number of extensions: 13740159
Number of successful extensions: 25869
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25868
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)