Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0922
         (696 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7NM09 Cluster: Gll0960 protein; n=1; Gloeobacter viola...    34   2.9  
UniRef50_UPI00006CB3B9 Cluster: Acyltransferase family protein; ...    34   3.8  

>UniRef50_Q7NM09 Cluster: Gll0960 protein; n=1; Gloeobacter
           violaceus|Rep: Gll0960 protein - Gloeobacter violaceus
          Length = 238

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 18/63 (28%), Positives = 33/63 (52%)
 Frame = +3

Query: 279 SNFIVATTKNEKFSFQIFPNYSTSYQISVEENCTYHFTQRKFRKRSRDARTKMQIIYLCN 458
           SNFI A  K++     I PN +   +++VEE+    F +R     + D R +M ++ + +
Sbjct: 127 SNFINALAKHDLGKKDIMPNLNLFARVAVEEDGGLTFQERSKAGSTVDLRAEMNVLVVIS 186

Query: 459 SIP 467
           + P
Sbjct: 187 NTP 189


>UniRef50_UPI00006CB3B9 Cluster: Acyltransferase family protein;
           n=1; Tetrahymena thermophila SB210|Rep: Acyltransferase
           family protein - Tetrahymena thermophila SB210
          Length = 712

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
 Frame = -1

Query: 558 KRRNRTE---STLTQAKVRICQSQRKFFANSVTRVWNCIGRLFAFWYARLVNAF*TFFG* 388
           KRR  T    ST+++ +      QR+F A+ +   +N IG L   +  +  N     F  
Sbjct: 174 KRRPNTSLISSTVSECQQNSSSQQRQFIASQIISQFNFIGHLQKVFILKSNNEDLNIFNG 233

Query: 387 NGTYSFLQQIFGN 349
             T+SFLQ I G+
Sbjct: 234 IRTFSFLQVILGH 246


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,026,117
Number of Sequences: 1657284
Number of extensions: 10773870
Number of successful extensions: 23467
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23461
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)