Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0918
         (690 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B623D Cluster: PREDICTED: similar to ENSANGP000...    83   6e-15
UniRef50_UPI000051A543 Cluster: PREDICTED: similar to Rlc1 CG937...    82   1e-14
UniRef50_Q8T3V6 Cluster: AT29239p; n=6; Diptera|Rep: AT29239p - ...    68   2e-10
UniRef50_UPI0000D55FE3 Cluster: PREDICTED: similar to CG9378-PB,...    65   2e-09
UniRef50_A0ZHQ4 Cluster: Putative uncharacterized protein; n=1; ...    33   5.0  
UniRef50_Q18BJ7 Cluster: Putative uncharacterized protein; n=2; ...    33   8.7  

>UniRef50_UPI00015B623D Cluster: PREDICTED: similar to
           ENSANGP00000013554; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000013554 - Nasonia
           vitripennis
          Length = 271

 Score = 83.0 bits (196), Expect = 6e-15
 Identities = 40/87 (45%), Positives = 61/87 (70%)
 Frame = +3

Query: 6   RASEYDTPKFMNTRWVRPYLKHGFINSLAVKKFRRLYNEKIHSEVRKAHNRDFNHVQHLL 185
           R  ++  PK +NT+W + +L  G+    AV+KF++LY EK+ +E R+A NR+ N V  LL
Sbjct: 175 RLKQHLIPKHLNTKWKQRHL-FGY-GGHAVRKFQKLYREKLWNEKRRAQNREKNAVISLL 232

Query: 186 KRFPNLDMDTLKAEYPNVDIEKAKEQR 266
           K+FPN+D+DTLK +YP+VD++K    R
Sbjct: 233 KKFPNVDIDTLKEKYPSVDMDKIFRSR 259


>UniRef50_UPI000051A543 Cluster: PREDICTED: similar to Rlc1
           CG9378-PB, isoform B isoform 1; n=1; Apis mellifera|Rep:
           PREDICTED: similar to Rlc1 CG9378-PB, isoform B isoform
           1 - Apis mellifera
          Length = 268

 Score = 82.2 bits (194), Expect = 1e-14
 Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
 Frame = +3

Query: 6   RASEYDTPKFMNTRWVRPYLKHGF-INSLAVKKFRRLYNEKIHSEVRKAHNRDFNHVQHL 182
           R  +Y  PK+MN+ W   + KH F     AV+KF RLY EK+ +E RK  NR  N V  L
Sbjct: 175 RLRQYSIPKYMNSAW---HKKHQFGYGGYAVRKFLRLYREKLWNEKRKLRNRQNNQVATL 231

Query: 183 LKRFPNLDMDTLKAEYPNVDIEKAKEQRNQE 275
           ++ FPNLDM+ +K +YP  +IEK K  R  +
Sbjct: 232 IRIFPNLDMEAVKEQYPLANIEKIKRTRKSD 262


>UniRef50_Q8T3V6 Cluster: AT29239p; n=6; Diptera|Rep: AT29239p -
           Drosophila melanogaster (Fruit fly)
          Length = 271

 Score = 68.1 bits (159), Expect = 2e-10
 Identities = 31/86 (36%), Positives = 53/86 (61%)
 Frame = +3

Query: 6   RASEYDTPKFMNTRWVRPYLKHGFINSLAVKKFRRLYNEKIHSEVRKAHNRDFNHVQHLL 185
           +A E+  P FMN +W++     G+    AV +F   Y EK+++  RKA NR  N V  +L
Sbjct: 175 KACEHALPPFMNLKWIKSR-NIGY-GGRAVNRFLLKYREKLYNAKRKAKNRSRNEVMMIL 232

Query: 186 KRFPNLDMDTLKAEYPNVDIEKAKEQ 263
           +R PN D+D L+ ++P+V+++K + +
Sbjct: 233 RRNPNFDLDVLRRQFPDVNVDKLRNE 258


>UniRef50_UPI0000D55FE3 Cluster: PREDICTED: similar to CG9378-PB,
           isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG9378-PB, isoform B - Tribolium castaneum
          Length = 249

 Score = 64.9 bits (151), Expect = 2e-09
 Identities = 28/51 (54%), Positives = 36/51 (70%)
 Frame = +3

Query: 114 YNEKIHSEVRKAHNRDFNHVQHLLKRFPNLDMDTLKAEYPNVDIEKAKEQR 266
           Y EK++   ++   R+FNHV  LL RFPN+DM  LK +YP+VDIEKAK  R
Sbjct: 190 YREKLYLTKKRKQRRNFNHVIGLLNRFPNMDMQALKEQYPDVDIEKAKASR 240


>UniRef50_A0ZHQ4 Cluster: Putative uncharacterized protein; n=1;
           Nodularia spumigena CCY 9414|Rep: Putative
           uncharacterized protein - Nodularia spumigena CCY 9414
          Length = 1285

 Score = 33.5 bits (73), Expect = 5.0
 Identities = 24/77 (31%), Positives = 39/77 (50%)
 Frame = +3

Query: 6   RASEYDTPKFMNTRWVRPYLKHGFINSLAVKKFRRLYNEKIHSEVRKAHNRDFNHVQHLL 185
           +A ++D P+     W++  LKH  I   A        N+KI  E R    +++   + LL
Sbjct: 376 QAEKFDKPRDRALEWLQDLLKHHLIQIGA--------NDKI--EFRHQLIQEYYTAECLL 425

Query: 186 KRFPNLDMDTLKAEYPN 236
           K+ PNL+ + L+ EY N
Sbjct: 426 KQLPNLNDNCLQREYLN 442


>UniRef50_Q18BJ7 Cluster: Putative uncharacterized protein; n=2;
           Clostridium difficile|Rep: Putative uncharacterized
           protein - Clostridium difficile (strain 630)
          Length = 593

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = -2

Query: 551 LYIP*MDESESQLYTALERI-EL--EHMAVLPGEIGRMANTYLYNYIYNMPCLPLRSVSK 381
           L+I  MD +E   +   E + E+  E   +L  ++G+      YNY+Y MP + +    +
Sbjct: 56  LFIKFMDTTEDIFFILEEELLEVMNEEYELLKLKMGQKNRNISYNYVYIMPYVEVEETYE 115

Query: 380 IY*F*NNQIINK 345
              F NN II+K
Sbjct: 116 FEEFVNNNIIDK 127


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,889,111
Number of Sequences: 1657284
Number of extensions: 11352774
Number of successful extensions: 27246
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27234
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)