Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0918
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    24   1.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.4  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   3.1  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 60  YLKHGFINSLAVKKFRRLYNEKI 128
           YL HGF  +     +R +YN KI
Sbjct: 488 YLDHGFWGTTEYHNWRVVYNNKI 510


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 99  KFRRLYNEKIHSEVRKAHNRDFNHVQHLLKRFPNLDM 209
           KF    +  I++ + +    DF+ + HLL    NLD+
Sbjct: 177 KFMIFTSTCIYTNLLRIIEADFSKLNHLLSGTENLDL 213


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -3

Query: 151 CAFLTSLWIFSLYNLLNFFTAKLLMKPCFRY 59
           CAF+           L++FT  LL  PC  Y
Sbjct: 184 CAFIFFNMHLLFLLCLDYFTLHLLFLPCIYY 214


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
 Frame = -3

Query: 256 LAFSISTFGYSAFKVSISRLGKRLSKCWTWLKSLL---CAFLTSLWIFSLYNLLNFFTAK 86
           +A  I+    ++F + + +L + L +       +      F+T  ++  +   LNFFT+ 
Sbjct: 202 MAVRINPKNCASFVIEVRKLSRLLGEMVGLFNDIFGWPLVFITGRFVIKILVALNFFTST 261

Query: 85  L 83
           L
Sbjct: 262 L 262


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,827
Number of Sequences: 336
Number of extensions: 3459
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)