Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0918
         (690 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC112275-1|AAI12276.1| 1011|Homo sapiens hypothetical protein LO...    31   5.1  
BC101628-1|AAI01629.1| 1011|Homo sapiens family with sequence si...    31   5.1  
AL512363-1|CAI15113.1| 1011|Homo sapiens el gene, the 5' end of ...    31   5.1  
AL049555-1|CAI21667.1| 1011|Homo sapiens protein ( Human DNA seq...    31   5.1  
AK055204-1|BAB70873.1|  811|Homo sapiens protein ( Homo sapiens ...    31   5.1  

>BC112275-1|AAI12276.1| 1011|Homo sapiens hypothetical protein
           LOC222584 protein.
          Length = 1011

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +3

Query: 75  FINSLAVKKFRRLYNEKIHSEVRKAHNRDFNHVQHLLKRFPNLDMDT 215
           F N LA +K   L +   +S VR++ N   NH++ L +R P L+  T
Sbjct: 444 FANRLAQRKTTNLADR--NSNVRRSFNGTDNHIRFLQQRMPTLEHTT 488


>BC101628-1|AAI01629.1| 1011|Homo sapiens family with sequence
           similarity 83, member B protein.
          Length = 1011

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +3

Query: 75  FINSLAVKKFRRLYNEKIHSEVRKAHNRDFNHVQHLLKRFPNLDMDT 215
           F N LA +K   L +   +S VR++ N   NH++ L +R P L+  T
Sbjct: 444 FANRLAQRKTTNLADR--NSNVRRSFNGTDNHIRFLQQRMPTLEHTT 488


>AL512363-1|CAI15113.1| 1011|Homo sapiens el gene, the 5' end of the
           gene for a novel proteinA, member 8) protein.
          Length = 1011

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +3

Query: 75  FINSLAVKKFRRLYNEKIHSEVRKAHNRDFNHVQHLLKRFPNLDMDT 215
           F N LA +K   L +   +S VR++ N   NH++ L +R P L+  T
Sbjct: 444 FANRLAQRKTTNLADR--NSNVRRSFNGTDNHIRFLQQRMPTLEHTT 488


>AL049555-1|CAI21667.1| 1011|Homo sapiens protein ( Human DNA
           sequence from clone RP3-523K23 on chromosome 6p12.1-12.3
            Contains the 3' end of the gene for a novel protein.
           ).
          Length = 1011

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +3

Query: 75  FINSLAVKKFRRLYNEKIHSEVRKAHNRDFNHVQHLLKRFPNLDMDT 215
           F N LA +K   L +   +S VR++ N   NH++ L +R P L+  T
Sbjct: 444 FANRLAQRKTTNLADR--NSNVRRSFNGTDNHIRFLQQRMPTLEHTT 488


>AK055204-1|BAB70873.1|  811|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30642 fis, clone CTONG2002965. ).
          Length = 811

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +3

Query: 75  FINSLAVKKFRRLYNEKIHSEVRKAHNRDFNHVQHLLKRFPNLDMDT 215
           F N LA +K   L +   +S VR++ N   NH++ L +R P L+  T
Sbjct: 444 FANRLAQRKTTNLADR--NSNVRRSFNGTDNHIRFLQQRMPTLEHTT 488


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,396,550
Number of Sequences: 237096
Number of extensions: 1652279
Number of successful extensions: 2508
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2508
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)