Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0916
(660 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria gla... 44 0.002
UniRef50_UPI00015B43EC Cluster: PREDICTED: similar to pol-like p... 39 0.093
UniRef50_UPI00015B47A9 Cluster: PREDICTED: similar to pol-like p... 39 0.12
UniRef50_Q24363 Cluster: Putative ORF2; n=2; melanogaster subgro... 38 0.21
UniRef50_A7QDJ7 Cluster: Chromosome chr10 scaffold_81, whole gen... 37 0.49
UniRef50_UPI00015B5A7A Cluster: PREDICTED: similar to pol-like p... 36 1.1
UniRef50_UPI00015B4F8A Cluster: PREDICTED: similar to lachesin, ... 35 1.5
UniRef50_UPI0000D573B2 Cluster: PREDICTED: similar to tumor supp... 35 1.5
UniRef50_UPI00015B4772 Cluster: PREDICTED: similar to pol-like p... 35 2.0
UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila melanogast... 34 3.5
UniRef50_UPI00015B4909 Cluster: PREDICTED: similar to GA16357-PA... 33 6.1
UniRef50_UPI00015B542A Cluster: PREDICTED: similar to myosin-rho... 33 8.0
UniRef50_A5FFG3 Cluster: Peptidase S9, prolyl oligopeptidase act... 33 8.0
>UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria
glabrata|Rep: Pol-like protein - Biomphalaria glabrata
(Bloodfluke planorb)
Length = 1222
Score = 44.4 bits (100), Expect = 0.002
Identities = 23/59 (38%), Positives = 34/59 (57%)
Frame = -2
Query: 431 NDNMEFLIISDSKSVLMALDKCHIHYRNNYLLYKIREALTSLDTPVTFKWVPSHRGIKG 255
++ +F+I SDSKS L AL + + K+ + +T+ VTF WVPSH GI+G
Sbjct: 1009 SERSKFIICSDSKSALQALGRMKTDIPLVHKSLKLLDLITADRRDVTFIWVPSHVGIEG 1067
>UniRef50_UPI00015B43EC Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to pol-like protein - Nasonia vitripennis
Length = 1119
Score = 39.1 bits (87), Expect = 0.093
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = -2
Query: 419 EFLIISDSKSVLMALDKCHIHYRNNYLLYKIREALTSL---DTPVTFKWVPSHRGIKG 255
EFL+ SDS+S L+AL + R + L+ ++R+ L S + + W+P+H GIKG
Sbjct: 891 EFLVFSDSQSALLAL--ANNKNRCSPLIAELRQKLASRAEENVKIKLVWIPAHAGIKG 946
>UniRef50_UPI00015B47A9 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 819
Score = 38.7 bits (86), Expect = 0.12
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Frame = -2
Query: 431 NDNMEFLIISDSKSVLMALDKCHIHYRNNYLLYKIREALTSL---DTPVTFKWVPSHRGI 261
+ N E++I SDSKS L AL+ + +++ L+ IR+ L+ L + V W+P+H G+
Sbjct: 613 HQNNEYIIFSDSKSALSALNNFNSR-KSSPLIADIRQKLSYLADQNIKVKLVWIPAHIGL 671
Query: 260 KG 255
G
Sbjct: 672 TG 673
>UniRef50_Q24363 Cluster: Putative ORF2; n=2; melanogaster
subgroup|Rep: Putative ORF2 - Drosophila melanogaster
(Fruit fly)
Length = 1219
Score = 37.9 bits (84), Expect = 0.21
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = -2
Query: 446 LQSLQNDNMEFLIISDSKSVLMALDKCHIHYRNNYLLYKIREALTSLDTPVTFKWVPSHR 267
++ +N +F+I SDS L A+D N++ +IR +T + W+P H
Sbjct: 996 IELTKNRRGKFIICSDS---LSAVDSIQNTNNNSFYPSRIRSLITQHAPKIKIMWIPGHS 1052
Query: 266 GIKG 255
GIKG
Sbjct: 1053 GIKG 1056
>UniRef50_A7QDJ7 Cluster: Chromosome chr10 scaffold_81, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr10 scaffold_81, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 233
Score = 36.7 bits (81), Expect = 0.49
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -1
Query: 192 VPFTDFLFDCGGNEADLSHLFLSC 121
+P TD CGG+E DL H+FLSC
Sbjct: 34 MPVTDMCILCGGHEEDLMHIFLSC 57
>UniRef50_UPI00015B5A7A Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 727
Score = 35.5 bits (78), Expect = 1.1
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Frame = -2
Query: 485 TTMYSAIINC*KILQSLQNDNMEFLIISDSKSVLMALDKCHIHYRNNYLLYKIREALTSL 306
T SAI N I +LQN FLI SDS S L +L+ R N + +I++
Sbjct: 410 TAECSAISNALDI--ALQNPGHFFLIFSDSLSALSSLNSTKFTARINPHVLEIKKKHNEF 467
Query: 305 -----DTPVTFKWVPSHRGIKG 255
+ + + W+P+H GI G
Sbjct: 468 ISKNPENDIKYYWIPAHVGILG 489
>UniRef50_UPI00015B4F8A Cluster: PREDICTED: similar to lachesin,
putative; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to lachesin, putative - Nasonia vitripennis
Length = 742
Score = 35.1 bits (77), Expect = 1.5
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -2
Query: 404 SDSKSVLMALDKCHIHYRNNYLLYKIREALTSL--DTPVTFKWVPSHRGIKG 255
SDS++ LMALD +I + + + R+AL SL V WVP H G+ G
Sbjct: 144 SDSRAALMALDIINISSKE---VLRFRQALESLAEHNAVRLVWVPGHSGVVG 192
>UniRef50_UPI0000D573B2 Cluster: PREDICTED: similar to tumor
suppressing subtransferable candidate 5; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to tumor suppressing
subtransferable candidate 5 - Tribolium castaneum
Length = 420
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +2
Query: 344 NYFYSEYDICLKPLTHFLNLILLRTPCYHFVNFAEFF 454
NYFY CLK LTHF L+ L C +F E F
Sbjct: 291 NYFYKGDVSCLKRLTHFFLLMTLSLVCLYFAPNIELF 327
>UniRef50_UPI00015B4772 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 751
Score = 34.7 bits (76), Expect = 2.0
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = -1
Query: 168 DCGGNEADLSHLFLSCPTFKFQRLILVTDIMK 73
+CG + DL+H+ +CP F+ QR +L++ + K
Sbjct: 685 ECGYDSEDLNHILWNCPIFEAQRTVLLSRLKK 716
>UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila
melanogaster|Rep: Pol protein - Drosophila melanogaster
(Fruit fly)
Length = 1227
Score = 33.9 bits (74), Expect = 3.5
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = -2
Query: 413 LIISDSKSVLMALDKCHIHYRNNYLLYKIREALTSLDTPVTFKWVPSHRGIKG 255
+I +DS S L A+ + N+ ++R L+S +T WVPSH+GI G
Sbjct: 1022 VICTDSLSSLSAIRNWN---HNDPTTQEVRHILSSHPKKITLLWVPSHQGIHG 1071
>UniRef50_UPI00015B4909 Cluster: PREDICTED: similar to GA16357-PA,
partial; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to GA16357-PA, partial - Nasonia vitripennis
Length = 826
Score = 33.1 bits (72), Expect = 6.1
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = -2
Query: 485 TTMYSAIINC*KILQSLQNDNMEFLIISDSKSVLMALDKCHIHYRNNYLLYKIREALTSL 306
T SAI N I +LQN FLI S+S S L +L+ R N + +I++
Sbjct: 547 TAECSAISNALDI--ALQNPGHSFLIFSNSLSALSSLNSTKFTARINPHVLEIKKKHNEF 604
Query: 305 -----DTPVTFKWVPSHRGI 261
+ + + W+P+H GI
Sbjct: 605 ISKNPENDIKYYWIPAHVGI 624
>UniRef50_UPI00015B542A Cluster: PREDICTED: similar to myosin-rhogap
protein, myr; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to myosin-rhogap protein, myr - Nasonia
vitripennis
Length = 2292
Score = 32.7 bits (71), Expect = 8.0
Identities = 24/78 (30%), Positives = 39/78 (50%)
Frame = -2
Query: 488 RTTMYSAIINC*KILQSLQNDNMEFLIISDSKSVLMALDKCHIHYRNNYLLYKIREALTS 309
+T +Y AI+ C + L + I SDS++ L AL H + L+++ +E + +
Sbjct: 2057 QTEIY-AILTCAQRNIELGARDRIITICSDSQAALRAL---RAHRTTSRLVWEYKEVVNN 2112
Query: 308 LDTPVTFKWVPSHRGIKG 255
V WVP H GI+G
Sbjct: 2113 --NKVRLLWVPGHTGIRG 2128
>UniRef50_A5FFG3 Cluster: Peptidase S9, prolyl oligopeptidase active
site domain protein; n=1; Flavobacterium johnsoniae
UW101|Rep: Peptidase S9, prolyl oligopeptidase active
site domain protein - Flavobacterium johnsoniae UW101
Length = 847
Score = 32.7 bits (71), Expect = 8.0
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -2
Query: 416 FLIISDSKSVLMALD-KCHIHYRNNYLLYKIREALTSLDTPVTFKWVPSHRGIK 258
F I+ KS L A D + Y N Y +Y E ++S +W+P H K
Sbjct: 252 FFIVQKKKSKLNANDISPQVWYGNTYNIYPQEEKVSSFKDTYLAQWLPEHENFK 305
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,330,891
Number of Sequences: 1657284
Number of extensions: 12258012
Number of successful extensions: 25107
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 24303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25099
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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