Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0916
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.9  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   3.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.9  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    22   5.1  

>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -1

Query: 162 GGNEADLSHLFLSCPTFKFQRLILVTDIMKLMDFDENNQTKHGNSLAN 19
           GG+EA    L  + P  ++ RL    D   ++  D+N+       LA+
Sbjct: 24  GGDEATADELCENRPADEYFRLTTEGDCRDVVRCDKNSDNNGATRLAS 71


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 436 KLCRIFQQLIIAEYIVVL 489
           K CRI +  IIA Y++ +
Sbjct: 36  KFCRILKYFIIAIYVLTI 53


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 367 VIFTIEIIIYCI 332
           +IFTI ++ YC+
Sbjct: 220 IIFTIHLLFYCV 231


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 478 CIRRLLIAEKFCKVYKMITWSS 413
           C+  LL++E+  K  KMI + S
Sbjct: 98  CVESLLLSEEMPKFRKMIEYLS 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,328
Number of Sequences: 336
Number of extensions: 3324
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)