Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0916
         (660 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical p...    29   2.9  
AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical ...    29   2.9  
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote...    29   3.9  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    29   3.9  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    29   3.9  
Z82071-2|CAB04918.2|  362|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical
           protein M01G12.12 protein.
          Length = 1579

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -1

Query: 126 SCPTFKFQRLILVTDIMKLMDFDENNQTKHGNSLANN 16
           SC  F+++ +  V  I  L+D + N Q KHG SL+ N
Sbjct: 653 SCFQFRYRGMKGVLAIDPLLDKERNWQEKHGISLSKN 689


>AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical
           protein M01G12.12 protein.
          Length = 1579

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -1

Query: 126 SCPTFKFQRLILVTDIMKLMDFDENNQTKHGNSLANN 16
           SC  F+++ +  V  I  L+D + N Q KHG SL+ N
Sbjct: 653 SCFQFRYRGMKGVLAIDPLLDKERNWQEKHGISLSKN 689


>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
            protein.
          Length = 10578

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = -2

Query: 434  QNDNMEFLIISDSKSVLMALDKCHIHYRNNYLLYKIREALTSLDTPVTFKWVPSHRG 264
            + D  E+ ++ ++K      D  HI   +  L  +  + +   DT  TFKW+P H G
Sbjct: 8899 KRDGGEYTVVLENKYGKDESD-LHITMVDTPLKPRKAQLVALTDTSATFKWLPPHTG 8954


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
            protein.
          Length = 18519

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = -2

Query: 434  QNDNMEFLIISDSKSVLMALDKCHIHYRNNYLLYKIREALTSLDTPVTFKWVPSHRG 264
            + D  E+ ++ ++K      D  HI   +  L  +  + +   DT  TFKW+P H G
Sbjct: 8919 KRDGGEYTVVLENKYGKDESD-LHITMVDTPLKPRKAQLVALTDTSATFKWLPPHTG 8974


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
            protein.
          Length = 18534

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = -2

Query: 434  QNDNMEFLIISDSKSVLMALDKCHIHYRNNYLLYKIREALTSLDTPVTFKWVPSHRG 264
            + D  E+ ++ ++K      D  HI   +  L  +  + +   DT  TFKW+P H G
Sbjct: 8919 KRDGGEYTVVLENKYGKDESD-LHITMVDTPLKPRKAQLVALTDTSATFKWLPPHTG 8974


>Z82071-2|CAB04918.2|  362|Caenorhabditis elegans Hypothetical
           protein W05B5.2 protein.
          Length = 362

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -3

Query: 616 LMPRVFFISNPCITFILHKYIDT*LNRCNAY 524
           L+PRVF  S+ C+  IL+ ++      C+ Y
Sbjct: 304 LLPRVFSYSSSCLNPILYSFLSGRFEFCSIY 334


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,722,021
Number of Sequences: 27780
Number of extensions: 304061
Number of successful extensions: 604
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)