Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0915
(693 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces p... 70 3e-13
SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|... 45 9e-06
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 38 0.001
SPAC25H1.09 |mde5|meu30, SPAC4A8.01|alpha-amylase homolog Mde5|S... 38 0.001
SPCC11E10.09c ||SPCC188.01c|alpha-amylase homolog |Schizosacchar... 38 0.001
SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyc... 36 0.006
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 32 0.090
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 32 0.090
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 32 0.090
SPCC63.02c |aah3||alpha-amylase homolog Aah3|Schizosaccharomyces... 30 0.36
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 30 0.36
SPAC12B10.13 |||CTLH domain|Schizosaccharomyces pombe|chr 1|||Ma... 27 3.4
SPCC16A11.03c |||DUF2009 protein|Schizosaccharomyces pombe|chr 3... 26 4.5
SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa... 26 4.5
>SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 579
Score = 70.1 bits (164), Expect = 3e-13
Identities = 35/83 (42%), Positives = 54/83 (65%)
Frame = +3
Query: 258 YEVFPASFKDSNNDGTGDFKGLITKLDYIQNLGVAAIRLNYIFQADHYPEDYNNVTSMLD 437
Y+++PASFKDSN DG GD +G+I+K+DY++ L V +I L I+ + Y +V+
Sbjct: 20 YQIYPASFKDSNGDGFGDLEGIISKVDYLKALNVESIWLCPIYPSPLKDMGY-DVSDYKQ 78
Query: 438 IDRSLGVLKDLQDLIFNIHKRNM 506
ID G L+DL L+ +H+R+M
Sbjct: 79 IDSRYGTLEDLDRLMKALHERDM 101
>SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 491
Score = 45.2 bits (102), Expect = 9e-06
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Frame = +3
Query: 306 GDFKGLITKLDYIQNLGVAAIRLNYIFQ----ADHYPEDYNN--VTSMLDIDRSLGVLKD 467
G ++G+I KLDYIQ+LG A+ ++ I + Y E Y+ + ++ G +D
Sbjct: 56 GTWRGIIQKLDYIQSLGCTAVWISPIVKNIEGVTGYGEAYHGYWAEDLTQLNPHFGTKQD 115
Query: 468 LQDLIFNIHKRNM 506
L +L+ +HKRNM
Sbjct: 116 LTELVDQLHKRNM 128
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 37.9 bits (84), Expect = 0.001
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Frame = +3
Query: 276 SFKDSNNDGTGDFKGLITKLDYIQNLGVAAIRLNYIFQ--ADHYPED---YNNV--TSML 434
SF DS+ G G + G+ +KLDYIQ +G AI ++ + + Y D Y+ T
Sbjct: 52 SFDDSSYCG-GTWSGIRSKLDYIQGMGFNAIWISPVEKNLEGSYGSDGEAYHGYWNTDFT 110
Query: 435 DIDRSLGVLKDLQDLIFNIHKRNM 506
++ G DL DLI ++H R+M
Sbjct: 111 QLNEHFGSEDDLIDLITDMHNRDM 134
>SPAC25H1.09 |mde5|meu30, SPAC4A8.01|alpha-amylase homolog
Mde5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 37.9 bits (84), Expect = 0.001
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +3
Query: 306 GDFKGLITKLDYIQNLGVAAIRLNYIFQ----ADHYPEDYNNV--TSMLDIDRSLGVLKD 467
G+++G+I KLDYIQ +G AI ++ I + Y E Y+ + ++ G +D
Sbjct: 62 GNWRGIIDKLDYIQGMGFTAIWISPIIKNIEGRTKYGEAYHGYWPQDLYTLNPHFGTEQD 121
Query: 468 LQDLIFNIHKRNM 506
L DL +H R M
Sbjct: 122 LIDLADALHDRGM 134
>SPCC11E10.09c ||SPCC188.01c|alpha-amylase homolog
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 478
Score = 37.9 bits (84), Expect = 0.001
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Frame = +3
Query: 306 GDFKGLITKLDYIQNLGVAAIRLNYIFQADHYPED----YNN--VTSMLDIDRSLGVLKD 467
G +KG+ LDYI++LG AI ++ I + D Y+ M ++ + G +D
Sbjct: 51 GTWKGITRNLDYIKSLGCTAIWISPIVKNISETTDCGQAYHGYWAQDMTQLNENFGTEED 110
Query: 468 LQDLIFNIHKRNM 506
L++L+ IH++NM
Sbjct: 111 LKELVNAIHEKNM 123
>SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 35.9 bits (79), Expect = 0.006
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Frame = +3
Query: 306 GDFKGLITKLDYIQNLGVAAIRLNYIFQ----ADHYPEDYNN--VTSMLDIDRSLGVLKD 467
G + G+ LDYIQ +G AI ++ IF+ D Y+ T++ +++ G ++
Sbjct: 66 GTWNGIRNHLDYIQGMGFDAIWISPIFENVEGNDIDGSSYHGYWTTNLYELNHHFGTKEE 125
Query: 468 LQDLIFNIHKRNM 506
+LI +HKR++
Sbjct: 126 FMELIQELHKRDI 138
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 31.9 bits (69), Expect = 0.090
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 258 YEVFPASFKDSNNDGTGDFKGLITKLDYIQNLGVAAIRL-NYIFQADHYPEDYNNVTSML 434
Y+++ F++ GD G+ LDY+Q +GV A+ F + D +
Sbjct: 91 YDIYETEFRNG-----GDIIGVRQSLDYLQGMGVKAVYFAGTPFVNMPWGADQYSPLDFT 145
Query: 435 DIDRSLGVLKDLQDLIFNIHKRNM 506
+D LG + D + I +H + M
Sbjct: 146 LLDPHLGTINDWRGTIEEMHSKGM 169
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 31.9 bits (69), Expect = 0.090
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Frame = +3
Query: 258 YEVFPASFKDSNNDGTGDFKGLITKLDYIQNLGVAAIR------LNYIFQADHY-PEDYN 416
Y+++ F++ GD GL LDY++ +G+ I LN + AD Y P DY
Sbjct: 90 YDIYETGFRNG-----GDIIGLKDSLDYLEIMGIKVIYIAGTPFLNQPWGADQYSPLDYT 144
Query: 417 NVTSMLDIDRSLGVLKDLQDLIFNIHKRNMSSYLI 521
+D G + +D I IH+R YL+
Sbjct: 145 ------ILDHHSGTIAQWRDTIEEIHRRGF--YLV 171
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 31.9 bits (69), Expect = 0.090
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Frame = +3
Query: 258 YEVFPASFKDSNNDGTGDFKGLITKLDYIQNLGVAAIRL------NYIFQADHY-PEDYN 416
Y++ SF++ GD GL LDY++ LG I + N + AD Y P DY
Sbjct: 95 YDISEVSFRNG-----GDIVGLELSLDYLEGLGTQGIYIAGTPFVNMPWGADQYSPLDYT 149
Query: 417 NVTSMLDIDRSLGVLKDLQDLIFNIHKRNMSSYLI 521
+D LG + + I +H+R M YL+
Sbjct: 150 ------ILDHHLGTIDQWRSTITAMHERGM--YLV 176
>SPCC63.02c |aah3||alpha-amylase homolog Aah3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 564
Score = 29.9 bits (64), Expect = 0.36
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 285 DSNNDGTGDFKGLITKLDYIQNLGVAAIRLNYI 383
D+N G +KG+ KLDYI+++G AI ++ I
Sbjct: 54 DANQYCGGTWKGIENKLDYIEDMGFNAIWISPI 86
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 29.9 bits (64), Expect = 0.36
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 345 QNLGVAAIRLNYIFQADHYPEDYNNVTSMLDIDRSLGVLKDLQDLIFNIHKRNMSS 512
+ + VAA I Q H P+ ++ T+ + I LG L+ IF +HK N ++
Sbjct: 92 ETVDVAACTARGI-QVSHVPKAVDDATADVGIFLMLGALRGFNQGIFELHKNNWNA 146
>SPAC12B10.13 |||CTLH domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 677 LNKNPINSLVLETNEL*QQLLDPNS*LQYYLL 582
+ INS + + NEL ++LD NS L + LL
Sbjct: 81 IKSGSINSAICKLNELEPEILDTNSELLFELL 112
>SPCC16A11.03c |||DUF2009 protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 466
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 19 SKNGDLIIGQAEDVKLNGNLKINNRKL-PSFVNWNWVVIRKILLWV 153
+KNG L IG KLN + K + S V W+ ++ + LLW+
Sbjct: 251 TKNGSLKIGYMTGAKLNHDHKTQFFYVDQSLVFWSCMMDQMFLLWL 296
>SPAC823.15 |ppa1||minor serine/threonine protein phosphatase
Ppa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 306 GDFKGLITKLDYIQNLGVAAIRLNYIFQADHYPEDYNNVTSM 431
GD G L + N+G + NY+F D+ Y++V ++
Sbjct: 56 GDIHGQFHDLMELFNIGGPSPDTNYLFMGDYVDRGYHSVETV 97
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,859,501
Number of Sequences: 5004
Number of extensions: 59265
Number of successful extensions: 157
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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