Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0915
         (693 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical pr...    57   1e-08
Z93375-4|CAB07562.2|  647|Caenorhabditis elegans Hypothetical pr...    52   5e-07
AL117204-39|CAB55145.4|  422|Caenorhabditis elegans Hypothetical...    29   2.4  
U49829-5|AAK68351.1|  564|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z79755-9|CAC42297.1|  143|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical
           protein F26D10.9a protein.
          Length = 613

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
 Frame = +3

Query: 231 PTMVSRKGFYEVFPASFKDSNNDGTGDFKGLITKLDYIQNLGVAAIRLNYIFQ--ADHYP 404
           P     K  Y++  A+F DS+NDG GDF G+  K+D+++ +GV  +    + +   D Y 
Sbjct: 96  PDWWQTKVSYQLLTATFYDSDNDGVGDFAGISQKIDFLRKIGVTTVYPTPVIKIHKDEYF 155

Query: 405 EDYNNVTSMLDIDRSLGVLKDLQDLIFNIHKRNMSSYLI 521
             Y +V     +D   G  +  ++LI  +H R M  YL+
Sbjct: 156 NSY-DVVDHNSVDERFGTEEQFKELIDTVHNRAM--YLV 191


>Z93375-4|CAB07562.2|  647|Caenorhabditis elegans Hypothetical
           protein C38C6.2 protein.
          Length = 647

 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 28/84 (33%), Positives = 46/84 (54%)
 Frame = +3

Query: 258 YEVFPASFKDSNNDGTGDFKGLITKLDYIQNLGVAAIRLNYIFQADHYPEDYNNVTSMLD 437
           Y V+  SF+DS+ DG GD  GLI +LD ++  GV  +  +    +D   ++   V S   
Sbjct: 140 YHVWVPSFQDSDGDGVGDVDGLINRLDQLRKSGVQTVWPSPFLISD---DEKTAVRSFSQ 196

Query: 438 IDRSLGVLKDLQDLIFNIHKRNMS 509
           +D  +GV +   +LI  IH++ M+
Sbjct: 197 MDPKIGVNQKADELINKIHEKEMN 220


>AL117204-39|CAB55145.4|  422|Caenorhabditis elegans Hypothetical
           protein Y116A8C.9 protein.
          Length = 422

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +1

Query: 94  KLPSFVNWNWVVIRKILLWVVLSGLIACLAAIIGMIITI 210
           KL   V+W W V+  I LWVVLS  +A +  +  +++++
Sbjct: 169 KLDKQVDWTWAVV-FIPLWVVLS--LAAVGVLYALVLSV 204


>U49829-5|AAK68351.1|  564|Caenorhabditis elegans Hypothetical
           protein F27D9.7 protein.
          Length = 564

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -2

Query: 428 RSYIIVIFRIMISLKY--IIKSNSSNT*ILYIIKFSY 324
           RSYII++F I ISL    I    +  T IL+IIK SY
Sbjct: 229 RSYIIILFAISISLFICTIYCCPNEPTEILFIIKASY 265


>Z79755-9|CAC42297.1|  143|Caenorhabditis elegans Hypothetical
           protein F43G9.13 protein.
          Length = 143

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +1

Query: 106 FVNWNWVVIRKILLWVVLSGLIACLAAIIGMIITI---PKECNIDLPW 240
           ++N  W +   I LW+ LS ++  L A I  + T+   P  C I +P+
Sbjct: 38  YMNDWWEITLSIFLWMSLSFMVISLGATILSLFTLRKHPYVCFIPIPF 85


>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
            T01D3.7 protein.
          Length = 2882

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +3

Query: 270  PASFKDSNNDGTGDFKGLITKLDYIQNLGVAAIRLNYIFQADH-YPEDYNNVTSMLDIDR 446
            P    +S N   G    ++  LD +Q + ++++ + ++ Q    +PE+  ++     +DR
Sbjct: 1785 PFGIINSINTDFGKVLPVLNALD-VQTIRISSVFIEFVDQIQKIFPEEIMSLLDKDAVDR 1843

Query: 447  SLGVLKDLQD 476
             LG + D  D
Sbjct: 1844 FLGAIADQSD 1853


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,273,092
Number of Sequences: 27780
Number of extensions: 313848
Number of successful extensions: 785
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)