Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0913
(693 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6IE02 Cluster: Mod(Mdg4)-heS00531; n=1; Bombyx mori|Re... 130 4e-29
UniRef50_Q14QL4 Cluster: Hypothetical cation-transporting p-type... 37 0.41
UniRef50_UPI0000DBFFDF Cluster: UPI0000DBFFDF related cluster; n... 36 0.71
UniRef50_Q0B234 Cluster: YadA C-terminal domain protein; n=2; Bu... 35 2.2
UniRef50_A6C9B8 Cluster: Cytochrome d ubiquinol oxidase, subunit... 35 2.2
UniRef50_A6VL95 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0
UniRef50_A0PSS0 Cluster: PPE family protein; n=1; Mycobacterium ... 33 5.0
UniRef50_UPI0000E80594 Cluster: PREDICTED: hypothetical protein;... 33 6.6
UniRef50_UPI0000F1D84E Cluster: PREDICTED: similar to Secretory ... 33 8.8
UniRef50_A6G372 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
UniRef50_Q7R6G5 Cluster: GLP_170_208281_203902; n=1; Giardia lam... 33 8.8
UniRef50_A7EQG9 Cluster: Predicted protein; n=1; Sclerotinia scl... 33 8.8
UniRef50_Q92797 Cluster: Symplekin; n=89; Eukaryota|Rep: Symplek... 33 8.8
>UniRef50_Q6IE02 Cluster: Mod(Mdg4)-heS00531; n=1; Bombyx mori|Rep:
Mod(Mdg4)-heS00531 - Bombyx mori (Silk moth)
Length = 344
Score = 130 bits (313), Expect = 4e-29
Identities = 66/92 (71%), Positives = 67/92 (72%)
Frame = +1
Query: 7 EPTSRPGPRSSQQRQSVMTKLETDLDSKPSSTPVAVKRXXXXXXXXXXXXXXXXXXAKRK 186
+PTSRPGPRSSQQRQSVMTKLETDLDSKPSSTPVAVKR AKRK
Sbjct: 130 KPTSRPGPRSSQQRQSVMTKLETDLDSKPSSTPVAVKRPNRPSIASNNSSSSQSGPAKRK 189
Query: 187 CVDPLEAGPSGSAKDEFVTIPDEMRTMLSLPK 282
CVDPLEAGPSGSAKDEFVTIPDE PK
Sbjct: 190 CVDPLEAGPSGSAKDEFVTIPDEDENNAVAPK 221
Score = 126 bits (303), Expect = 7e-28
Identities = 70/117 (59%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Frame = +3
Query: 255 DENNAVAPKMEPEFVNESMWXXXXXXXXXXXXXYGEDDSNMEMTGFDGSATGDVNISGGE 434
DENNAVAPKMEPEFVNESMW YGEDDSNMEMTGFDGSATGDVNISGGE
Sbjct: 213 DENNAVAPKMEPEFVNESMWDDDEDGTNNDETNYGEDDSNMEMTGFDGSATGDVNISGGE 272
Query: 435 GGAVGDAQ-VRFGLSNRGHLVVHVGDTSSLNTSAIGRKLDGPAAKRIQLGCRASITT 602
GGAVGDAQ FG S RG V+ + G K AK CR+SI T
Sbjct: 273 GGAVGDAQDPFFGTSCRGRPVIVYQNYRFHLHQKYGEKTSWRCAKWRNGFCRSSIVT 329
>UniRef50_Q14QL4 Cluster: Hypothetical cation-transporting p-type
atpase n-terminal truncated transmembrane protein; n=1;
Spiroplasma citri|Rep: Hypothetical cation-transporting
p-type atpase n-terminal truncated transmembrane protein
- Spiroplasma citri
Length = 374
Score = 37.1 bits (82), Expect = 0.41
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = -2
Query: 359 SVISFVIVRAIFIVIPHTLINKLWFHFGSDSIVLISSGIVTNSSFAEPEGPASSGSTHF 183
+V++F+I+ I + P +N LWF+ ++++ IS G+ N + E P S T F
Sbjct: 172 NVLAFIIISVITKIKPFDSVNILWFNLVIETLMSISIGLGNNDNGLMLEKPRSKKETFF 230
>UniRef50_UPI0000DBFFDF Cluster: UPI0000DBFFDF related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFFDF UniRef100 entry -
Rattus norvegicus
Length = 423
Score = 36.3 bits (80), Expect = 0.71
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 348 FRHCSCHLHRHP-TYSH*QTLVPFWERQHCSHLVWYRHK 235
++H H H H T+SH T PFW R SH + H+
Sbjct: 351 YKHTHTHTHTHTLTHSHTHTHAPFWMRMRTSHTHTHSHR 389
>UniRef50_Q0B234 Cluster: YadA C-terminal domain protein; n=2;
Burkholderia ambifaria|Rep: YadA C-terminal domain
protein - Burkholderia cepacia (strain ATCC 53795 /
AMMD)
Length = 1117
Score = 34.7 bits (76), Expect = 2.2
Identities = 28/68 (41%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 393 DGSATG--DVNISGGEGGAVGDAQVRFGLSNRGHLVVHVGDTSSLNTSAIGRKLDGPAAK 566
+GSATG DV ISG GGA A G++ G V TS LN A+G AA
Sbjct: 82 NGSATGTGDVAISGA-GGAAATASGGLGVAIGGGAV-----TSGLNAMALGTNAHSSAAG 135
Query: 567 RIQLGCRA 590
I +G A
Sbjct: 136 AISMGANA 143
>UniRef50_A6C9B8 Cluster: Cytochrome d ubiquinol oxidase, subunit
II; n=1; Planctomyces maris DSM 8797|Rep: Cytochrome d
ubiquinol oxidase, subunit II - Planctomyces maris DSM
8797
Length = 346
Score = 34.7 bits (76), Expect = 2.2
Identities = 17/49 (34%), Positives = 32/49 (65%)
Frame = -2
Query: 386 SHFHIRIVLSVISFVIVRAIFIVIPHTLINKLWFHFGSDSIVLISSGIV 240
S F++ + + V+ +I RAI I +PH L + LW HF + ++ ++SG++
Sbjct: 78 SGFYLPLTM-VVWLLIFRAISIELPHYLSDSLWIHFW-NLMLFVASGLL 124
>UniRef50_A6VL95 Cluster: Putative uncharacterized protein; n=1;
Actinobacillus succinogenes 130Z|Rep: Putative
uncharacterized protein - Actinobacillus succinogenes
130Z
Length = 1304
Score = 33.5 bits (73), Expect = 5.0
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +3
Query: 429 GEGGAVGDAQVRFGLSNRGHLVVHVGDTSSLNTSAIGRKLDGPAAKRIQLG 581
G GG++G A + GLS G +V ++G+T ++ +G G ++K + G
Sbjct: 1203 GSGGSIGAALLGMGLSKSGKVVGNIGETFGISDLNLGTAGVGDSSKVVVSG 1253
>UniRef50_A0PSS0 Cluster: PPE family protein; n=1; Mycobacterium
ulcerans Agy99|Rep: PPE family protein - Mycobacterium
ulcerans (strain Agy99)
Length = 1510
Score = 33.5 bits (73), Expect = 5.0
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +3
Query: 384 TGFDGSATGDVNISGGEGGAVGDAQVRFGLSNRGHLVVHVGDTSSLNTSAIG 539
+G SATG V G GGA A G+ N G + VGD +++N S+IG
Sbjct: 228 SGSSASATGGVLNIAGVGGANSSASATGGI-NIGTGALAVGDGNTVNASSIG 278
>UniRef50_UPI0000E80594 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 273
Score = 33.1 bits (72), Expect = 6.6
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -2
Query: 236 NSSFAEPEGPASSGSTHFRFAGPL 165
NS EP GP S S HF FAGP+
Sbjct: 74 NSHCEEPPGPKSEESAHFPFAGPI 97
>UniRef50_UPI0000F1D84E Cluster: PREDICTED: similar to Secretory
carrier membrane protein 2, like; n=1; Danio rerio|Rep:
PREDICTED: similar to Secretory carrier membrane protein
2, like - Danio rerio
Length = 278
Score = 32.7 bits (71), Expect = 8.8
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -2
Query: 413 ISSCRAIKTSHFHIRIVLSVISFVIVRAIFIVIPHTLINKLWFHFGSD---SIVLISSGI 243
I++ IKT+ ++ V F V A+F VI +++ ++ H G+ + S G+
Sbjct: 196 ITAISVIKTNIALSVFMMVVAGFFTVNAVFSVILLKMVHSMYRHTGASFQKAQEEFSQGV 255
Query: 242 VTNSSFAEPEGPASSGSTHFRF 177
VTN SF A+S + F
Sbjct: 256 VTNRSFQSAAATAASTAVQGAF 277
>UniRef50_A6G372 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 135
Score = 32.7 bits (71), Expect = 8.8
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = +3
Query: 414 VNISGGEGGAVGDAQVRFGLSNRGHLVVHVGDTSSLNTSAIG 539
V SGGEG AVG G S+RG + VH DT L+ S +G
Sbjct: 35 VTRSGGEGRAVGG-----GGSSRGGIGVHAVDTEQLSDSLVG 71
>UniRef50_Q7R6G5 Cluster: GLP_170_208281_203902; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_170_208281_203902 - Giardia
lamblia ATCC 50803
Length = 1459
Score = 32.7 bits (71), Expect = 8.8
Identities = 19/81 (23%), Positives = 33/81 (40%)
Frame = -2
Query: 293 LWFHFGSDSIVLISSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDAIDGLFGLL 114
L H ++ V ISS + N + P GP +S + + + + L + +
Sbjct: 558 LKMHSYNNQTVTISSSDIANKPLSMPSGPLTSSKKNVPRSTSVESKGSLLSGVSSGIRIA 617
Query: 113 TATGVEEGLESRSVSNLVITD 51
T + L + + NLVI D
Sbjct: 618 TKLSTDSKLSQKKIVNLVIKD 638
>UniRef50_A7EQG9 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 358
Score = 32.7 bits (71), Expect = 8.8
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 357 GEDDSNMEMTGFDGSATGDVNISGGEGGAVGDAQ 458
G D TG+ TGD NI GG GG D+Q
Sbjct: 195 GFDGVKASSTGYGNDVTGDRNILGGYGGVESDSQ 228
>UniRef50_Q92797 Cluster: Symplekin; n=89; Eukaryota|Rep: Symplekin -
Homo sapiens (Human)
Length = 1274
Score = 32.7 bits (71), Expect = 8.8
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = -2
Query: 254 SSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDAIDGLFGLLTATGVEEGLE 84
SS + S A P P S + FR GP CE +F ++D GL A ++ LE
Sbjct: 1168 SSSSPSPSPSARPGPPPSEEAMDFREEGPECETPGIFISMDDDSGLTEAALLDSSLE 1224
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,364,919
Number of Sequences: 1657284
Number of extensions: 12771312
Number of successful extensions: 37566
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 35732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37493
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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