Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0913
         (693 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-592|AAS64618.1| 1205|Drosophila melanogaster CG3304-PC,...    32   0.85 
AY058260-1|AAL13489.1|  407|Drosophila melanogaster GH01724p pro...    30   3.4  
AE013599-417|AAF59249.1|  407|Drosophila melanogaster CG11139-PA...    30   3.4  
AE014298-2955|AAZ52487.1|  572|Drosophila melanogaster CG33517-P...    29   6.0  

>AE014134-592|AAS64618.1| 1205|Drosophila melanogaster CG3304-PC,
            isoform C protein.
          Length = 1205

 Score = 31.9 bits (69), Expect = 0.85
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = -1

Query: 342  HCSCHLH---RHPTYSH*QTLVPFWERQHCSHLVWYRHKFVFCRTRGTCFQ 199
            H S H H   RH  + H Q L+P  ++QH  H  W+  K +    RGT  Q
Sbjct: 943  HGSQHHHHDARHSHHHHHQPLLPHHQQQHPHH--WHHRKALLQSGRGTATQ 991


>AY058260-1|AAL13489.1|  407|Drosophila melanogaster GH01724p
           protein.
          Length = 407

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 396 GSATGDVNISGGEGGAVGDAQVRFGLSNRGHLVV 497
           G +T   + SGG GGAV    +R G+++  H  V
Sbjct: 167 GPSTSSGSASGGSGGAVWGQGMRLGMTDNDHTAV 200


>AE013599-417|AAF59249.1|  407|Drosophila melanogaster CG11139-PA
           protein.
          Length = 407

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 396 GSATGDVNISGGEGGAVGDAQVRFGLSNRGHLVV 497
           G +T   + SGG GGAV    +R G+++  H  V
Sbjct: 167 GPSTSSGSASGGSGGAVWGQGMRLGMTDNDHTAV 200


>AE014298-2955|AAZ52487.1|  572|Drosophila melanogaster CG33517-PE,
           isoform E protein.
          Length = 572

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 384 TGFDGSATGDVNISGGEGGAVG 449
           T +DG  +GDV ++GG  G  G
Sbjct: 31  TSYDGGGSGDVGVAGGLAGTAG 52


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,481,719
Number of Sequences: 53049
Number of extensions: 598487
Number of successful extensions: 1889
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1887
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)