Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0913
         (693 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    27   0.22 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    27   0.22 
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    27   0.22 
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    25   0.90 
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    22   4.8  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    22   4.8  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   6.4  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   6.4  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 10/21 (47%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = +2

Query: 497 PRGRYKFIKHECYRKKI-RWT 556
           PRG+Y+F K++  +KK+  WT
Sbjct: 144 PRGKYEFSKYDKLKKKLEEWT 164


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 10/21 (47%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = +2

Query: 497 PRGRYKFIKHECYRKKI-RWT 556
           PRG+Y+F K++  +KK+  WT
Sbjct: 159 PRGKYEFSKYDKLKKKLEEWT 179


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 10/21 (47%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = +2

Query: 497 PRGRYKFIKHECYRKKI-RWT 556
           PRG+Y+F K++  +KK+  WT
Sbjct: 47  PRGKYEFSKYDKLKKKLEEWT 67


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -2

Query: 422 NINISSCRAIKTSHFHIRIVLSVISFVIVRAIFIVIPHTLI 300
           N  +S  R  +++  H   ++  +SF IV   +I+I  TL+
Sbjct: 388 NSEVSKSRTKESAWRHFAAIIEWLSFFIVIFTYIIILITLV 428


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -2

Query: 119 LLTATGVEEGLESRSVSNLVITDCLCCDDLGPGLEVGSC 3
           +L     +EG +    +N+V+T    C  + PG+   +C
Sbjct: 141 ILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTC 179


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -2

Query: 119 LLTATGVEEGLESRSVSNLVITDCLCCDDLGPGLEVGSC 3
           +L     +EG +    +N+V+T    C  + PG+   +C
Sbjct: 141 ILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTC 179


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 244 IPDEMRTMLSLPKWNQS 294
           +PD+MRT+   PK  +S
Sbjct: 30  MPDDMRTVTKRPKTKKS 46


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
          protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = -2

Query: 50 CLCCDDL-GPG 21
          C CCD+L GPG
Sbjct: 13 CWCCDNLGGPG 23



 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 396 GSATGDVNISGGEGGAVGDAQVRFGLSNRGHLVV 497
           G++ G + +    GG  G   +  GLS    LVV
Sbjct: 33  GASGGSIVVGANNGGGGGGLGIASGLSAMLSLVV 66


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,669
Number of Sequences: 438
Number of extensions: 3798
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)