Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0911
         (692 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   3.6  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   6.4  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   8.4  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   8.4  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   8.4  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   8.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   8.4  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 74  GKESHMSVLINFKTFSLVQNNVSLLF 151
           G  + + +LI FK+FSL+  N +LLF
Sbjct: 130 GNSTIIFLLIRFKSFSLL--NFNLLF 153


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 593 PKSFPRNISSSNYDL 549
           PK FP NI  ++Y L
Sbjct: 654 PKEFPANIEGTSYFL 668


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 645 AKIFVLYESYPCHAAVSSEIVST 577
           A +F  + S  C A  SS+ VST
Sbjct: 340 AALFAKFPSLACAAEPSSDAVST 362


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = +2

Query: 59  MFYSRGKESHMSVLINFKTFSLVQNNVSLLFHHSLLYKCNCFIDCK 196
           +F+S  KE H   +I    +  +  N S+L+   +    +C ++ K
Sbjct: 120 LFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLK 165


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = +2

Query: 59  MFYSRGKESHMSVLINFKTFSLVQNNVSLLFHHSLLYKCNCFIDCK 196
           +F+S  KE H   +I    +  +  N S+L+   +    +C ++ K
Sbjct: 120 LFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLK 165


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +2

Query: 5   TSLNKDITMLQTSF*NVVMFYSRGKESHMSVLINFKT--FSLVQNNVSL 145
           T  NK+  ML+T+  NV+  +    E ++   +N  T  + +++ N  L
Sbjct: 82  TLSNKEYNMLRTTAINVIRHFGIVGECNIQYALNPNTEEYYIIEVNARL 130


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 170 KCNCFIDCKFKVL 208
           +CNC IDC  +V+
Sbjct: 477 RCNCDIDCINRVV 489


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,633
Number of Sequences: 438
Number of extensions: 3651
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)