Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0910
(693 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 82 1e-14
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 82 1e-14
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 82 1e-14
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 81 2e-14
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 54 3e-06
UniRef50_P0AE33 Cluster: Arginine transport system permease prot... 52 2e-05
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 51 2e-05
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 42 0.011
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 41 0.025
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 40 0.058
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 40 0.058
UniRef50_A0D095 Cluster: Chromosome undetermined scaffold_33, wh... 34 2.9
UniRef50_A0L468 Cluster: A/G-specific adenine glycosylase; n=1; ... 34 3.8
UniRef50_A7IJE2 Cluster: Bilirubin oxidase precursor; n=2; Alpha... 33 6.6
UniRef50_Q7QV19 Cluster: GLP_180_31150_25868; n=1; Giardia lambl... 33 8.8
UniRef50_P45089 Cluster: Arginine transport system permease prot... 33 8.8
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 81.8 bits (193), Expect = 1e-14
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 255 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRT 365
ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR+
Sbjct: 32 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRS 68
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 81.8 bits (193), Expect = 1e-14
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 255 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRT 365
ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR+
Sbjct: 36 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRS 72
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 81.8 bits (193), Expect = 1e-14
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 255 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRT 365
ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR+
Sbjct: 18 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRS 54
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 81.4 bits (192), Expect = 2e-14
Identities = 36/36 (100%), Positives = 36/36 (100%)
Frame = +3
Query: 255 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 362
ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 78 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 113
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 54.4 bits (125), Expect = 3e-06
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +3
Query: 255 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRT 365
ENP +TQ +RL AHPPF SWR+ E A+ DRPS Q +T
Sbjct: 25 ENPQITQYHRLEAHPPFHSWRDVESAQKDRPSPQQQT 61
>UniRef50_P0AE33 Cluster: Arginine transport system permease protein
artM; n=21; Gammaproteobacteria|Rep: Arginine transport
system permease protein artM - Shigella flexneri
Length = 222
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +1
Query: 1 IYLVVNGLLTLMMRLIERKAWXFERRN 81
IYLVVNGLLTLMMRLIERKA FERRN
Sbjct: 196 IYLVVNGLLTLMMRLIERKALAFERRN 222
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/47 (63%), Positives = 34/47 (72%), Gaps = 7/47 (14%)
Frame = +1
Query: 256 KTLALPNLIALQHIPLSPAGVIAK-----RPAP--IALPNSCAPEWR 375
KTLALPNLIALQHIPLSPAGVI++ RP+ +L APEWR
Sbjct: 16 KTLALPNLIALQHIPLSPAGVISEEARTDRPSQQLRSLKWRMAPEWR 62
Score = 34.3 bits (75), Expect = 2.9
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2
Query: 224 HWPSFYNVVTGKPWRYP 274
HWPSFYNVVTGK P
Sbjct: 5 HWPSFYNVVTGKTLALP 21
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 42.3 bits (95), Expect = 0.011
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +3
Query: 258 NPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 362
N +T LNRL AHP FASWR+ AR + PS + R
Sbjct: 25 NQTITHLNRLPAHPVFASWRDELAARDNLPSSRRR 59
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 41.1 bits (92), Expect = 0.025
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +3
Query: 312 WRNSEEARTDRPSQQLRT 365
WRNSEEARTDRPSQQLR+
Sbjct: 47 WRNSEEARTDRPSQQLRS 64
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 39.9 bits (89), Expect = 0.058
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 255 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPS 350
+NP +T +NRL +H P WR+++ AR PS
Sbjct: 28 QNPAITSVNRLPSHTPLHGWRDADRARRGEPS 59
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 39.9 bits (89), Expect = 0.058
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = -2
Query: 383 FAIRHSGAQLLGRAIGAGLFAITPAGERG 297
FAI+ AQLLGRAIGAGLFAITP E G
Sbjct: 12 FAIQ--AAQLLGRAIGAGLFAITPEFELG 38
>UniRef50_A0D095 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_33,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1173
Score = 34.3 bits (75), Expect = 2.9
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -1
Query: 495 VYSFDL*GILPISAYWLKNELI*QKFNANFNKILTLTICHSPFR 364
+++F L G L +WLKN+ KF++ F ++L L + + FR
Sbjct: 665 IFNFSLQGALSYIDFWLKNQHFDDKFSSTFTQLLLLALGVTVFR 708
>UniRef50_A0L468 Cluster: A/G-specific adenine glycosylase; n=1;
Magnetococcus sp. MC-1|Rep: A/G-specific adenine
glycosylase - Magnetococcus sp. (strain MC-1)
Length = 365
Score = 33.9 bits (74), Expect = 3.8
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -3
Query: 262 GFSSHDVVKRRPVNCNTTHYRANWVPGPAASGTGTVLMSDATWRVLSDL-QNPPANVRSH 86
G +++ +PV+ TH+R P + +G +++DA W L+ L Q P A +
Sbjct: 291 GIQGQPLLEAQPVDHIFTHFRLTVYPILVVAASGAPILNDANWWPLAQLDQRPIATLHRK 350
Query: 85 IN 80
+N
Sbjct: 351 VN 352
>UniRef50_A7IJE2 Cluster: Bilirubin oxidase precursor; n=2;
Alphaproteobacteria|Rep: Bilirubin oxidase precursor -
Xanthobacter sp. (strain Py2)
Length = 506
Score = 33.1 bits (72), Expect = 6.6
Identities = 16/52 (30%), Positives = 20/52 (38%)
Frame = -3
Query: 241 VKRRPVNCNTTHYRANWVPGPAASGTGTVLMSDATWRVLSDLQNPPANVRSH 86
VK T H+ VPGP G + TWR L + P A + H
Sbjct: 97 VKNELAETTTVHWHGLLVPGPLDGGPHQPISPGQTWRPLLPIDQPAATLMYH 148
>UniRef50_Q7QV19 Cluster: GLP_180_31150_25868; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_180_31150_25868 - Giardia lamblia
ATCC 50803
Length = 1760
Score = 32.7 bits (71), Expect = 8.8
Identities = 25/98 (25%), Positives = 36/98 (36%)
Frame = -3
Query: 376 FAIQVRNCWEGRSVRASSLLRQLAKGGCAARRLSWVTPGFSSHDVVKRRPVNCNTTHYRA 197
FA+ + NCW + Q A G +RR P + RR +C
Sbjct: 1418 FAVAICNCWAALCSDMPYIYLQKALGSYLSRRHGGTAP-------IVRRACSCPAAGATF 1470
Query: 196 NWVPGPAASGTGTVLMSDATWRVLSDLQNPPANVRSHI 83
N++P P +G +D W V S + SHI
Sbjct: 1471 NFIPNPGTPRSGVYSHND--WSVESMYLLDATKILSHI 1506
>UniRef50_P45089 Cluster: Arginine transport system permease protein
artM; n=68; Gammaproteobacteria|Rep: Arginine transport
system permease protein artM - Haemophilus influenzae
Length = 227
Score = 32.7 bits (71), Expect = 8.8
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 1 IYLVVNGLLTLMMRLIERKAWXFER 75
IYL++ G+ TL++R +E+K FER
Sbjct: 197 IYLIITGIATLLLRKLEKKVLAFER 221
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,677,274
Number of Sequences: 1657284
Number of extensions: 15808215
Number of successful extensions: 38032
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 36793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38025
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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