Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0909
         (686 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC109087-1|AAI09088.1|  765|Homo sapiens zinc finger protein 509...    30   8.9  
AK127560-1|BAC87035.1|  765|Homo sapiens protein ( Homo sapiens ...    30   8.9  

>BC109087-1|AAI09088.1|  765|Homo sapiens zinc finger protein 509
           protein.
          Length = 765

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = -2

Query: 226 NLSQITYFKKNDMFHTAARNMQEIV*VASVIIYKSYLNLNFDN 98
           +L Q +  +KND+FH   +N+  I  +    +Y S+L+LN DN
Sbjct: 52  SLFQNSSSQKNDVFHLDVKNVSGIGQILD-FMYTSHLDLNQDN 93


>AK127560-1|BAC87035.1|  765|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45653 fis, clone CTONG2011801, moderately
           similar to Zinc finger protein 91. ).
          Length = 765

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = -2

Query: 226 NLSQITYFKKNDMFHTAARNMQEIV*VASVIIYKSYLNLNFDN 98
           +L Q +  +KND+FH   +N+  I  +    +Y S+L+LN DN
Sbjct: 52  SLFQNSSSQKNDVFHLDVKNVSGIGQILD-FMYTSHLDLNQDN 93


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,647,272
Number of Sequences: 237096
Number of extensions: 1819092
Number of successful extensions: 2073
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2069
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)