Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0906
         (652 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22802 Cluster: Putative uncharacterized protein; n=5; ...    36   0.64 
UniRef50_Q8I255 Cluster: Putative uncharacterized protein PFA043...    34   3.4  
UniRef50_Q8IBJ6 Cluster: Putative uncharacterized protein MAL7P1...    33   5.9  
UniRef50_Q23NI1 Cluster: Putative uncharacterized protein; n=3; ...    33   5.9  

>UniRef50_Q22802 Cluster: Putative uncharacterized protein; n=5;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 613

 Score = 36.3 bits (80), Expect = 0.64
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = -1

Query: 529 LDFIIGGYFYGTRYILY*YLFYVNNKISIVIFHKHNGAIIIYLLSFLKCICL 374
           L F+ G Y Y T Y +   +F++NN+  +V    H+G   ++   F +CI L
Sbjct: 394 LFFLAGEYIYSTAYAI---MFFLNNEFPLVAREYHDGLYNLWTYYFARCISL 442


>UniRef50_Q8I255 Cluster: Putative uncharacterized protein PFA0430c;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFA0430c - Plasmodium falciparum
           (isolate 3D7)
          Length = 1152

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 26/83 (31%), Positives = 42/83 (50%)
 Frame = -1

Query: 544 YLTFILDFIIGGYFYGTRYILY*YLFYVNNKISIVIFHKHNGAIIIYLLSFLKCICLFNA 365
           +L  ++ +I+   F    Y LY   + +  K S+    K+  +  +Y+ + LK I L+N 
Sbjct: 525 FLIILILYILKYVFKKMMYKLYYNKYGMGKKYSL----KNQESENMYMQNLLKRI-LYNV 579

Query: 364 TKKNVLTNYLLALT*IIENRSTL 296
            KK VL+NY   L  I+EN   L
Sbjct: 580 EKKKVLSNYESILQDILENTDNL 602


>UniRef50_Q8IBJ6 Cluster: Putative uncharacterized protein
           MAL7P1.142; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL7P1.142 - Plasmodium
           falciparum (isolate 3D7)
          Length = 418

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
 Frame = -1

Query: 538 TFILDFIIGGYFYGTRY---ILY*YLFYVNNKISIVIFHKHNGAIIIYLLSFL 389
           TFI+ FI   YFY + Y   +LY   +++   +S ++FH      I++++SFL
Sbjct: 339 TFIVHFISFFYFYRSYYFTPLLYRSFYFILLLLSFILFHSF--TFIVHIISFL 389


>UniRef50_Q23NI1 Cluster: Putative uncharacterized protein; n=3;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 395

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -1

Query: 466 YVNNKISIVIFHKHNGAIIIYLLSFLKCICLFNATKKNVLTNY 338
           Y++N+   + F KH   +I YL+  +K   +F    KNVL ++
Sbjct: 232 YISNRKPTLFFFKHQHQLITYLIGRIKTQIMFLMNDKNVLDSF 274


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,514,907
Number of Sequences: 1657284
Number of extensions: 9992449
Number of successful extensions: 16250
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16245
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)