Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0906
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.10 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   3.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   6.7  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.8  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   8.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = -1

Query: 556 MCLVYLTFILDFIIGGYFYGTRYILY--*YLFYVNNKISIVIFHKHNGAIIIYLLSFLKC 383
           +CL Y T  L F+   Y++ + +I++    LFY    I + I++ +  A I++ +  L  
Sbjct: 197 LCLDYFTLHLLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYFYY-AFILFTVHLLLL 255

Query: 382 ICLF 371
           +C++
Sbjct: 256 VCIY 259


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 236 IKTQKFCSIRKKNCASFMI 292
           I  Q    I  KNCASF+I
Sbjct: 198 INEQMAVRINPKNCASFVI 216


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +1

Query: 535 KLNIRDTSIFLNINFV 582
           K+N++ + IF+N+ F+
Sbjct: 122 KINVQQSGIFINLPFL 137


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 129 EIVLVETKTNTK 94
           E+VL +TK NTK
Sbjct: 89  ELVLTDTKQNTK 100


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 129 EIVLVETKTNTK 94
           E+VL +TK NTK
Sbjct: 89  ELVLTDTKQNTK 100


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -2

Query: 171 SNHPFNISR 145
           SNHPF+I+R
Sbjct: 366 SNHPFSINR 374


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,101
Number of Sequences: 336
Number of extensions: 3299
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)