Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0905
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.4  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.4  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.1  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   5.5  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   5.5  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.2  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.2  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.2  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.2  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 535 HFDVHFQL*HASLLWCCSSIPYSYGLIYRACS*Y 434
           HF   F +    LL+CC+ I ++  L++  C  Y
Sbjct: 168 HFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDY 201


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 174 PVVLERYNLETVSNPVKPIYSF 239
           P +L ++NL  + N VKPI +F
Sbjct: 112 PKLLLKHNLFLLDNIVKPIIAF 133


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 2/25 (8%)
 Frame = -2

Query: 417 DHCMSSTELVCP--TRGRWSTVQVP 349
           DH   +T    P  T   WSTVQ P
Sbjct: 289 DHIQQATPYSAPGPTYSTWSTVQTP 313


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -1

Query: 322 VSSAVSSCQHT*FSRTPIESETLC*CPLNEYIGLT 218
           +  A+  C H  +    I +ET    PLNE   +T
Sbjct: 43  IDPALQFCTHLIYGYAGINAETFKAQPLNELFDVT 77


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -1

Query: 325 NVSSAVSSCQHT*FSRTPIESETLC*CPLNE 233
           ++  A+  C H  +    I+ ET    PLNE
Sbjct: 47  DLEPALQYCTHLIYGYAAIDEETYKLTPLNE 77


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 651 IQTSHCTSYISG 686
           ++ SHC SY+ G
Sbjct: 244 VKLSHCNSYVDG 255


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +2

Query: 632 IVLQWVHSNITLHQLHQW 685
           +VL + H    +H++ QW
Sbjct: 294 VVLNYHHRTADIHEMPQW 311


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +2

Query: 632 IVLQWVHSNITLHQLHQW 685
           +VL + H    +H++ QW
Sbjct: 294 VVLNYHHRTADIHEMPQW 311


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +2

Query: 632 IVLQWVHSNITLHQLHQW 685
           +VL + H    +H++ QW
Sbjct: 294 VVLNYHHRTADIHEMPQW 311


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +2

Query: 632 IVLQWVHSNITLHQLHQW 685
           +VL + H    +H++ QW
Sbjct: 294 VVLNYHHRTADIHEMPQW 311


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +2

Query: 632 IVLQWVHSNITLHQLHQW 685
           +VL + H    +H++ QW
Sbjct: 294 VVLNYHHRTADIHEMPQW 311


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
 Frame = -2

Query: 498 FCGAALVSHILMVLSTEHVANTFLSFGD--HCMSSTELVCPTRGRWSTVQV 352
           +C    V       S  H    F +  +  HC  ++ELV   + R+ T+ V
Sbjct: 507 YCTVLRVQRFNNYQSLAHYLRVFFTVFNVVHCYLASELVLMLKNRFVTLNV 557


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 326 HIWRPNEGGTWTVDQ 370
           ++W  + GG++TV Q
Sbjct: 153 YVWESSAGGSFTVTQ 167


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 520 FQL*HASLLWCCSSIPYSYGLIYRACS 440
           +++ H ++LW C+S      LI  A S
Sbjct: 249 YEMYHLAILWSCTSTNCPRFLIMLALS 275


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,190
Number of Sequences: 336
Number of extensions: 4506
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)