Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0905
(694 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 105 2e-23
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 53 2e-07
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 48 4e-06
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 47 1e-05
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 46 2e-05
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 46 3e-05
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 46 3e-05
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 45 4e-05
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 45 4e-05
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 44 7e-05
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 44 7e-05
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 44 1e-04
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 44 1e-04
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 43 2e-04
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 43 2e-04
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 43 2e-04
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 43 2e-04
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 42 3e-04
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 42 3e-04
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 42 3e-04
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 42 3e-04
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 42 3e-04
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 42 3e-04
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 42 3e-04
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 42 4e-04
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 42 5e-04
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 41 7e-04
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 41 7e-04
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 41 7e-04
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 41 7e-04
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 41 7e-04
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 41 7e-04
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 41 7e-04
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 41 7e-04
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 41 9e-04
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 41 9e-04
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 41 9e-04
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 41 9e-04
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 40 0.002
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 40 0.002
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 40 0.002
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 40 0.002
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 39 0.003
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 39 0.003
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 39 0.003
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 39 0.003
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 39 0.003
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 39 0.003
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 39 0.004
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 39 0.004
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 39 0.004
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 39 0.004
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 38 0.005
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 38 0.005
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 38 0.005
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 38 0.005
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 38 0.005
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 38 0.006
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 38 0.006
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 38 0.008
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 38 0.008
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 37 0.011
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 37 0.011
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 37 0.015
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 37 0.015
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 37 0.015
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 37 0.015
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 37 0.015
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 37 0.015
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 37 0.015
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 37 0.015
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 37 0.015
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 36 0.019
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 36 0.019
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 36 0.019
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 36 0.019
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 36 0.019
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 36 0.019
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 36 0.019
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 36 0.019
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 36 0.019
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 36 0.019
At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pf... 36 0.025
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 36 0.025
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 36 0.025
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 36 0.025
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 36 0.025
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 36 0.025
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 36 0.025
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 36 0.025
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 36 0.025
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 36 0.034
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 36 0.034
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 36 0.034
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 35 0.045
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 35 0.045
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 35 0.045
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 35 0.045
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 35 0.045
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 35 0.059
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 34 0.078
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 34 0.078
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 34 0.078
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 34 0.078
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 34 0.10
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 34 0.10
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 34 0.10
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 34 0.10
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 33 0.14
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 33 0.14
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 33 0.18
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 33 0.18
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 33 0.18
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 33 0.24
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 33 0.24
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 33 0.24
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 33 0.24
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 32 0.31
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 32 0.31
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 32 0.31
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 32 0.31
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 32 0.31
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 32 0.31
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 32 0.31
At3g56990.1 68416.m06344 glycine-rich protein conserved hypothet... 32 0.31
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 32 0.31
At5g57090.1 68418.m07128 auxin transport protein (EIR1) identica... 32 0.41
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 32 0.41
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 32 0.41
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 32 0.41
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 32 0.41
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 32 0.41
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 32 0.41
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 32 0.41
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 32 0.41
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 31 0.55
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 31 0.55
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 31 0.55
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 31 0.55
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 31 0.55
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 31 0.55
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 31 0.73
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 31 0.73
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 31 0.73
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 31 0.73
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 31 0.73
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 31 0.96
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 31 0.96
At5g27960.1 68418.m03367 MADS-box protein (AGL90) 31 0.96
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 31 0.96
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 31 0.96
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 31 0.96
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 31 0.96
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 31 0.96
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 31 0.96
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 31 0.96
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 31 0.96
At5g26580.1 68418.m03186 MADS-box protein (AGL34) MADS box prote... 30 1.3
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 30 1.3
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 30 1.3
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 30 1.3
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 30 1.7
At4g01530.1 68417.m00198 hypothetical protein 30 1.7
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 30 1.7
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 30 1.7
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 30 1.7
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 29 2.2
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 29 2.2
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 29 2.9
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 29 3.9
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 29 3.9
At5g01260.2 68418.m00035 glycoside hydrolase starch-binding doma... 29 3.9
At5g01260.1 68418.m00034 glycoside hydrolase starch-binding doma... 29 3.9
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 29 3.9
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 29 3.9
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 29 3.9
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 28 5.1
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 28 5.1
At5g12920.1 68418.m01482 expressed protein contains 3 weak WD-40... 28 5.1
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 28 5.1
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 28 5.1
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 28 5.1
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 28 5.1
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 28 5.1
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 28 5.1
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 28 5.1
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 28 5.1
At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1 ... 28 6.8
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 28 6.8
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 28 6.8
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 28 6.8
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 28 6.8
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 28 6.8
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 27 8.9
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 27 8.9
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 27 8.9
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 27 8.9
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 27 8.9
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 27 8.9
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 27 8.9
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 27 8.9
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 27 8.9
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 27 8.9
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 27 8.9
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 27 8.9
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 27 8.9
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 27 8.9
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 105 bits (253), Expect = 2e-23
Identities = 42/83 (50%), Positives = 56/83 (67%)
Frame = +2
Query: 254 KGFALDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERN 433
+G+A+DW P +G L +GDC+ IH+W P G+W VD P GHT+SVED+QWSP E N
Sbjct: 225 EGYAIDWSPATAGRLLSGDCKSMIHLWEP-ASGSWAVDPIPFAGHTASVEDLQWSPAEEN 283
Query: 434 VLATCSVDKTIRIWDTRAAPQKA 502
V A+CSVD ++ +WD R A
Sbjct: 284 VFASCSVDGSVAVWDIRLGKSPA 306
Score = 54.4 bits (125), Expect = 7e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +1
Query: 523 AHQSDINVISWNG-KEPFIASGGDDGFLHIWDLRQFT-NSTPVGTFKHHTAPVTSVEW 690
AH +D+NVISWN +ASG DDG I DLR V F++H P+TS+EW
Sbjct: 311 AHNADVNVISWNRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEW 368
Score = 36.3 bits (80), Expect = 0.019
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 526 HQSDINVISWN-GKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
H + + + W+ +E AS DG + +WD+R +P +FK H A V + W+
Sbjct: 268 HTASVEDLQWSPAEENVFASCSVDGSVAVWDIR--LGKSPALSFKAHNADVNVISWN 322
Score = 35.5 bits (78), Expect = 0.034
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +3
Query: 87 KNSVLAASWSELGRVDIWNITQQLQAVDDPVVLERYNLETVSNPVKPIYSFNGHQ 251
+NS + SW++ G V +W+++ L A+ + + V N P+ +F+GH+
Sbjct: 170 QNSHICVSWADSGHVQVWDMSSHLNALAESETEGKDGTSPVLNQA-PLVNFSGHK 223
Score = 33.1 bits (72), Expect = 0.18
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +2
Query: 266 LDWCPTESGMLATG--DCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVL 439
+ W S MLA+G D I R +GG V H + I+WS +E + L
Sbjct: 319 ISWNRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEY--HKHPITSIEWSAHEASTL 376
Query: 440 ATCSVDKTIRIWD 478
A S D + IWD
Sbjct: 377 AVTSGDNQLTIWD 389
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = +2
Query: 296 LATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
LA+G + IW G L GHT SV+ + W P +++AT S DK++R+W
Sbjct: 35 LASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDLVATASGDKSVRLW 94
Query: 476 DTRAAPQKACMSQLKM 523
D R+ C Q+++
Sbjct: 95 DARSG---KCTQQVEL 107
Score = 34.7 bits (76), Expect = 0.059
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +1
Query: 496 KGLHVTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG-TFKHHTAP 672
K LH H+ ++ ++WN +ASG D IW++ +S K HT
Sbjct: 9 KSLHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDS 68
Query: 673 VTSVEW 690
V + W
Sbjct: 69 VDQLCW 74
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 48.4 bits (110), Expect = 4e-06
Identities = 29/72 (40%), Positives = 39/72 (54%)
Frame = +2
Query: 266 LDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLAT 445
L+W P +S MLA+G +HIW G TV L GH S V+ + W P + +A+
Sbjct: 124 LNWSPDDS-MLASGSLDNTVHIWNMRTGMCTTV----LRGHLSLVKGVTWDP-IGSFIAS 177
Query: 446 CSVDKTIRIWDT 481
S DKT+ IW T
Sbjct: 178 QSDDKTVIIWRT 189
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKV 535
L GHT+ V D+ WSP++ ++LA+ S+D T+ IW+ R C + L+ H+ +
Sbjct: 114 LRGHTADVVDLNWSPDD-SMLASGSLDNTVHIWNMRTG---MCTTVLRGHLSL 162
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW 690
H +D+ ++W+ + +ASG D +HIW++R +T + H + V V W
Sbjct: 117 HTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTT---VLRGHLSLVKGVTW 168
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGT 651
H +N + W ++ASG DD + I + + + +T G+
Sbjct: 58 HFGSVNCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGS 99
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 499 GLHVTAENAHQSDINVISWNGKEPFIASGGDDGFLHIW 612
G+ T H S + ++W+ FIAS DD + IW
Sbjct: 150 GMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIW 187
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +2
Query: 254 KGFALDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLV--GHTSSVEDIQWSPNE 427
+G+ L W P + G L +G + I +W + V V GH S++ D+ W
Sbjct: 170 EGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKN 229
Query: 428 RNVLATCSVDKTIRIWDTRAAPQKACMSQLKMH 526
N+ + D + IWDTR Q+K+H
Sbjct: 230 ENLFGSAGEDGRLVIWDTRT---NQMQHQVKVH 259
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQL 517
LVGH + WSP + L + S D+ I +WD A PQ ++ +
Sbjct: 164 LVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAM 210
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLY-HGME 562
H V ++W PN VLA+ D+ + +WD ++ +L +L+ HG
Sbjct: 303 HEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGH 362
Query: 563 KSHL 574
K+ +
Sbjct: 363 KAKI 366
Score = 35.1 bits (77), Expect = 0.045
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Frame = +2
Query: 260 FALDWCPTESGMLATGDCRRDIHIWRPNEGGTWTV-------DQRPLV-----GHTSSVE 403
F ++W P +LA+ R + +W N G + D P + GH + +
Sbjct: 308 FQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKIS 367
Query: 404 DIQWSPNERNVLATCSVDKTIRIW 475
D W+ NE V+A+ + D ++++W
Sbjct: 368 DFAWNKNEPWVIASVAEDNSLQVW 391
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 526 HQSDINVISWNGK-EPFIASGGDDGFLHIWDLR 621
H+S I +SW+ K E S G+DG L IWD R
Sbjct: 216 HESAIADVSWHMKNENLFGSAGEDGRLVIWDTR 248
Score = 30.7 bits (66), Expect = 0.96
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 502 LHVTAENAHQSDINVISWN-GKEPFIASGGDDGFLHIWDLRQ 624
LHV + +H+ ++ + W+ E +AS G+D L +WDL +
Sbjct: 297 LHVMS--SHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNR 336
Score = 30.7 bits (66), Expect = 0.96
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 514 AENAHQSDINVISWNGKEPF-IASGGDDGFLHIWDLRQ 624
+ H++ I+ +WN EP+ IAS +D L +W + +
Sbjct: 358 SHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMAE 395
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 275 CPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNE-RNVLATCS 451
C G+LAT R + +W +GG T R GH V I + P+ +N+L + S
Sbjct: 110 CHASGGLLATAGADRKVLVWDV-DGGFCTHYFR---GHKGVVSSILFHPDSNKNILISGS 165
Query: 452 VDKTIRIWDTRAA-PQKACMSQLKMH 526
D T+R+WD A +K C++ ++ H
Sbjct: 166 DDATVRVWDLNAKNTEKKCLAIMEKH 191
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 523 AHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW 690
AH DIN ++ + + +G +D IW L + V T K H + SVE+
Sbjct: 497 AHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVH---VVTLKGHKRRIFSVEF 549
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/83 (27%), Positives = 38/83 (45%)
Frame = +2
Query: 293 MLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRI 472
++ TG R IWR + V L GH + +++S ++ V+ T S DKT++I
Sbjct: 513 LVCTGSEDRTASIWRLPD----LVHVVTLKGHKRRIFSVEFSTVDQCVM-TASGDKTVKI 567
Query: 473 WDTRAAPQKACMSQLKMHIKVTL 541
W A +C+ + H L
Sbjct: 568 W---AISDGSCLKTFEGHTSSVL 587
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +2
Query: 263 ALDWCPTESG--MLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNV 436
+LD C + SG ++ TG + + +W V GH + + ++ +
Sbjct: 406 SLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVG----TGHNGDILAVAFAKKSFSF 461
Query: 437 LATCSVDKTIRIW 475
+ S D+T+++W
Sbjct: 462 FVSGSGDRTLKVW 474
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 45.6 bits (103), Expect = 3e-05
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
L GHT V ++ W+P V+A+CS DKT+RIW+
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWE 49
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +2
Query: 263 ALDWCPTESGMLATGDCRRDIHIW----RPNEGGTWTVDQRPLVGHTSSVEDIQWSPNER 430
++ W + S +LAT C RD +W +P E + L GH+ V+ + W P
Sbjct: 97 SVSWNASGS-LLAT--CGRDKSVWIWEIQPEEDDEFDTIA-VLTGHSEDVKMVLWHPT-M 151
Query: 431 NVLATCSVDKTIRIW 475
+VL +CS D TI+IW
Sbjct: 152 DVLFSCSYDNTIKIW 166
Score = 35.9 bits (79), Expect = 0.025
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 508 VTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLR--QFTNSTPVGTFKHHTAPVTS 681
V+ H+S++ +SWN +A+ G D + IW+++ + + H+ V
Sbjct: 85 VSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKM 144
Query: 682 VEWH 693
V WH
Sbjct: 145 VLWH 148
Score = 34.3 bits (75), Expect = 0.078
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
L GH S V+ + W+ + ++LATC DK++ IW+
Sbjct: 88 LRGHESEVKSVSWNASG-SLLATCGRDKSVWIWE 120
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/70 (28%), Positives = 40/70 (57%)
Frame = +2
Query: 269 DWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATC 448
DW + +LAT + + +W + ++ V L GH +V +++SP+ R+++A+C
Sbjct: 199 DWNKYDDCILATSSVDKTVKVW---DVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASC 255
Query: 449 SVDKTIRIWD 478
S D ++ +WD
Sbjct: 256 SYDMSVCLWD 265
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 272 WCPTESGMLAT--GDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLAT 445
W P + A+ GDC + IW E G+ + + H + W+ + +LAT
Sbjct: 157 WNPKHGDVFASASGDCT--LRIWDVREPGSTMI----IPAHDFEILSCDWNKYDDCILAT 210
Query: 446 CSVDKTIRIWDTRA 487
SVDKT+++WD R+
Sbjct: 211 SSVDKTVKVWDVRS 224
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = +2
Query: 263 ALDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLA 442
++D+ PT T + +W + + R H V W+P +V A
Sbjct: 111 SVDYNPTRRDSFLTSSWDDTVKLWAMDRPAS----VRTFKEHAYCVYQAVWNPKHGDVFA 166
Query: 443 TCSVDKTIRIWDTR 484
+ S D T+RIWD R
Sbjct: 167 SASGDCTLRIWDVR 180
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +2
Query: 395 SVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIK 532
+V D+ WS + +VL D +++I+DT P + + H +
Sbjct: 62 AVYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAR 107
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTP----VGTFKHHTAPVTSVEW 690
H ++ + W+ +ASGG+D +HIWD R +S P + F+ HTA V ++ W
Sbjct: 217 HTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAW 275
Score = 34.3 bits (75), Expect = 0.078
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Frame = +2
Query: 266 LDWCPTESGM-LATGDCRRDIHIWRPNEGGTWTVDQRPL---VGHTSSVEDIQWSPNERN 433
L W +ESG LA+G +HIW + ++ L HT++V + W P + +
Sbjct: 224 LKW--SESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAWCPFQAS 281
Query: 434 VLATCS--VDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHGMEKSHL 574
+LAT D I+ W+T AC++ ++ +V +L+ E+ L
Sbjct: 282 LLATGGGVGDGKIKFWNTHTG---ACLNSVETGSQVCSLLWSKSERELL 327
Score = 33.1 bits (72), Expect = 0.18
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Frame = +2
Query: 263 ALDWCPTESGMLATGDCRRD--IHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNV 436
AL WCP ++ +LATG D I W + G V S V + WS +ER +
Sbjct: 272 ALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLN-----SVETGSQVCSLLWSKSEREL 326
Query: 437 LATCS-VDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHGMEKSHLLQAA 586
L++ + +W P M++L H L + + + AA
Sbjct: 327 LSSHGFTQNQLTLW---KYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAA 374
Score = 31.5 bits (68), Expect = 0.55
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 263 ALDWCPTESGMLAT-GDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVL 439
+L W +E +L++ G + + +W+ V L GHTS V + SP+ V
Sbjct: 316 SLLWSKSERELLSSHGFTQNQLTLWKYPS----MVKMAELNGHTSRVLFMAQSPDGCTV- 370
Query: 440 ATCSVDKTIRIWDTRAAPQK 499
A+ + D+T+R+W+ P K
Sbjct: 371 ASAAGDETLRLWNVFGEPPK 390
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = +2
Query: 296 LATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
LAT + + IW EG + L GHT V+ +QW P +VL +CS D TI++W
Sbjct: 133 LATCSRDKSVWIWEVLEGNEYDC-AAVLTGHTQDVKMVQWHPT-MDVLFSCSYDNTIKVW 190
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +2
Query: 272 WCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCS 451
W P+ +LAT IW+ N G + L GH + V+ + W+ + + LATCS
Sbjct: 82 WSPSGQ-LLATASFDGTTGIWK-NYGSEFECIST-LEGHENEVKSVSWNASG-SCLATCS 137
Query: 452 VDKTIRIWDTRAAPQKACMSQLKMHIK-VTLMLYH 553
DK++ IW+ + C + L H + V ++ +H
Sbjct: 138 RDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWH 172
Score = 36.7 bits (81), Expect = 0.015
Identities = 14/62 (22%), Positives = 28/62 (45%)
Frame = +1
Query: 508 VTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVE 687
++ H++++ +SWN +A+ D + IW++ + HT V V+
Sbjct: 111 ISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQ 170
Query: 688 WH 693
WH
Sbjct: 171 WH 172
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Frame = +2
Query: 362 VDQRPLVGHTSSVEDIQWSPNERN------VLATCSVDKTIRIWD 478
V+ + L GHT V + W+P + +LA+CS D T+RIW+
Sbjct: 11 VEIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWE 55
Score = 35.5 bits (78), Expect = 0.034
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERN-VLATCSVDKTIRIWDTRAAP 493
H + V +QWSP E N +LA+ S D ++IW P
Sbjct: 316 HENDVNSVQWSPGEGNRLLASASDDGMVKIWQLATKP 352
Score = 34.7 bits (76), Expect = 0.059
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +1
Query: 523 AHQSDINVISWNGKEP--FIASGGDDGFLHIWDL 618
AH++D+N + W+ E +AS DDG + IW L
Sbjct: 315 AHENDVNSVQWSPGEGNRLLASASDDGMVKIWQL 348
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYH 553
GH+S+V I ++ + + TCS D T++IW T A ++ TL YH
Sbjct: 211 GHSSTVWSISFNA-AGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYH 266
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +2
Query: 293 MLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRI 472
++ +G R + +WR NE W VD L GH ++V + + +++++ + S DK+IR+
Sbjct: 218 LIVSGADDRQVKLWRMNETKAWEVD--TLRGHMNNVSSVMFHA-KQDIIVSNSEDKSIRV 274
Query: 473 WD 478
WD
Sbjct: 275 WD 276
Score = 35.1 bits (77), Expect = 0.045
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
H +N S++ P I SG DD + +W + + T + V T + H V+SV +H
Sbjct: 203 HDRGVNWASFHPTLPLIVSGADDRQVKLWRMNE-TKAWEVDTLRGHMNNVSSVMFH 257
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 547 ISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
+S++ K P+I + G + +WD R T + F H PV V +H
Sbjct: 15 LSFHPKRPWILASLHSGVIQLWDYRM---GTLIDRFDEHEGPVRGVHFH 60
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKA 502
L GH V + P E +++ + S+D+T+R+WD A +K+
Sbjct: 131 LTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALKKKS 171
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMH 526
L+GH + +Q+ +E + + S D+TIRIW+ ++ + C+S L H
Sbjct: 89 LLGHLDYIRTVQFH-HENPWIVSASDDQTIRIWNWQS---RTCISVLTGH 134
Score = 28.7 bits (61), Expect = 3.9
Identities = 8/32 (25%), Positives = 18/32 (56%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLR 621
H+ + + ++ +P SGGDD + +W+ +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYK 81
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +2
Query: 293 MLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRI 472
++ +G R + +WR NE W VD L GH ++V + + +++++ + S DK+IR+
Sbjct: 218 LIVSGADDRQVKLWRMNETKAWEVD--TLRGHMNNVSSVMFHA-KQDIIVSNSEDKSIRV 274
Query: 473 WD 478
WD
Sbjct: 275 WD 276
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
H +N +++ P I SG DD + +W + + T + V T + H V+SV +H
Sbjct: 203 HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE-TKAWEVDTLRGHMNNVSSVMFH 257
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 547 ISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
+S++ K P+I + G + +WD R T + F H PV V +H
Sbjct: 15 LSFHPKRPWILASLHSGVIQLWDYRM---GTLIDRFDEHEGPVRGVHFH 60
Score = 31.1 bits (67), Expect = 0.73
Identities = 13/56 (23%), Positives = 28/56 (50%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
H+ + + ++ +P SGGDD + +W+ + N + T H + +V++H
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWN---YKNHRCLFTLLGHLDYIRTVQFH 102
Score = 31.1 bits (67), Expect = 0.73
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQK 499
L GH V + P E +++ + S+D+T+R+WD A +K
Sbjct: 131 LTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKK 170
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMH 526
L+GH + +Q+ +E + + S D+TIRIW+ ++ + C+S L H
Sbjct: 89 LLGHLDYIRTVQFH-HEYPWIVSASDDQTIRIWNWQS---RTCVSVLTGH 134
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 272 WCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWS-PNERNVLATC 448
W P + G+L + +HI+ + GG + + H +V D+ +S PN++ + TC
Sbjct: 427 WSP-DGGLLGVAYSKHIVHIYSYH-GGEDLRNHLEIDAHAGNVNDLAFSQPNQQLCVVTC 484
Query: 449 SVDKTIRIWD 478
DKTI++WD
Sbjct: 485 GEDKTIKVWD 494
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 272 WCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWS-PNERNVLATC 448
W P + G+L + +HI+ + GG + + H +V D+ +S PN++ + TC
Sbjct: 427 WSP-DGGLLGVAYSKHIVHIYSYH-GGEDLRNHLEIDAHAGNVNDLAFSQPNQQLCVVTC 484
Query: 449 SVDKTIRIWD 478
DKTI++WD
Sbjct: 485 GEDKTIKVWD 494
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 520 NAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
N D+ + WNG+ +A+G DG IW L N + T H P+ S++W+
Sbjct: 321 NEKSKDVTTLDWNGEGTLLATGSCDGQARIWTL----NGELISTLSKHKGPIFSLKWN 374
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW 690
HQ ++N + W+ +AS DD IW+++Q ST V + HT + ++ W
Sbjct: 447 HQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQ---STFVHDLREHTKEIYTIRW 498
Score = 39.1 bits (87), Expect = 0.003
Identities = 29/92 (31%), Positives = 42/92 (45%)
Frame = +2
Query: 266 LDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLAT 445
LDW E +LATG C IW N T+ + H + ++W+ + + L T
Sbjct: 330 LDW-NGEGTLLATGSCDGQARIWTLNGELISTLSK-----HKGPIFSLKWN-KKGDYLLT 382
Query: 446 CSVDKTIRIWDTRAAPQKACMSQLKMHIKVTL 541
SVD+T +WD +A K Q + H TL
Sbjct: 383 GSVDRTAVVWDVKAEEWK---QQFEFHSGPTL 411
Score = 36.3 bits (80), Expect = 0.019
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +2
Query: 365 DQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLM 544
D R L GHTS V WSP+ ++LA+ S D T RIW KA + ++ L+
Sbjct: 257 DVRILEGHTSEVCACAWSPS-ASLLASGSGDATARIWSIPEGSFKAVHTGRNIN---ALI 312
Query: 545 LYHGMEKSH 571
L H KS+
Sbjct: 313 LKHAKGKSN 321
Score = 35.5 bits (78), Expect = 0.034
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 371 RPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIK 532
+ GH V ++W P ++LA+CS D T +IW+ + Q + L+ H K
Sbjct: 442 KTFTGHQGEVNCVKWDPTG-SLLASCSDDSTAKIWNIK---QSTFVHDLREHTK 491
Score = 34.7 bits (76), Expect = 0.059
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Frame = +2
Query: 272 WCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSP--------NE 427
W PT S +LA+ IW + T+ D R HT + I+WSP N+
Sbjct: 456 WDPTGS-LLASCSDDSTAKIWNIKQS-TFVHDLRE---HTKEIYTIRWSPTGPGTNNPNK 510
Query: 428 RNVLATCSVDKTIRIWD 478
+ LA+ S D T+++WD
Sbjct: 511 QLTLASASFDSTVKLWD 527
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = +1
Query: 490 TTKGLHVTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTA 669
T G ++ + H+ I + WN K ++ +G D +WD++ F+ H+
Sbjct: 352 TLNGELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKA---EEWKQQFEFHSG 408
Query: 670 PVTSVEW 690
P V+W
Sbjct: 409 PTLDVDW 415
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +1
Query: 520 NAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 624
N H+ + ++++ +IASG D +HIW +++
Sbjct: 538 NGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKE 572
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +2
Query: 296 LATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
+A+G + IHIW EG + G+ + ++ W+ E N +A C D ++ +
Sbjct: 556 IASGSLDKSIHIWSIKEGKI----VKTYTGN-GGIFEVCWN-KEGNKIAACFADNSVCVL 609
Query: 476 DTR 484
D R
Sbjct: 610 DFR 612
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Frame = +2
Query: 296 LATGDCRRDIHIWRPNEGGTWTVDQ--RPLVGHTSSVEDIQWSPNERNVLAT--CSVDKT 463
LA+G +HIW + + + Q L HTS+V+ + W P + N+LAT D+T
Sbjct: 281 LASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRT 340
Query: 464 IRIWDTRAAPQKACMSQLKMHIKVTLMLYHGMEKSHL 574
I+ W+T AC++ + +V +L+ E+ L
Sbjct: 341 IKFWNTHTG---ACLNSVDTGSQVCSLLWSKNERELL 374
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 508 VTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLR-QFTNSTP--VGTFKHHTAPVT 678
V H ++ + W+G +ASGG+D +HIWD +NST + + HT+ V
Sbjct: 259 VETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVK 318
Query: 679 SVEW 690
++ W
Sbjct: 319 ALAW 322
Score = 35.5 bits (78), Expect = 0.034
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +1
Query: 511 TAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW 690
T + HQS + ++WN + +GG DG + D+R S V T++ HT V ++W
Sbjct: 219 TLKGGHQSRVGSLAWNNH--ILTTGGMDGLIINNDVR--IRSPIVETYRGHTQEVCGLKW 274
Score = 35.1 bits (77), Expect = 0.045
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Frame = +2
Query: 263 ALDWCPTESGMLAT--GDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNV 436
AL WCP ++ +LAT G R I W + G V S V + WS NER +
Sbjct: 319 ALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLN-----SVDTGSQVCSLLWSKNEREL 373
Query: 437 LATCS-VDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHGMEKSHLLQAA 586
L++ + +W P M++L H L + + + AA
Sbjct: 374 LSSHGFTQNQLTLW---KYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAA 421
Score = 32.3 bits (70), Expect = 0.31
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 263 ALDWCPTESGMLAT-GDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVL 439
+L W E +L++ G + + +W+ V L GHTS V + SP+ V
Sbjct: 363 SLLWSKNERELLSSHGFTQNQLTLWKYPS----MVKMAELTGHTSRVLYMAQSPDGCTV- 417
Query: 440 ATCSVDKTIRIWDTRAAPQKA 502
A+ + D+T+R W+ P+ A
Sbjct: 418 ASAAGDETLRFWNVFGVPETA 438
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Frame = +2
Query: 296 LATGDCRRDIHIWRPNEGGTWTVDQ--RPLVGHTSSVEDIQWSPNERNVLAT--CSVDKT 463
LA+G +HIW + + + Q L HTS+V+ + W P + N+LAT D+T
Sbjct: 271 LASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRT 330
Query: 464 IRIWDTRAAPQKACMSQLKMHIKVTLMLYHGMEKSHL 574
I+ W+T AC++ + +V +L+ E+ L
Sbjct: 331 IKFWNTHTG---ACLNSVDTGSQVCSLLWSKNERELL 364
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 508 VTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLR-QFTNSTP--VGTFKHHTAPVT 678
V H ++ + W+G +ASGG+D +HIWD +NST + + HT+ V
Sbjct: 249 VETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVK 308
Query: 679 SVEW 690
++ W
Sbjct: 309 ALAW 312
Score = 35.5 bits (78), Expect = 0.034
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +1
Query: 511 TAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW 690
T + HQS + ++WN + +GG DG + D+R S V T++ HT V ++W
Sbjct: 209 TLKGGHQSRVGSLAWNNH--ILTTGGMDGLIINNDVR--IRSPIVETYRGHTQEVCGLKW 264
Score = 35.1 bits (77), Expect = 0.045
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Frame = +2
Query: 263 ALDWCPTESGMLAT--GDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNV 436
AL WCP ++ +LAT G R I W + G V S V + WS NER +
Sbjct: 309 ALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLN-----SVDTGSQVCSLLWSKNEREL 363
Query: 437 LATCS-VDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHGMEKSHLLQAA 586
L++ + +W P M++L H L + + + AA
Sbjct: 364 LSSHGFTQNQLTLW---KYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAA 411
Score = 32.3 bits (70), Expect = 0.31
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 263 ALDWCPTESGMLAT-GDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVL 439
+L W E +L++ G + + +W+ V L GHTS V + SP+ V
Sbjct: 353 SLLWSKNERELLSSHGFTQNQLTLWKYPS----MVKMAELTGHTSRVLYMAQSPDGCTV- 407
Query: 440 ATCSVDKTIRIWDTRAAPQKA 502
A+ + D+T+R W+ P+ A
Sbjct: 408 ASAAGDETLRFWNVFGVPETA 428
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +2
Query: 254 KGFALDWCPTESGMLATGDCRRDIHIWRPNEGGTWTV--DQRPLVGHTSSVEDIQWSPNE 427
+G+ L W + G L +G + I +W + T V GH S +ED+ W
Sbjct: 171 EGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKN 230
Query: 428 RNVLATCSVDKTIRIWDTRAAPQKACMSQLKMH 526
N+ + D + IWD R Q+K+H
Sbjct: 231 ENIFGSAGDDCQLVIWDLRT---NQMQHQVKVH 260
Score = 34.3 bits (75), Expect = 0.078
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
H V ++W PN VLA+ D+ + +WD
Sbjct: 304 HEGEVFQVEWDPNHETVLASSGEDRRLMVWD 334
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 526 HQSDINVISWNGK-EPFIASGGDDGFLHIWDLR 621
HQS I ++W+ K E S GDD L IWDLR
Sbjct: 217 HQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLR 249
Score = 31.9 bits (69), Expect = 0.41
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Frame = +2
Query: 260 FALDWCPTESGMLATGDCRRDIHIWRPNEGGTWTV-------DQRPLV-----GHTSSVE 403
F ++W P +LA+ R + +W N G + D P + GH + +
Sbjct: 309 FQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKAKIS 368
Query: 404 DIQWSPNERNVLATCSVDKTIRIW 475
D W+ +E V+++ + D ++++W
Sbjct: 369 DFAWNKDEPWVISSVAEDNSLQVW 392
Score = 30.7 bits (66), Expect = 0.96
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 493 TKGLHVTAENAHQSDINVISWN-GKEPFIASGGDDGFLHIWDLRQ 624
T LHV ++ H+ ++ + W+ E +AS G+D L +WD+ +
Sbjct: 295 TAPLHVLSK--HEGEVFQVEWDPNHETVLASSGEDRRLMVWDINR 337
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 514 AENAHQSDINVISWNGKEPF-IASGGDDGFLHIWDLRQ 624
+ H++ I+ +WN EP+ I+S +D L +W + +
Sbjct: 359 SHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAE 396
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +2
Query: 284 ESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKT 463
+S +A+G ++IW T L GH+ +V + W+P +LA+ S D+T
Sbjct: 454 DSSFIASGSEDSQVYIWNLKN----TKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQT 509
Query: 464 IRIW 475
IRIW
Sbjct: 510 IRIW 513
Score = 34.3 bits (75), Expect = 0.078
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 571 FIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
FIASG +D ++IW+L+ N+ P+ H+ V V W+
Sbjct: 457 FIASGSEDSQVYIWNLK---NTKPLEVLSGHSMTVNCVSWN 494
Score = 34.3 bits (75), Expect = 0.078
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 493 TKGLHVTAENAHQSDINVISWNGKEP-FIASGGDDGFLHIW 612
TK L V + H +N +SWN K P +AS DD + IW
Sbjct: 475 TKPLEVLS--GHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
L H + V + WSP++ +L TC + +++WD
Sbjct: 265 LESHQNPVSFVSWSPDDTKLL-TCGNAEVLKLWD 297
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/56 (21%), Positives = 25/56 (44%)
Frame = +1
Query: 523 AHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW 690
AH++++ + ++ ++A+ D IW + T + H PV+ V W
Sbjct: 222 AHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSW 277
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTP----VGTFKHHTAPVTSVEW 690
H ++ + W+ +ASGG+D +HIWD R +S P + F+ HTA V ++ W
Sbjct: 235 HTEEVCGLKWSESGKKLASGGNDNVVHIWD-RSLASSNPTRQWLHRFEEHTAAVRALAW 292
Score = 35.1 bits (77), Expect = 0.045
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 505 HV-TAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTS 681
HV T H+S + ++WN + +GG DG + D+R S+ +GT+ HT V
Sbjct: 186 HVRTLRGGHESRVGSLAWNNH--ILTTGGMDGKIVNNDVR--IRSSIIGTYVGHTEEVCG 241
Query: 682 VEW 690
++W
Sbjct: 242 LKW 244
Score = 34.7 bits (76), Expect = 0.059
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Frame = +2
Query: 266 LDWCPTESGM-LATGDCRRDIHIWRPNEGGTWTVDQ--RPLVGHTSSVEDIQWSPNERNV 436
L W +ESG LA+G +HIW + + Q HT++V + W P + ++
Sbjct: 242 LKW--SESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASL 299
Query: 437 LATCS--VDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHGMEKSHL 574
LAT D I W+T AC++ ++ +V +L+ E+ L
Sbjct: 300 LATGGGVGDGKINFWNTHTG---ACLNSVETGSQVCSLLWSKSERELL 344
Score = 33.5 bits (73), Expect = 0.14
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Frame = +2
Query: 263 ALDWCPTESGMLATGDCRRD--IHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNV 436
AL WCP ++ +LATG D I+ W + G V S V + WS +ER +
Sbjct: 289 ALAWCPFQASLLATGGGVGDGKINFWNTHTGACLN-----SVETGSQVCSLLWSKSEREL 343
Query: 437 LATCS-VDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHGMEKSHLLQAA 586
L+ + +W P M++L H L + + + AA
Sbjct: 344 LSAHGFTQNQLTLW---KYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAA 391
Score = 31.5 bits (68), Expect = 0.55
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +2
Query: 263 ALDWCPTESGML-ATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVL 439
+L W +E +L A G + + +W+ V L GHTS V + SP+ V
Sbjct: 333 SLLWSKSERELLSAHGFTQNQLTLWKYPS----MVKMAELNGHTSRVLFMAQSPDGCTV- 387
Query: 440 ATCSVDKTIRIWDTRAAPQK 499
A+ + D+T+R+W+ P K
Sbjct: 388 ASAAGDETLRLWNVFGEPPK 407
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 380 VGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAA 490
VGHT V ++WS + + LA+ D + IWD A
Sbjct: 233 VGHTEEVCGLKWSESGKK-LASGGNDNVVHIWDRSLA 268
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 538 INVISWNGKEP-FIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
+N + G+ IA+GG D L +WD R+ S PV F H++ +++ +WH
Sbjct: 315 LNTVDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWH 367
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +2
Query: 287 SGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTI 466
S ++A G + +W P + GT + H+S + +W + L + S D I
Sbjct: 325 SALIAAGGSDPILRVWDPRKPGT-SAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKI 383
Query: 467 RIWDTRAA 490
+WD R A
Sbjct: 384 MLWDLRTA 391
Score = 31.1 bits (67), Expect = 0.73
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
LVGHT V + W E +V+ + S D ++R WD
Sbjct: 268 LVGHTQCVSSVVWP--EHDVIYSSSWDHSVRRWD 299
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 538 INVISWNGKEP-FIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
+N + G+ IA+GG D L +WD R+ S PV F H++ +++ +WH
Sbjct: 315 LNTVDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWH 367
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +2
Query: 287 SGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTI 466
S ++A G + +W P + GT + H+S + +W + L + S D I
Sbjct: 325 SALIAAGGSDPILRVWDPRKPGT-SAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKI 383
Query: 467 RIWDTRAA 490
+WD R A
Sbjct: 384 MLWDLRTA 391
Score = 31.1 bits (67), Expect = 0.73
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
LVGHT V + W E +V+ + S D ++R WD
Sbjct: 268 LVGHTQCVSSVVWP--EHDVIYSSSWDHSVRRWD 299
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +1
Query: 505 HVTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSV 684
HV+ H+S+I + W+ +ASGG+D L +W+ ++ PV F H A V ++
Sbjct: 284 HVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQH---STQPVLRFCEHAAAVKAI 340
Query: 685 EW 690
W
Sbjct: 341 AW 342
Score = 32.7 bits (71), Expect = 0.24
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +2
Query: 266 LDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLAT 445
L W +++ LA+G + +W N+ T V + H ++V+ I WSP+ +LA+
Sbjct: 298 LKWS-SDNRELASGGNDNKLFVW--NQHSTQPVLR--FCEHAAAVKAIAWSPHHFGLLAS 352
Query: 446 --CSVDKTIRIWDTRAAPQKACM 508
+ D+ IR W+T C+
Sbjct: 353 GGGTADRCIRFWNTTTNTHLNCV 375
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = +2
Query: 296 LATGDCRRDIHIWRPNEGGTWTVDQRPLVG-HTSSVEDIQWSPN---ERNVLATCSVDKT 463
LA+G C + +W+ + G +W +D P + HT V D+ W+PN ++ +A+ S D
Sbjct: 179 LASGGCDSTVKVWKFSNG-SWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGK 237
Query: 464 IRIW 475
+ IW
Sbjct: 238 VIIW 241
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = +2
Query: 278 PTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSV- 454
P +LA+ I +W+ WT H SV I W+P+E + C
Sbjct: 67 PKFGSLLASCSYDGQIILWKEGNQNQWT-QAHVFTDHKVSVNSIAWAPHELGLSLACGAS 125
Query: 455 DKTIRIWDTRA 487
D I ++ RA
Sbjct: 126 DGNISVFSARA 136
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +2
Query: 296 LATGDCRRDIHIWRPNEGGTWTVDQRP-LVGHTSSVEDIQWSPN---ERNVLATCSVDKT 463
LA+G C + +W+ G+W +D P L HT V D+ W+PN ++ +A+ S D
Sbjct: 179 LASGGCDNTVKVWKL-ANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGK 237
Query: 464 IRIW 475
+ IW
Sbjct: 238 VIIW 241
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 278 PTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATC-SV 454
P +LA+ + +W+ WT D H SSV I W+P++ + C S
Sbjct: 67 PKYGSILASCSYDGQVILWKEGNQNQWTQDH-VFTDHKSSVNSIAWAPHDIGLSLACGSS 125
Query: 455 DKTIRIWDTRA 487
D I ++ RA
Sbjct: 126 DGNISVFTARA 136
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +1
Query: 505 HVTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSV 684
HV+ H+S++ + W+ +ASGG+D L +W+ ++ PV + HTA V ++
Sbjct: 327 HVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQH---STQPVLKYSEHTAAVKAI 383
Query: 685 EW 690
W
Sbjct: 384 AW 385
Score = 32.3 bits (70), Expect = 0.31
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLAT--CSVDKTIRIWDT 481
HT++V+ I WSP+ +LA+ + D+ IR W+T
Sbjct: 376 HTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNT 409
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +2
Query: 284 ESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKT 463
+ +A+G ++IW + G L GH +V + WSP ++LA+ S D T
Sbjct: 500 KQAFIASGSEDSQVYIWHRSTGKLIV----ELPGHAGAVNCVSWSPTNLHMLASASDDGT 555
Query: 464 IRIW 475
IRIW
Sbjct: 556 IRIW 559
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +2
Query: 329 IWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
IW + G ++ + LVGH V I WSP++R VL TC ++ IR WD
Sbjct: 300 IWEISADGHISL-KHTLVGHHKPVIAILWSPDDRQVL-TCGAEEVIRRWD 347
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 526 HQSDINVISWNGKE-PFIASGGDDGFLHIWDL 618
H +N +SW+ +AS DDG + IW L
Sbjct: 530 HAGAVNCVSWSPTNLHMLASASDDGTIRIWGL 561
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTP----VGTFKHHTAPVTSVEW 690
H ++ + W+ +ASGG+ +HIWD R +S P + F+ HTA V ++ W
Sbjct: 248 HTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAW 306
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +1
Query: 511 TAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW 690
T H+S + ++WN + +GG DG + D+R S+ VGT+ HT V ++W
Sbjct: 202 TLIGGHESRVGSLAWNNH--ILTTGGMDGKIVNNDVR--IRSSIVGTYLGHTEEVCGLKW 257
Score = 33.5 bits (73), Expect = 0.14
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Frame = +2
Query: 266 LDWCPTESGM-LATGDCRRDIHIWRPNEGGTWTVDQRPL---VGHTSSVEDIQWSPNERN 433
L W +ESG LA+G +HIW + ++ L HT++V + W P +
Sbjct: 255 LKW--SESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAWCPFQAT 312
Query: 434 VLATCS--VDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHGMEKSHL 574
+LAT D I+ W+T AC++ ++ +V +L+ E+ L
Sbjct: 313 LLATGGGVGDGKIKFWNTHTG---ACLNSVETGSQVCSLLWSQRERELL 358
Score = 31.9 bits (69), Expect = 0.41
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +2
Query: 263 ALDWCPTESGMLATGDCRRD--IHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNV 436
AL WCP ++ +LATG D I W + G V S V + WS ER +
Sbjct: 303 ALAWCPFQATLLATGGGVGDGKIKFWNTHTGACLN-----SVETGSQVCSLLWSQREREL 357
Query: 437 LATCS-VDKTIRIWDTRAAPQKACMSQLKMHIKVTLML 547
L++ + +W P + M++L H L +
Sbjct: 358 LSSHGFTQNQLTLW---KYPSMSKMAELNGHTSRVLFM 392
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +1
Query: 517 ENAHQSDINVISWNGKE-PFIASGGDDGFLHIWDLRQFTNS---TPVGTFKHHTAPVTSV 684
E AH +D++ + WN + I +G D + ++D R T++ +PV F+ H A V V
Sbjct: 322 EKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCV 381
Query: 685 EW 690
+W
Sbjct: 382 QW 383
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +2
Query: 266 LDWCPTESGMLATGDCRRDIHIW-RPN--EGGTWTVDQRPLVGHTSSVEDIQWSPNERNV 436
+DW P ++ ++ TG + ++ R N G + + GH ++V +QWSP++ +V
Sbjct: 332 VDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYK-FEGHRAAVLCVQWSPDKSSV 390
Query: 437 LATCSVDKTIRIWDTRAAPQKA 502
+ + D + IWD +K+
Sbjct: 391 FGSSAEDGLLNIWDCDRVGKKS 412
Score = 35.5 bits (78), Expect = 0.034
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLATCSVDKTIRIWDTR 484
H + + + W+P++ N++ T S D T+R++D R
Sbjct: 325 HDADLHCVDWNPHDNNLILTGSADNTVRVFDRR 357
Score = 30.7 bits (66), Expect = 0.96
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMH 526
GH +VED+ + P+ + D + +WD R A M K H
Sbjct: 279 GHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPA-MKVEKAH 325
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 520 NAHQSDINVISW--NGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
N H+ + +++ + + F S GDD L +WD R T S + K H A + V+W+
Sbjct: 278 NGHKDTVEDVAFCPSSAQEF-CSVGDDSCLMLWDARTGT-SPAMKVEKAHDADLHCVDWN 335
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 7/75 (9%)
Frame = +1
Query: 460 DHKNMGY*SSTTKGLHVTAENAHQSDINVISWN-GKEPFIASGGDDGFLHIWDL------ 618
D +N+ +S G V H++ + + W+ K S +DG L+IWD
Sbjct: 355 DRRNL---TSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGKK 411
Query: 619 RQFTNSTPVGTFKHH 663
+ TP G F H
Sbjct: 412 SERATKTPDGLFFQH 426
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHGME 562
HT SV + W+ RN+LA+ S DK +++WD K M ++ ++ E
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPE 322
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 517 ENAHQSDINVISWNGK-EPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
E +H + ++WN + +AS D + +WD+ T + + T +HHT V +V W+
Sbjct: 261 EGSHTESVLGLAWNKEFRNILASASADKKVKVWDVA--TGTCKI-TMEHHTKEVQAVAWN 317
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +2
Query: 398 VEDIQWSPNERNVLATCSVDKTIRIWD 478
V I ++ + N+LAT S+DK++++WD
Sbjct: 407 VSSISYNISTPNLLATGSMDKSVKLWD 433
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +2
Query: 287 SGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTI 466
S LAT + I IW ++ G + R + GH + V I + P + +L +C + I
Sbjct: 562 STQLATSSFDKTIKIWDASDPGYFL---RTISGHAAPVMSIDFHPKKTELLCSCDSNNDI 618
Query: 467 RIWDTRAAPQKA 502
R WD A+ +A
Sbjct: 619 RFWDINASCVRA 630
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
GH+S+V + WSPN ++A+ S D +++W
Sbjct: 673 GHSSNVHSVCWSPN-GELVASVSED-AVKLW 701
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 278 PTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVD 457
P+ +L G + I +W E TV GH + + SP+ V+A+ S D
Sbjct: 726 PSYPDLLVIGGYQA-IELWNTMENKCMTV-----AGHECVISALAQSPST-GVVASASHD 778
Query: 458 KTIRIW 475
K+++IW
Sbjct: 779 KSVKIW 784
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +2
Query: 287 SGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTI 466
S LAT + I IW ++ G + R + GH + V I + P + +L +C + I
Sbjct: 564 STQLATSSFDKTIKIWDASDPGYFL---RTISGHAAPVMSIDFHPKKTELLCSCDSNNDI 620
Query: 467 RIWDTRAAPQKA 502
R WD A+ +A
Sbjct: 621 RFWDINASCVRA 632
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
GH+S+V + WSPN ++A+ S D +++W
Sbjct: 675 GHSSNVHSVCWSPN-GELVASVSED-AVKLW 703
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 278 PTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVD 457
P+ +L G + I +W E TV GH + + SP+ V+A+ S D
Sbjct: 728 PSYPDLLVIGGYQA-IELWNTMENKCMTV-----AGHECVISALAQSPST-GVVASASHD 780
Query: 458 KTIRIW 475
K+++IW
Sbjct: 781 KSVKIW 786
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +2
Query: 287 SGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTI 466
S LAT + I IW ++ G + R + GH + V I + P + +L +C + I
Sbjct: 564 STQLATSSFDKTIKIWDASDPGYFL---RTISGHAAPVMSIDFHPKKTELLCSCDSNNDI 620
Query: 467 RIWDTRAAPQKA 502
R WD A+ +A
Sbjct: 621 RFWDINASCVRA 632
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
GH+S+V + WSPN ++A+ S D +++W
Sbjct: 675 GHSSNVHSVCWSPN-GELVASVSED-AVKLW 703
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 278 PTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVD 457
P+ +L G + I +W E TV GH + + SP+ V+A+ S D
Sbjct: 728 PSYPDLLVIGGYQA-IELWNTMENKCMTV-----AGHECVISALAQSPST-GVVASASHD 780
Query: 458 KTIRIW 475
K+++IW
Sbjct: 781 KSVKIW 786
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +2
Query: 287 SGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTI 466
S LAT + I IW ++ G + R + GH + V I + P + +L +C + I
Sbjct: 564 STQLATSSFDKTIKIWDASDPGYFL---RTISGHAAPVMSIDFHPKKTELLCSCDSNNDI 620
Query: 467 RIWDTRAAPQKA 502
R WD A+ +A
Sbjct: 621 RFWDINASCVRA 632
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
GH+S+V + WSPN ++A+ S D +++W
Sbjct: 675 GHSSNVHSVCWSPN-GELVASVSED-AVKLW 703
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 278 PTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVD 457
P+ +L G + I +W E TV GH + + SP+ V+A+ S D
Sbjct: 728 PSYPDLLVIGGYQA-IELWNTMENKCMTV-----AGHECVISALAQSPST-GVVASASHD 780
Query: 458 KTIRIW 475
K+++IW
Sbjct: 781 KSVKIW 786
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +2
Query: 287 SGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTI 466
S LAT + I IW ++ G + R + GH + V I + P + +L +C + I
Sbjct: 564 STQLATSSFDKTIKIWDASDPGYFL---RTISGHAAPVMSIDFHPKKTELLCSCDSNNDI 620
Query: 467 RIWDTRAAPQKA 502
R WD A+ +A
Sbjct: 621 RFWDINASCVRA 632
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
GH+S+V + WSPN ++A+ S D +++W
Sbjct: 675 GHSSNVHSVCWSPN-GELVASVSED-AVKLW 703
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 278 PTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVD 457
P+ +L G + I +W E TV GH + + SP+ V+A+ S D
Sbjct: 728 PSYPDLLVIGGYQA-IELWNTMENKCMTV-----AGHECVISALAQSPST-GVVASASHD 780
Query: 458 KTIRIW 475
K+++IW
Sbjct: 781 KSVKIW 786
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 40.7 bits (91), Expect = 9e-04
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHGME 562
HT SV + W+ RN+LA+ S DK +++WD K M ++ ++ E
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPE 290
Score = 32.3 bits (70), Expect = 0.31
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
GH + + ++ + N+LAT S D+T+++WD
Sbjct: 367 GHDEAATSVSYNISAPNLLATGSKDRTVKLWD 398
Score = 31.5 bits (68), Expect = 0.55
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 517 ENAHQSDINVISWNGK-EPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
+ +H + ++WN + +AS D + +WD+ T + + T +HHT V +V W+
Sbjct: 229 QGSHTRSVLGLAWNKEFRNILASASADKKVKVWDVA--TGTCKI-TMEHHTKEVQAVAWN 285
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 40.7 bits (91), Expect = 9e-04
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +2
Query: 302 TGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
+G + +IW+ N+ VD L GH V + WSP+E +AT S D T+R+W+
Sbjct: 355 SGSSDGNAYIWQVNKP---QVDPIILKGHDFEVTAVDWSPSEIGKVATASDDFTVRLWN 410
Score = 34.3 bits (75), Expect = 0.078
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 260 FALDWCPTESGML-ATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNV 436
F + W +S +L A+GD + I +W E V L+GHT +V+ + P ++
Sbjct: 132 FDISWIKGDSCLLTASGD--QTIKVWDVEENKCTGV----LIGHTGTVKSMCSHPTNSDL 185
Query: 437 LATCSVDKTIRIWDTR 484
L + S D +WD R
Sbjct: 186 LVSGSRDGCFALWDLR 201
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 571 FIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW 690
++ SG DG +IW + + P+ K H VT+V+W
Sbjct: 352 YVLSGSSDGNAYIWQVNK-PQVDPI-ILKGHDFEVTAVDW 389
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/71 (26%), Positives = 40/71 (56%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHG 556
L GH ++ D+ WS ++ +L + S+DKT+R+WD K C+ + VT + +
Sbjct: 502 LKGHLDAILDLSWSKSQ--LLLSSSMDKTVRLWDIET---KTCLKLFAHNDYVTCIQFSP 556
Query: 557 MEKSHLLQAAV 589
+++++ L ++
Sbjct: 557 VDENYFLSGSL 567
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 502 LHVTAE-NAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 624
LH+ E AH+ + I ++ ++ASGG D +H+W++++
Sbjct: 394 LHMCQEIQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQE 435
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
L H V IQ+SP + N + S+D IRIW
Sbjct: 542 LFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIW 574
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 40.7 bits (91), Expect = 9e-04
Identities = 24/94 (25%), Positives = 41/94 (43%)
Frame = +2
Query: 284 ESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKT 463
+ +L +G C R I +W + + + L GH ++ + N ++L + S D+T
Sbjct: 291 DGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSLF---NVSDLLLSGSADRT 347
Query: 464 IRIWDTRAAPQKACMSQLKMHIKVTLMLYHGMEK 565
+RIW +C+ L H K L EK
Sbjct: 348 VRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREK 381
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/70 (27%), Positives = 38/70 (54%)
Frame = +2
Query: 380 VGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHGM 559
VGH V D+ WS ++ L + S+DKT+R+WD + K C+ VT + ++ +
Sbjct: 465 VGHLDDVLDLSWSKSQH--LLSSSMDKTVRLWDLSS---KTCLKVFSHSDYVTCIQFNPV 519
Query: 560 EKSHLLQAAV 589
+ ++ + ++
Sbjct: 520 DDNYFISGSL 529
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +2
Query: 368 QRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLML 547
Q GHT + D+ WS E+ L + SVD+T+R+W R C+ VT +
Sbjct: 356 QHEFRGHTGEILDLSWS--EKGFLLSSSVDETVRLW--RVGSSDECIRVFSHKSFVTCVA 411
Query: 548 YHGMEKSHLLQAAV 589
++ ++ ++ + ++
Sbjct: 412 FNPVDDNYFISGSI 425
Score = 32.3 bits (70), Expect = 0.31
Identities = 19/74 (25%), Positives = 31/74 (41%)
Frame = +2
Query: 257 GFALDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNV 436
G LD +E G L + + +WR + H S V + ++P + N
Sbjct: 364 GEILDLSWSEKGFLLSSSVDETVRLWRVGSSDECI----RVFSHKSFVTCVAFNPVDDNY 419
Query: 437 LATCSVDKTIRIWD 478
+ S+D +RIWD
Sbjct: 420 FISGSIDGKVRIWD 433
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 356 WTVDQ-RPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTR 484
W++D+ +PL + D+ W PN N +AT S DKT+R+WD +
Sbjct: 487 WSMDRIQPLRIMAGHLSDVDWHPN-CNYIATGSSDKTVRLWDVQ 529
Score = 31.1 bits (67), Expect = 0.73
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKAC 505
L+GH+ V +SP VL++ S D TIR+W T+ C
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSS-SADTTIRLWSTKLNANLVC 455
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
GH V D Q+SP + A+CS D+T RIW
Sbjct: 458 GHNYPVWDAQFSPFG-HYFASCSHDRTARIW 487
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 508 VTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNST 639
+T H S + +S++G+ +ASG D + +WD+ T T
Sbjct: 576 ITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLT 619
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPV 645
H+S + ++ + ++ASG +DG + +WDL TP+
Sbjct: 540 HRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPL 579
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +1
Query: 517 ENAHQSDINVISWNGKEP-FIASGGDDGFLHIWDLRQFTNS---TPVGTFKHHTAPVTSV 684
E AH +D++ + WN + I +G D + ++D R+ T + +P+ F+ H A V V
Sbjct: 333 EKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCV 392
Query: 685 EW 690
+W
Sbjct: 393 QW 394
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +2
Query: 266 LDWCPTESGMLATGDCRRDIHIW---RPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNV 436
+DW P + ++ TG + ++ + G + + GH ++V +QWSP++ +V
Sbjct: 343 VDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYK-FEGHKAAVLCVQWSPDKSSV 401
Query: 437 LATCSVDKTIRIWDTRAAPQKA 502
+ + D + IWD +K+
Sbjct: 402 FGSSAEDGLLNIWDYDRVSKKS 423
Score = 34.3 bits (75), Expect = 0.078
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLATCSVDKTIRIWDTR 484
H + + + W+P++ N++ T S D T+R++D R
Sbjct: 336 HDADLHCVDWNPHDDNLILTGSADNTVRLFDRR 368
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTR 484
GH +VED+ +SP + D + +WD R
Sbjct: 290 GHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDAR 323
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 580 SGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
S GDD L +WD R TN K H A + V+W+
Sbjct: 310 SVGDDSCLILWDARTGTNPV-TKVEKAHDADLHCVDWN 346
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Frame = +1
Query: 526 HQSDINVISWN-GKEPFIASGGDDGFLHIWDLRQFTN------STPVGTFKHH 663
H++ + + W+ K S +DG L+IWD + + +P G F H
Sbjct: 385 HKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSKKSDRAAKSPAGLFFQH 437
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 526 HQSDINVISWNGKEP-FIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW 690
H + I W+ +AS G DG +++W++ + V F HH APV V+W
Sbjct: 159 HTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWS-NDKKKVRAFLHHNAPVKDVKW 213
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQK 499
L GHT +V I WS + ++LA+ +D + +W+ + +K
Sbjct: 156 LTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKK 196
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHGME 562
GHT V DI WS + N L + S+DKT+R+W + C+ + VT + ++ +
Sbjct: 326 GHTGEVLDISWSKD--NYLLSASMDKTVRLWKVGS---NDCLGVFAHNSYVTSVQFNPVN 380
Query: 563 KSHLLQAAV---MMVFYISG 613
+++ + ++ + ++ ISG
Sbjct: 381 ENYFMSGSIDGKVRIWNISG 400
Score = 31.1 bits (67), Expect = 0.73
Identities = 17/74 (22%), Positives = 32/74 (43%)
Frame = +2
Query: 257 GFALDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNV 436
G LD ++ L + + + +W+ D + H S V +Q++P N
Sbjct: 329 GEVLDISWSKDNYLLSASMDKTVRLWKVGSN-----DCLGVFAHNSYVTSVQFNPVNENY 383
Query: 437 LATCSVDKTIRIWD 478
+ S+D +RIW+
Sbjct: 384 FMSGSIDGKVRIWN 397
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 523 AHQSDINVISWNGKEPFIASGGDDGFLHIW 612
AH I + ++ F+AS G+DG + +W
Sbjct: 219 AHDGAILAMKFSNDGKFLASSGEDGIVRVW 248
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
HT+ + DI++SP++ LAT S DKT+R+WD
Sbjct: 692 HTAMITDIRFSPSQLR-LATSSFDKTVRVWD 721
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +2
Query: 296 LATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
LAT + + +W + G R +GH+S V + + P + +++ +C D IR W
Sbjct: 708 LATSSFDKTVRVWDADNKG---YSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYW 764
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/74 (27%), Positives = 40/74 (54%)
Frame = +2
Query: 293 MLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRI 472
++A+G R+I +WR + + L GH +++ D+ W+ ++ + + + S DKT+R
Sbjct: 67 LIASGSHDREIFLWRVHGD---CKNFMVLKGHKNAILDLHWT-SDGSQIVSASPDKTVRA 122
Query: 473 WDTRAAPQKACMSQ 514
WD Q M++
Sbjct: 123 WDVETGKQIKKMAE 136
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 568 PFIASGGDDGFLHIWDLRQ 624
P I SG DDG +WD+RQ
Sbjct: 152 PLIISGSDDGTAKLWDMRQ 170
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHG 556
L GHT V D+ WS + N+L + S DKT+R+W T C+ + VT + ++
Sbjct: 268 LYGHTGDVLDLAWS--DSNLLLSASKDKTVRLWRTGC---DQCLHVFHHNNYVTCVEFNP 322
Query: 557 MEKSHLLQAAV 589
+ K++ ++
Sbjct: 323 VNKNNFASGSI 333
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 520 NAHQSDINVISWNGKEPFIASGGDDGFLHIW 612
N H+ I + ++ ++A+GG+DG + IW
Sbjct: 195 NGHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 257 GFALDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQ-RPLVGHTSSVEDIQWSPNERN 433
G LD ++S +L + + + +WR DQ + H + V ++++P +N
Sbjct: 273 GDVLDLAWSDSNLLLSASKDKTVRLWRTG------CDQCLHVFHHNNYVTCVEFNPVNKN 326
Query: 434 VLATCSVDKTIRIW 475
A+ S+D RIW
Sbjct: 327 NFASGSIDGKARIW 340
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +2
Query: 356 WTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKV 535
+TVD++ GH ++ W P + + T S D +++WDT A + KM KV
Sbjct: 92 FTVDKQHENGHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTA---QAVVDFKMPGKV 148
Query: 536 TLMLYHGMEKSHLLQAA 586
M SH L AA
Sbjct: 149 YRTAMSSMAMSHTLIAA 165
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAA 490
L GH V ++WS + VL T D IR WD R A
Sbjct: 186 LSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRA 223
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/36 (25%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 520 NAHQSDINVISWNGKEPFIA-SGGDDGFLHIWDLRQ 624
+ H+ + + W+ ++ +GG DG + WD+R+
Sbjct: 187 SGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRR 222
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = +2
Query: 248 SAKGFALDWCPTESGMLATGDCRRDIHIWRPNEGG-TWTVD-QRPLVGHTSSVEDIQWSP 421
S++G+ L W + G L +G I +W N ++D Q+ H VED+ W
Sbjct: 178 SSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHL 237
Query: 422 NERNVLATCSVDKTIRIWDTRA-APQKACMSQLKMHIKVTLMLYH 553
+ + D+ + IWD R+ + K S + ++V + ++
Sbjct: 238 RHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFN 282
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 523 AHQSDINVISWNGKEPFI-ASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
AH+ + ++W+ + ++ S GDD +L IWDLR + S PV + H+ V + ++
Sbjct: 225 AHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFN 282
Score = 34.7 bits (76), Expect = 0.059
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
GHTS + D W+P E V+++ + D ++IW
Sbjct: 372 GHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +1
Query: 526 HQSDINVISWNG-KEPFIASGGDDGFLHIWDLRQFTNSTPVGT---FKHHTAPVTSVEWH 693
H S+ +SW+ K+ + SG DD + +WD+ + + FK H V V WH
Sbjct: 177 HSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWH 236
Score = 32.3 bits (70), Expect = 0.31
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
H V + W+P +LA+C + + + +WD
Sbjct: 316 HKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
Score = 30.7 bits (66), Expect = 0.96
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTR 484
+V H+ V + ++P V+AT S DKT++++D R
Sbjct: 269 VVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLR 304
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +2
Query: 326 HIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQ 496
H +P G D + L GH+S + WS ++ L + S D I +WD A P+
Sbjct: 158 HPSKPPLDGACNPDLK-LRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPK 213
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/84 (28%), Positives = 37/84 (44%)
Frame = +2
Query: 230 ILI*RASAKGFALDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDI 409
++I R + + W P E+ A G + + I + W V + H SSV +
Sbjct: 93 LVILRLNRAALCVQWSPKEN-KFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVTSV 151
Query: 410 QWSPNERNVLATCSVDKTIRIWDT 481
W PN +LAT S D R++ T
Sbjct: 152 AWHPN-NVLLATTSTDGKCRVFST 174
>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/84 (28%), Positives = 37/84 (44%)
Frame = +2
Query: 230 ILI*RASAKGFALDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDI 409
++I R + + W P E+ A G + + I + W V + H SSV +
Sbjct: 93 LVILRLNRAALCVQWSPKEN-KFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVTSV 151
Query: 410 QWSPNERNVLATCSVDKTIRIWDT 481
W PN +LAT S D R++ T
Sbjct: 152 AWHPN-NVLLATTSTDGKCRVFST 174
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/84 (28%), Positives = 37/84 (44%)
Frame = +2
Query: 230 ILI*RASAKGFALDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDI 409
++I R + + W P E+ A G + + I + W V + H SSV +
Sbjct: 93 LVILRLNRAALCVQWSPKEN-KFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVTSV 151
Query: 410 QWSPNERNVLATCSVDKTIRIWDT 481
W PN +LAT S D R++ T
Sbjct: 152 AWHPN-NVLLATTSTDGKCRVFST 174
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +2
Query: 293 MLATGDCRRDIHIWR--PNEGG-TWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKT 463
+LA+G ++ IW+ P+E +W V + L H V D+QWSP++ L + SVD +
Sbjct: 19 LLASGADGGELFIWKLHPSETNQSWKV-HKSLSFHRKDVLDLQWSPDDA-YLISGSVDNS 76
Query: 464 IRIWD 478
IWD
Sbjct: 77 CIIWD 81
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 624
H+ D+ + W+ + ++ SG D IWD+ +
Sbjct: 52 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNK 84
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 38.3 bits (85), Expect = 0.005
Identities = 27/89 (30%), Positives = 44/89 (49%)
Frame = +2
Query: 263 ALDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLA 442
AL T +L +G I +W ++GG V L GHT SV + + +L
Sbjct: 264 ALALSGTNGSLLHSGGSDGSILVWERDDGGDIVVVGM-LRGHTESVLCLAVVSD---ILC 319
Query: 443 TCSVDKTIRIWDTRAAPQKACMSQLKMHI 529
+ S DKT+R+W +A +C++ L+ H+
Sbjct: 320 SGSADKTVRLWKC-SAKDYSCLAMLEGHL 347
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 526 HQSDINVISWNGKE-PFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPV 675
H S IN ++ +G + SGG DG + +W+ + VG + HT V
Sbjct: 258 HNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESV 308
Score = 27.5 bits (58), Expect = 8.9
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 6/95 (6%)
Frame = +2
Query: 281 TESGMLATGDCRRDIHIWRP--NEGGTWTVDQRPLVG----HTSSVEDIQWSPNERNVLA 442
+E+G + TG + I +WR NE + LV H S + + S ++L
Sbjct: 217 SENGDIYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLH 276
Query: 443 TCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLML 547
+ D +I +W+ + L+ H + L L
Sbjct: 277 SGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCL 311
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +2
Query: 380 VGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHGM 559
+GH+ + DI WS N R L + SVD ++R+W + C+ + VT + ++ +
Sbjct: 353 LGHSGDILDISWSKNNR--LLSASVDNSVRLWQIGC---EDCLGIFSHNNYVTSVQFNPV 407
Query: 560 EKSHLLQAAV 589
+ H + ++
Sbjct: 408 DDDHFISGSI 417
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 523 AHQSDINVISWNGKEPFIASGGDDGFLHIWDL 618
AH+ I + ++ ++AS G+DG L +W +
Sbjct: 249 AHEGAILAMKFSPDGRYLASAGEDGVLRVWSV 280
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +2
Query: 380 VGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHGM 559
+GH+ + DI WS N R L + SVD ++R+W + C+ + VT + ++ +
Sbjct: 353 LGHSGDILDISWSKNNR--LLSASVDNSVRLWQIGC---EDCLGIFSHNNYVTSVQFNPV 407
Query: 560 EKSHLLQAAV 589
+ H + ++
Sbjct: 408 DDDHFISGSI 417
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 523 AHQSDINVISWNGKEPFIASGGDDGFLHIWDL 618
AH+ I + ++ ++AS G+DG L +W +
Sbjct: 249 AHEGAILAMKFSPDGRYLASAGEDGVLRVWSV 280
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/69 (24%), Positives = 39/69 (56%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHGME 562
GH V D+ WS ++ +L + S+DKT+R+WD ++C+ + VT + ++ ++
Sbjct: 517 GHLDDVLDLSWSRSQ--LLLSSSMDKTVRLWDIET---QSCLKLFAHNDYVTCVQFNPLD 571
Query: 563 KSHLLQAAV 589
+ + + ++
Sbjct: 572 EDYFISGSL 580
Score = 31.5 bits (68), Expect = 0.55
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 502 LHVTAE-NAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 624
LH+ E AHQ I + ++ +AS G+D +H+W++++
Sbjct: 401 LHMCQEIQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQE 442
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +2
Query: 281 TESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDK 460
T + +G +H+W N + L GHT +V ++ P E N++A+ S+DK
Sbjct: 253 TNGKRIVSGSEDNCVHMWELNSKKLL----QKLEGHTETVMNVACHPTE-NLIASGSLDK 307
Query: 461 TIRIW 475
T+RIW
Sbjct: 308 TVRIW 312
Score = 34.3 bits (75), Expect = 0.078
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 371 RPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMH 526
+ L+GHT+ + ++P + N++ + S D+T+RIWD C+ L H
Sbjct: 107 KTLIGHTNYAFCVNFNP-QSNMIVSGSFDETVRIWDVTTG---KCLKVLPAH 154
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
GH + + D+ +S + R +++ S DKT+++WD
Sbjct: 69 GHENGISDVAFSSDARFIVSA-SDDKTLKLWD 99
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDL 618
H++ I+ ++++ FI S DD L +WD+
Sbjct: 70 HENGISDVAFSSDARFIVSASDDKTLKLWDV 100
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +2
Query: 293 MLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRI 472
M A+GD R+ +W + T V ++ HT+ + + WSPN + ++AT S+D + +
Sbjct: 370 MFASGDANREAVVW---DRETKQVKLNNMLFHTARINSLAWSPNNK-MVATGSIDTCVIV 425
Query: 473 WD 478
++
Sbjct: 426 YE 427
Score = 35.5 bits (78), Expect = 0.034
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
GH S+ + WSP+ + VL T S DK+ ++W+
Sbjct: 94 GHKGSIYAVSWSPDSKRVL-TVSADKSAKVWE 124
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 541 NVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW 690
+VIS +GKE + GG DG LHI+ + N + H +T + +
Sbjct: 317 SVISPDGKEAIV--GGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRY 364
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 508 VTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDL 618
+TA NAH +N +++ + +AS G+D + +W +
Sbjct: 436 ITARNAHLGGVNAVAFI-DDCTVASSGEDASVRLWHI 471
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMH 526
GH+S + D+ WS ++ + + S D T+RIWD R+ + C+ L+ H
Sbjct: 83 GHSSGISDLAWS-SDSHYTCSASDDCTLRIWDARSPYE--CLKVLRGH 127
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/35 (42%), Positives = 27/35 (77%)
Frame = +2
Query: 371 RPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
+ L GHT+++ +++S N+ N+LA+ SVDKT+ +W
Sbjct: 37 KTLEGHTAAISCVKFS-NDGNLLASASVDKTMILW 70
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/70 (27%), Positives = 37/70 (52%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHG 556
L GHT+ V + ++P N++ + S D+TIRIW+ + C+ +K H ++
Sbjct: 124 LRGHTNFVFCVNFNPPS-NLIVSGSFDETIRIWEVKTG---KCVRMIKAHSMPISSVHFN 179
Query: 557 MEKSHLLQAA 586
+ S ++ A+
Sbjct: 180 RDGSLIVSAS 189
Score = 31.1 bits (67), Expect = 0.73
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLR 621
H S I+ ++W+ + S DD L IWD R
Sbjct: 84 HSSGISDLAWSSDSHYTCSASDDCTLRIWDAR 115
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCS-VDKTIRIW 475
L GHT +V + P + + ++ + +DKTIRIW
Sbjct: 296 LEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = +1
Query: 508 VTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVE 687
V A H+S+ + + ++ F+ASG D L +WD R+ + T+K HT ++++E
Sbjct: 42 VRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRK---KGCIQTYKGHTRGISTIE 98
Query: 688 W 690
+
Sbjct: 99 F 99
Score = 34.7 bits (76), Expect = 0.059
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
H I+ I ++ ++ SGG D + +WDL T + FK H P+ S+++H
Sbjct: 90 HTRGISTIEFSPDGRWVVSGGLDNVVKVWDL---TAGKLLHEFKCHEGPIRSLDFH 142
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 371 RPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIK 532
R GH S+ +++ P LA+ S D +R+WDTR +K C+ K H +
Sbjct: 43 RAFTGHRSNCSAVEFHPFGE-FLASGSSDTNLRVWDTR---KKGCIQTYKGHTR 92
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +2
Query: 296 LATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
LA+G ++ +W + G + GHT + I++SP+ R V++ +D +++W
Sbjct: 64 LASGSSDTNLRVWDTRKKGCIQTYK----GHTRGISTIEFSPDGRWVVSG-GLDNVVKVW 118
Query: 476 DTRA 487
D A
Sbjct: 119 DLTA 122
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
L GHTS V+ + ++ E VLA S I++WD
Sbjct: 3 LCGHTSPVDSVAFNSEEVLVLAGAS-SGVIKLWD 35
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/68 (23%), Positives = 34/68 (50%)
Frame = +1
Query: 490 TTKGLHVTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTA 669
T G + + + H++ + + WN ++ + D + ++D+R + +F+ HT
Sbjct: 297 TRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKE---LQSFRGHTK 353
Query: 670 PVTSVEWH 693
VTS+ WH
Sbjct: 354 DVTSLAWH 361
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
H D+ + W+ + + SGG D + +WD R + + + H V SV+W+
Sbjct: 267 HGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTR---SGRELCSLHGHKNIVLSVKWN 319
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHGME 562
GH V+ + W P +++L + D+ +++WDTR+ + + L H + L +
Sbjct: 266 GHGWDVKSVDWHPT-KSLLVSGGKDQLVKLWDTRSGRE---LCSLHGHKNIVLSVKWNQN 321
Query: 563 KSHLLQAA 586
+ LL A+
Sbjct: 322 GNWLLTAS 329
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = +2
Query: 272 WCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCS 451
W E+ M++ GD + W+ N + H S+ D+ + + +CS
Sbjct: 173 WSHNENYMVS-GDDGGTLKYWQNNMNNV----KANKTAHKESIRDLSFCKTDLK-FCSCS 226
Query: 452 VDKTIRIWD 478
D T+++WD
Sbjct: 227 DDTTVKVWD 235
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 37.1 bits (82), Expect = 0.011
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 520 NAHQSDINVISW--NGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
+AHQ +N + + G +P++ +G DD +WD + + V T + HT V++V +H
Sbjct: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD---YQTKSCVQTLEGHTHNVSAVCFH 238
Score = 36.3 bits (80), Expect = 0.019
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 278 PTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVD 457
PT +L++ D I +W +G W Q GH+ V + ++P + N A+ S+D
Sbjct: 109 PTLPYVLSSSDDML-IKLWDWEKG--WACTQI-FEGHSHYVMQVTFNPKDTNTFASASLD 164
Query: 458 KTIRIWD 478
+TI+IW+
Sbjct: 165 RTIKIWN 171
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
L GHT +V + + P E ++ T S D T+RIW
Sbjct: 225 LEGHTHNVSAVCFHP-ELPIIITGSEDGTVRIW 256
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 493 TKGLHVTAENAHQSDINVISWNGKEPFIASGGDDGFLHIW 612
TK T E H +++ + ++ + P I +G +DG + IW
Sbjct: 218 TKSCVQTLEG-HTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Frame = +2
Query: 272 WCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSP----NERNVL 439
W P + L +G +I W P +G ++ PL GH + I W P +
Sbjct: 159 WSP-DGKHLVSGSKSGEICCWNPKKG---ELEGSPLTGHKKWITGISWEPVHLSSPCRRF 214
Query: 440 ATCSVDKTIRIWDTRAAPQKACMS 511
T S D RIWD C+S
Sbjct: 215 VTSSKDGDARIWDITLKKSIICLS 238
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +2
Query: 296 LATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
+A+ + + +W G TV + GH V + WS + R +L + S D T++IW
Sbjct: 375 IASASFDKSVRLWNGITGQFVTVFR----GHVGPVYQVSWSADSR-LLLSGSKDSTLKIW 429
Query: 476 DTRAAPQK 499
+ R K
Sbjct: 430 EIRTKKLK 437
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 499 GLHVTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLR 621
G VT H + +SW+ + SG D L IW++R
Sbjct: 392 GQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIR 432
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +2
Query: 296 LATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
L +G + +W P+ ++ L GH V + +SP+ + + A+ S DK++R+W
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQ---PKKRLTGHQQLVNHVYFSPDGKWI-ASASFDKSVRLW 387
Query: 476 D 478
+
Sbjct: 388 N 388
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
+ GH +V + +SP+ + LA+ S D T+R+WD
Sbjct: 105 IAGHAEAVLCVSFSPDGKQ-LASGSGDTTVRLWD 137
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW 690
H + +S++ +ASG D + +WDL +T TP+ T K H V +V W
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRLWDL--YT-ETPLFTCKGHKNWVLTVAW 159
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/72 (26%), Positives = 34/72 (47%)
Frame = +2
Query: 260 FALDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVL 439
+ + W +S +L +G + IW E T + Q L GH V + WSP+ V+
Sbjct: 406 YQVSWS-ADSRLLLSGSKDSTLKIW---EIRTKKLKQ-DLPGHADEVFAVDWSPDGEKVV 460
Query: 440 ATCSVDKTIRIW 475
+ D+ +++W
Sbjct: 461 SG-GKDRVLKLW 471
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
H +NV+ + ++ SGG+D + +WDL T + FK H + S+++H
Sbjct: 142 HTRGVNVLRFTPDGRWVVSGGEDNIVKVWDL---TAGKLLTEFKSHEGQIQSLDFH 194
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
H S I+ ++++ E +A+G G + +WDL + + V T H + SV++H
Sbjct: 58 HSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE---AKIVRTLTGHRSNCISVDFH 110
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
H ++ + + P+E +LAT S D+T++ WD
Sbjct: 184 HEGQIQSLDFHPHEF-LLATGSADRTVKFWD 213
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPV 675
H+S+ + ++ F ASG D L IWD+R+ + T+K HT V
Sbjct: 100 HRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK---KGCIHTYKGHTRGV 146
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
H +NV+ + ++ SGG+D + +WDL T + FK H + S+++H
Sbjct: 142 HTRGVNVLRFTPDGRWVVSGGEDNIVKVWDL---TAGKLLTEFKSHEGQIQSLDFH 194
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
H S I+ ++++ E +A+G G + +WDL + + V T H + SV++H
Sbjct: 58 HSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE---AKIVRTLTGHRSNCISVDFH 110
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
H ++ + + P+E +LAT S D+T++ WD
Sbjct: 184 HEGQIQSLDFHPHEF-LLATGSADRTVKFWD 213
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPV 675
H+S+ + ++ F ASG D L IWD+R+ + T+K HT V
Sbjct: 100 HRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK---KGCIHTYKGHTRGV 146
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW 690
H+S++ + W+ + +ASGG+D L +W+ + P+ HTA V ++ W
Sbjct: 297 HKSEVCGLKWSHDDRELASGGNDNQLLVWNNH---SQQPILKLTEHTAAVKAITW 348
Score = 34.7 bits (76), Expect = 0.059
Identities = 15/37 (40%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLAT--CSVDKTIRIWDT 481
L HT++V+ I WSP++ ++LA+ + D+ IR W+T
Sbjct: 336 LTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNT 372
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRA 487
LVGH S V ++WS ++R LA+ D + +W+ +
Sbjct: 294 LVGHKSEVCGLKWSHDDRE-LASGGNDNQLLVWNNHS 329
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
H +NV+ + +I SGG+D + +WDL T + FK H + S+++H
Sbjct: 235 HTRGVNVLRFTPDGRWIVSGGEDNVVKVWDL---TAGKLLHEFKSHEGKIQSLDFH 287
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
H S I+ ++++ E +A+G G + +WDL + + V T H + SV +H
Sbjct: 151 HSSGIDSVTFDASEGLVAAGAASGTIKLWDLEE---AKVVRTLTGHRSNCVSVNFH 203
Score = 30.7 bits (66), Expect = 0.96
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
H ++ + + P+E +LAT S DKT++ WD
Sbjct: 277 HEGKIQSLDFHPHEF-LLATGSADKTVKFWD 306
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPV 675
H+S+ ++++ F ASG D L IWD+R+ + T+K HT V
Sbjct: 193 HRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK---KGCIHTYKGHTRGV 239
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 36.7 bits (81), Expect = 0.015
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
GH S+ + WSP+ + VL T S DK+ +IWD
Sbjct: 230 GHKGSIYAVSWSPDGKQVL-TVSADKSAKIWD 260
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +1
Query: 517 ENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 624
ENAH+ +N + N E IASG D G + IWD RQ
Sbjct: 33 ENAHEDAVNTLI-NVTETTIASGDDKGCVKIWDTRQ 67
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +1
Query: 517 ENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 624
ENAH+ +N + N E IASG D G + IWD RQ
Sbjct: 90 ENAHEDAVNTLI-NVTETTIASGDDKGCVKIWDTRQ 124
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +1
Query: 505 HVTAENAHQSDINVISWNGKEPF-IASGGDDGFLHIWDLRQFTNSTPV--GTFKHHTAPV 675
HV + H+ + + +N K P +ASG DDG + IWDL + + GT + + +
Sbjct: 107 HVRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDLANPSKPSHYLKGTGSYMQSEI 166
Query: 676 TSVEWH 693
+S+ W+
Sbjct: 167 SSLSWN 172
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 371 RPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTR 484
R VGH V ++W P++ L TC D W+T+
Sbjct: 246 RTFVGHQRGVIAMEWCPSDSLYLLTCGKDNRTICWNTK 283
Score = 31.5 bits (68), Expect = 0.55
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 263 ALDWCPTESGMLAT-GDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVL 439
A++WCP++S L T G R I W G V + P G + D+ W P V+
Sbjct: 257 AMEWCPSDSLYLLTCGKDNRTI-CWNTKTGKI--VAELP-TGQNWNF-DVHWYPKMPGVI 311
Query: 440 ATCSVDKTIRIWD 478
+ SVD I I++
Sbjct: 312 SASSVDGKIGIYN 324
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTP----VGTFKHHTAPVTSVEW 690
H ++ + W+ ASGG+D +HIWD R +S + F+ HTA V ++ W
Sbjct: 251 HTEEVCGLKWSESGNKQASGGNDNVVHIWD-RSLASSKQTRQWLHRFEEHTAAVRALAW 308
Score = 33.5 bits (73), Expect = 0.14
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Frame = +2
Query: 197 LGDSFKSRQTYILI*RASAKGFALDWCPTESGMLATGDCRRD--IHIWRPNEGGTWTVDQ 370
L S ++RQ +A AL WCP ++ +LATG D I W + G
Sbjct: 283 LASSKQTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLN--- 339
Query: 371 RPLVGHTSSVEDIQWSPNERNVLATCS-VDKTIRIWDTRAAPQKACMSQLKMHIKVTLML 547
V S V + WS +ER +L++ + +W P + M++L H L +
Sbjct: 340 --SVETGSQVCSLLWSQSERELLSSHGFTQNQLTLW---KYPSMSKMAELNGHTSRVLFM 394
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 36.3 bits (80), Expect = 0.019
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 520 NAHQSDINVISW--NGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
+AHQ +N + + G +P++ +G DD +WD + + V T HT V++V +H
Sbjct: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD---YQTKSCVQTLDGHTHNVSAVCFH 238
Score = 35.5 bits (78), Expect = 0.034
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +2
Query: 278 PTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVD 457
PT +L++ D I +W G W Q GH+ V + ++P + N A+ S+D
Sbjct: 109 PTLPYVLSSSDDML-IKLWDWENG--WACTQI-FEGHSHYVMQVVFNPKDTNTFASASLD 164
Query: 458 KTIRIWD 478
+TI+IW+
Sbjct: 165 RTIKIWN 171
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
L GHT +V + + P E ++ T S D T+RIW
Sbjct: 225 LDGHTHNVSAVCFHP-ELPIIITGSEDGTVRIW 256
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 36.3 bits (80), Expect = 0.019
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 520 NAHQSDINVISW--NGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
+AHQ +N + + G +P++ +G DD +WD + + V T HT V++V +H
Sbjct: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD---YQTKSCVQTLDGHTHNVSAVCFH 238
Score = 35.5 bits (78), Expect = 0.034
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +2
Query: 278 PTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVD 457
PT +L++ D I +W G W Q GH+ V + ++P + N A+ S+D
Sbjct: 109 PTLPYVLSSSDDML-IKLWDWENG--WACTQI-FEGHSHYVMQVVFNPKDTNTFASASLD 164
Query: 458 KTIRIWD 478
+TI+IW+
Sbjct: 165 RTIKIWN 171
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
L GHT +V + + P E ++ T S D T+RIW
Sbjct: 225 LDGHTHNVSAVCFHP-ELPIIITGSEDGTVRIW 256
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 36.3 bits (80), Expect = 0.019
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 520 NAHQSDINVISW--NGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
+AHQ +N + + G +P++ +G DD +WD + + V T HT V++V +H
Sbjct: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD---YQTKSCVQTLDGHTHNVSAVCFH 238
Score = 35.5 bits (78), Expect = 0.034
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +2
Query: 278 PTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVD 457
PT +L++ D I +W G W Q GH+ V + ++P + N A+ S+D
Sbjct: 109 PTLPYVLSSSDDML-IKLWDWENG--WACTQI-FEGHSHYVMQVVFNPKDTNTFASASLD 164
Query: 458 KTIRIWD 478
+TI+IW+
Sbjct: 165 RTIKIWN 171
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
L GHT +V + + P E ++ T S D T+RIW
Sbjct: 225 LDGHTHNVSAVCFHP-ELPIIITGSEDGTVRIW 256
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 36.3 bits (80), Expect = 0.019
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 323 IHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNV--LATCSVDKTIRIWDTR 484
I +WR +G +V L GHT +V I +SP + +V L + S D T RIWD R
Sbjct: 371 IRVWRLPDGMPISV----LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDAR 422
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 371 RPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
+ L GH+ V D +S N + + A+ S+DKTIR+W+
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYI-ASSSLDKTIRVWE 244
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 386 HTSSVEDIQWS-PNERNVLATCSVDKTIRIWD 478
H V DI +S PN++ + TC DKTI++WD
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWD 492
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 386 HTSSVEDIQWS-PNERNVLATCSVDKTIRIWD 478
H V DI +S PN++ + TC DKTI++WD
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWD 492
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 386 HTSSVEDIQWS-PNERNVLATCSVDKTIRIWD 478
H V DI +S PN++ + TC DKTI++WD
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWD 492
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 386 HTSSVEDIQWS-PNERNVLATCSVDKTIRIWD 478
H V DI +S PN++ + TC DKTI++WD
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWD 492
>At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 512
Score = 35.9 bits (79), Expect = 0.025
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 550 SWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
SW+ +I SG D +H++D+R + P + K H V EWH
Sbjct: 445 SWSPDGLYITSGSVDPVIHVFDIR-YNARKPTQSIKAHQKRVFKAEWH 491
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 523 AHQSDINVISWNGKEP-FIASGGDDGFLHIWDLRQFT-NSTPVGTFKHHTAPVTSVE 687
AH SD+N + + + I SG DD +WD R F P G H VT ++
Sbjct: 269 AHTSDVNTVCFADESGNLILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFID 325
Score = 34.7 bits (76), Expect = 0.059
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 565 EPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
+ +I +G +D ++I+DL + V KHH++PV WH
Sbjct: 413 QKYIYTGSNDSSVYIYDL---VSGDKVAVLKHHSSPVRDCNWH 452
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTP 642
H + I G + S G D + +WD+R+ ++S P
Sbjct: 317 HLEGVTFIDSRGDGRYFISNGKDQTIKLWDIRKMSSSAP 355
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 380 VGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTR 484
V HTS V + ++ N++ + S D ++WD R
Sbjct: 268 VAHTSDVNTVCFADESGNLILSGSDDNLCKVWDRR 302
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 35.9 bits (79), Expect = 0.025
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 371 RPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAA 490
R GH V ++W P++ + L TC+ D WDT A
Sbjct: 257 REFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTA 296
Score = 30.7 bits (66), Expect = 0.96
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +2
Query: 266 LDWCPTESGMLATGDCRRDIHIW---RPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNV 436
L++ S +LA+G +I IW +P+E + + + + I W+ + +
Sbjct: 128 LEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISWNRKVQQI 187
Query: 437 LATCSVDKTIRIWDTR 484
LA+ S + T IWD R
Sbjct: 188 LASTSYNGTTVIWDLR 203
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = +2
Query: 263 ALDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLA 442
A++WCP++S L T C +D + V + P G+ + D+ W P V++
Sbjct: 268 AMEWCPSDSSYLLT--CAKDNRTICWDTNTAEIVAELP-AGNNWNF-DVHWYPKIPGVIS 323
Query: 443 TCSVDKTIRIWD 478
S D I I++
Sbjct: 324 ASSFDGKIGIYN 335
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 520 NAHQSDINVISWNG-KEPFIASGGDDGFLHIWDL 618
+ H+ + + +N +ASG DDG + IWDL
Sbjct: 119 SVHKGPVRGLEFNAISSNLLASGADDGEICIWDL 152
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 35.9 bits (79), Expect = 0.025
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 371 RPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAA 490
R GH V ++W P++ + L TC+ D WDT A
Sbjct: 257 REFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTA 296
Score = 30.7 bits (66), Expect = 0.96
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +2
Query: 266 LDWCPTESGMLATGDCRRDIHIW---RPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNV 436
L++ S +LA+G +I IW +P+E + + + + I W+ + +
Sbjct: 128 LEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISWNRKVQQI 187
Query: 437 LATCSVDKTIRIWDTR 484
LA+ S + T IWD R
Sbjct: 188 LASTSYNGTTVIWDLR 203
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = +2
Query: 263 ALDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLA 442
A++WCP++S L T C +D + V + P G+ + D+ W P V++
Sbjct: 268 AMEWCPSDSSYLLT--CAKDNRTICWDTNTAEIVAELP-AGNNWNF-DVHWYPKIPGVIS 323
Query: 443 TCSVDKTIRIWD 478
S D I I++
Sbjct: 324 ASSFDGKIGIYN 335
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 520 NAHQSDINVISWNG-KEPFIASGGDDGFLHIWDL 618
+ H+ + + +N +ASG DDG + IWDL
Sbjct: 119 SVHKGPVRGLEFNAISSNLLASGADDGEICIWDL 152
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 302 TGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDT 481
+G C + +W GG + H + + W P N+LAT S DKT++ WDT
Sbjct: 89 SGGCDKQAKMWPLLSGGQPVT----VAMHEGPIAAMAWIPG-MNLLATGSWDKTLKYWDT 143
Query: 482 R 484
R
Sbjct: 144 R 144
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 35.9 bits (79), Expect = 0.025
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 278 PTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVD 457
PT +L++ D I +W +G W Q GH+ V + ++P + N A+ S+D
Sbjct: 109 PTLPYVLSSSDDML-IKLWDWEKG--WLCTQI-FEGHSHYVMQVTFNPKDTNTFASASLD 164
Query: 458 KTIRIWD 478
+TI+IW+
Sbjct: 165 RTIKIWN 171
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 520 NAHQSDINVISW--NGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
+AH +N + + G +P++ +G DD +WD + + V T + HT V++V +H
Sbjct: 182 DAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWD---YQTKSCVQTLEGHTHNVSAVSFH 238
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 493 TKGLHVTAENAHQSDINVISWNGKEPFIASGGDDGFLHIW 612
TK T E H +++ +S++ + P I +G +DG + IW
Sbjct: 218 TKSCVQTLEG-HTHNVSAVSFHPELPIIITGSEDGTVRIW 256
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
L GHT +V + + P E ++ T S D T+RIW
Sbjct: 225 LEGHTHNVSAVSFHP-ELPIIITGSEDGTVRIW 256
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +1
Query: 508 VTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVE 687
V A H+S+ + + ++ F+ASG D L IWD+R+ + T+K H+ ++++
Sbjct: 93 VRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRK---KGCIQTYKGHSRGISTIR 149
Query: 688 W 690
+
Sbjct: 150 F 150
Score = 35.1 bits (77), Expect = 0.045
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
H I+ I + ++ SGG D + +WDL T + FK H P+ S+++H
Sbjct: 141 HSRGISTIRFTPDGRWVVSGGLDNVVKVWDL---TAGKLLHEFKFHEGPIRSLDFH 193
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAA 490
L GHTS+V+ + + E VLA S I++WD A
Sbjct: 54 LCGHTSAVDSVAFDSAEVLVLAGAS-SGVIKLWDVEEA 90
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = +1
Query: 505 HVTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSV 684
++ + H D+N ++++ +A+G DD + +W++ + T TF HT VT++
Sbjct: 341 YILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNV---MSGTCFITFTEHTNAVTAL 397
Query: 685 EW 690
+
Sbjct: 398 HF 399
Score = 31.1 bits (67), Expect = 0.73
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 320 DIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAA 490
+I +W G + L GH + V + +SP + +LA+ S D T+R+WD A+
Sbjct: 458 EIFVWSKKTGQIKDI----LSGHEAPVHGLMFSPLTQ-LLASSSWDYTVRLWDVFAS 509
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +2
Query: 284 ESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKT 463
+S +LATG + +W G + HT++V + + + ++L+ S+D T
Sbjct: 360 DSQLLATGADDNKVKVWNVMSGTCFIT----FTEHTNAVTALHFMADNHSLLSA-SLDGT 414
Query: 464 IRIWD 478
+R WD
Sbjct: 415 VRAWD 419
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = +1
Query: 505 HVTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSV 684
++ + H D+N ++++ +A+G DD + +W++ + T TF HT VT++
Sbjct: 381 YILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNV---MSGTCFITFTEHTNAVTAL 437
Query: 685 EW 690
+
Sbjct: 438 HF 439
Score = 31.1 bits (67), Expect = 0.73
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 320 DIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAA 490
+I +W G + L GH + V + +SP + +LA+ S D T+R+WD A+
Sbjct: 498 EIFVWSKKTGQIKDI----LSGHEAPVHGLMFSPLTQ-LLASSSWDYTVRLWDVFAS 549
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +2
Query: 284 ESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKT 463
+S +LATG + +W G + HT++V + + + ++L+ S+D T
Sbjct: 400 DSQLLATGADDNKVKVWNVMSGTCFIT----FTEHTNAVTALHFMADNHSLLSA-SLDGT 454
Query: 464 IRIWD 478
+R WD
Sbjct: 455 VRAWD 459
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 35.5 bits (78), Expect = 0.034
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +2
Query: 272 WCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLV-GHTSSVEDIQWSPNERNVLATC 448
+ P E L T + +W G +V GHT+ V + S + N +
Sbjct: 164 YVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISG 223
Query: 449 SVDKTIRIWDTRAA 490
S D T R+WDTRAA
Sbjct: 224 SCDSTARLWDTRAA 237
Score = 35.1 bits (77), Expect = 0.045
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +2
Query: 335 RPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
R + G T V R L GHT V + W+P ERN + + S D + +W+
Sbjct: 47 RVSFGATDLVCCRTLQGHTGKVYSLDWTP-ERNRIVSASQDGRLIVWN 93
Score = 32.3 bits (70), Expect = 0.31
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = +2
Query: 341 NEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
++ GT V R L GH V Q+ PNE L T S D+T +WD
Sbjct: 141 DKDGTVPVS-RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWD 185
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 35.5 bits (78), Expect = 0.034
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +2
Query: 272 WCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLV-GHTSSVEDIQWSPNERNVLATC 448
+ P E L T + +W G +V GHT+ V + S + N +
Sbjct: 102 YVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISG 161
Query: 449 SVDKTIRIWDTRAA 490
S D T R+WDTRAA
Sbjct: 162 SCDSTARLWDTRAA 175
Score = 32.3 bits (70), Expect = 0.31
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = +2
Query: 341 NEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
++ GT V R L GH V Q+ PNE L T S D+T +WD
Sbjct: 79 DKDGTVPVS-RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWD 123
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 35.5 bits (78), Expect = 0.034
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +2
Query: 272 WCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLV-GHTSSVEDIQWSPNERNVLATC 448
+ P E L T + +W G +V GHT+ V + S + N +
Sbjct: 164 YVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISG 223
Query: 449 SVDKTIRIWDTRAA 490
S D T R+WDTRAA
Sbjct: 224 SCDSTARLWDTRAA 237
Score = 35.1 bits (77), Expect = 0.045
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +2
Query: 335 RPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
R + G T V R L GHT V + W+P ERN + + S D + +W+
Sbjct: 47 RVSFGATDLVCCRTLQGHTGKVYSLDWTP-ERNRIVSASQDGRLIVWN 93
Score = 32.3 bits (70), Expect = 0.31
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = +2
Query: 341 NEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
++ GT V R L GH V Q+ PNE L T S D+T +WD
Sbjct: 141 DKDGTVPVS-RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWD 185
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 35.1 bits (77), Expect = 0.045
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Frame = +2
Query: 263 ALDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVE---DIQWSPNERN 433
++ W T + +TG+ ++ I +WR N TV G S+ E I +S
Sbjct: 48 SVKWNHTNLVVASTGEDKK-ISLWRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSR 106
Query: 434 VLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHGMEKSHLLQAAV 589
+ + + ++IWD + +K C+ +LK H + + + HL +V
Sbjct: 107 YICSGGTGQIVKIWDLQ---RKLCIKKLKGHTSTITGVMYNCKDEHLASVSV 155
Score = 30.7 bits (66), Expect = 0.96
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 574 IASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSV 684
+ + GDDG +H+WD S + K H+AP V
Sbjct: 194 LVTAGDDGTVHLWDTT--GRSPKMSWLKQHSAPTAGV 228
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/82 (19%), Positives = 39/82 (47%)
Frame = +2
Query: 266 LDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLAT 445
LD+ + +L T +H+W G + + L H++ + +SP+ ++A+
Sbjct: 184 LDYSRSSRHLLVTAGDDGTVHLW-DTTGRSPKMSW--LKQHSAPTAGVCFSPSNEKIIAS 240
Query: 446 CSVDKTIRIWDTRAAPQKACMS 511
+DK + +D+ + +C++
Sbjct: 241 VGMDKKLYTYDSGSRRSSSCIA 262
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 538 INVISWNGK-EPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
++ IS++ K +I SGG + IWDL++ + K HT+ +T V ++
Sbjct: 95 LSAISFSKKGSRYICSGGTGQIVKIWDLQR---KLCIKKLKGHTSTITGVMYN 144
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 35.1 bits (77), Expect = 0.045
Identities = 20/65 (30%), Positives = 37/65 (56%)
Frame = +2
Query: 389 TSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHGMEKS 568
T SV ++++P E N+LAT + D++I I+D R + + ++ M K + ++ ME
Sbjct: 193 TDSVISVRFNPGEPNLLATSASDRSITIYDLRLS---SAARKIIMMTKTNSIAWNPMEPM 249
Query: 569 HLLQA 583
+L A
Sbjct: 250 NLTAA 254
Score = 31.5 bits (68), Expect = 0.55
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2
Query: 320 DIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
DI +W + TV Q P GH +V + S + NVL +C D T+R+W+
Sbjct: 80 DIRLW--DISSRRTVCQFP--GHQGAVRGLTAS-TDGNVLVSCGTDCTVRLWN 127
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 35.1 bits (77), Expect = 0.045
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 523 AHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
AH ++ I+W G F AS +DG + ++DLR +ST + + P+ + W+
Sbjct: 176 AHDKEVYDIAWGGVGVF-ASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWN 231
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 502 LHVTAENAHQSDINVISWNG-KEPFIASGGDDGFLHIWDL 618
L V HQ+ +N I+W I S GDD IWD+
Sbjct: 258 LPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDI 297
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQ 496
H +SV I W+P+ + + + D IWD + Q
Sbjct: 266 HQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQ 302
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 35.1 bits (77), Expect = 0.045
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNER---NVLATCSVDKTIRIWDTRAAPQ 496
GH+ +V I +S + +VL +CS D TIR WDTR+ Q
Sbjct: 81 GHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSFQQ 121
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAA 490
L GH V ++WS + VL T D IR WD R A
Sbjct: 186 LSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRA 223
Score = 34.7 bits (76), Expect = 0.059
Identities = 22/77 (28%), Positives = 34/77 (44%)
Frame = +2
Query: 356 WTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKV 535
+TV ++ GH ++ W P + + T S D +++WDT + + KM KV
Sbjct: 92 FTVRKQHENGHKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTS---QVVVDFKMPGKV 148
Query: 536 TLMLYHGMEKSHLLQAA 586
M SH L AA
Sbjct: 149 YRTAMSSMAMSHTLIAA 165
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/36 (25%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 520 NAHQSDINVISWNGKEPFIA-SGGDDGFLHIWDLRQ 624
+ H+ + + W+ ++ +GG DG + WD+R+
Sbjct: 187 SGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRR 222
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 34.7 bits (76), Expect = 0.059
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +1
Query: 550 SWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
SW+ I+SG D +HI+D+R + +P + K H V EWH
Sbjct: 589 SWSPDGLHISSGSADPVIHIFDIR-YNAPSPSLSMKAHKKRVFKAEWH 635
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
HT + + SP+ R + AT ++D + W
Sbjct: 337 HTKRMRSLALSPSNRELFATSALDGAVHFW 366
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 34.3 bits (75), Expect = 0.078
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +1
Query: 466 KNMGY*SSTTKGLHVTAE-NAHQSDINVISWNGKEPFIASGGDDGFLHIWDL--RQFTNS 636
+ M + SS + L E HQ +N ++WN + SG DD ++IW+ R+ +S
Sbjct: 28 QRMQFHSSLVRRLSQEQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHS 87
Query: 637 TPVGTFKHHTAPV 675
G HTA +
Sbjct: 88 IDTG----HTANI 96
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 34.3 bits (75), Expect = 0.078
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 520 NAHQSDINVISWNGKEPFI-ASGGDDGFLHIWDLRQ 624
N HQ INV+ ++ PF+ A+ D + +WDLRQ
Sbjct: 580 NMHQEHINVVKFSNHSPFLFATSSFDKDVKLWDLRQ 615
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 34.3 bits (75), Expect = 0.078
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +2
Query: 371 RPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
+ LVGH SV +I+ P + ++ T S D+++R+W+
Sbjct: 122 KSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWN 157
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = +2
Query: 278 PTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVD 457
P + ++ T + +W E G + GH V + + P++ A+C +D
Sbjct: 138 PLKPQLVITASKDESVRLWNV-ETGICILIFAGAGGHRYEVLSVDFHPSDIYRFASCGMD 196
Query: 458 KTIRIWDTR 484
TI+IW +
Sbjct: 197 TTIKIWSMK 205
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 34.3 bits (75), Expect = 0.078
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 260 FALDWCPTESGMLA-TGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNV 436
F D + G A +G ++ +W G T R VGHT V + +S + R +
Sbjct: 65 FVEDVVLSSDGQFALSGSWDGELRLWDLATGET----TRRFVGHTKDVLSVAFSTDNRQI 120
Query: 437 LATCSVDKTIRIWDT 481
++ S D+TI++W+T
Sbjct: 121 VSA-SRDRTIKLWNT 134
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 287 SGMLATGDCRRDIHIWR-PNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKT 463
S ++ T + I +W+ + ++ V QR L GH+ VED+ S + + L+ S D
Sbjct: 28 SDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSG-SWDGE 86
Query: 464 IRIWD 478
+R+WD
Sbjct: 87 LRLWD 91
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 624
H +N ++ + ASGG DG + +WDL +
Sbjct: 192 HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAE 224
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSV 684
H+ DI ++ + FIAS +D + +W L + PV + HT VT++
Sbjct: 286 HEGDITDLAVSSNNIFIASASNDCVIRVWRL---PDGLPVSVLRGHTGAVTAI 335
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHGME 562
GH V D+ WS ++ L + S+DKT+R+W+ + + C+ VT + ++ ++
Sbjct: 511 GHVDDVLDLAWSKSQH--LLSSSMDKTVRLWNLSS---QTCLKVFSHSDYVTCIQFNPVD 565
Query: 563 KSHLLQAAV 589
+ + ++
Sbjct: 566 DRYFISGSL 574
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 466 KNMGY*SSTTKGLHVTAE-NAHQSDINVISWNGKEPFIASGGDDGFLHIWDL 618
+ G S L+ T E AH I I ++ ++AS G+D +HIW +
Sbjct: 391 RQYGKSSKELTALYKTQEIQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQV 442
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +2
Query: 341 NEGGTWTVDQRPLV----GHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTR 484
N+ W + R L+ H + V +++ P ER LAT S D + IW R
Sbjct: 194 NQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGR 245
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDT 481
L GH V D+ +S + LAT S D+T +IW T
Sbjct: 102 LKGHKEHVTDVVFSSVDDECLATASTDRTEKIWKT 136
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 565 EPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW 690
+ F AS G D +WDLR N + F+ H V SV++
Sbjct: 142 QTFKASSGFDSLARVWDLRTARN---ILIFQGHIKQVLSVDF 180
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 33.9 bits (74), Expect = 0.10
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 260 FALDWCPTESGMLA-TGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNV 436
F D + G A +G ++ +W G V R VGHT V + +S + R +
Sbjct: 65 FVEDVVLSSDGQFALSGSWDGELRLWDLAAG----VSTRRFVGHTKDVLSVAFSLDNRQI 120
Query: 437 LATCSVDKTIRIWDT 481
++ S D+TI++W+T
Sbjct: 121 VSA-SRDRTIKLWNT 134
Score = 31.9 bits (69), Expect = 0.41
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 317 RDIHIWR-PNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRA 487
+ I +W+ + + V QR L GH+ VED+ S + + L+ S D +R+WD A
Sbjct: 38 KSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSG-SWDGELRLWDLAA 94
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 33.5 bits (73), Expect = 0.14
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHGMEK 565
HT V I +P++ + T S D+T+R+WDTR+ + + + + V + +H
Sbjct: 209 HTMGVCCISSNPSDPYSIFTGSYDETLRVWDTRSVSRPLNETSVSLGGGVWRIKHHPSLS 268
Query: 566 SHLLQAAVMMVFYISGT*DSLQIVLQWVHSNITLHQLHQW 685
+L A + F ++ D VL+ + + +L W
Sbjct: 269 GVVLAACMHNGFALAKVSDGKGEVLESYNKHHSLAYGADW 308
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 33.5 bits (73), Expect = 0.14
Identities = 22/83 (26%), Positives = 41/83 (49%)
Frame = +2
Query: 260 FALDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVL 439
+AL PT++ ++ATG +W+ G W + L GH SV + +S + +L
Sbjct: 74 YALACSPTDATLVATGGGDDKAFLWKIG-NGDWAAE---LPGHKDSVSCLAFS-YDGQLL 128
Query: 440 ATCSVDKTIRIWDTRAAPQKACM 508
A+ +D ++I+D + K +
Sbjct: 129 ASGGLDGVVQIFDASSGTLKCVL 151
Score = 32.3 bits (70), Expect = 0.31
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +1
Query: 499 GLHVTAENAHQSDINVISWNGKE---PFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTA 669
G V++ N+H + + ++ P A+GG D L IWDL+ +STP +H
Sbjct: 274 GKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQ---HSTPRFICEHEEG 330
Query: 670 PVTSVEW 690
VTS+ W
Sbjct: 331 -VTSLTW 336
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNV--LATCSVDKTIRIWDTR-AAPQKAC 505
L HT SVE +++SP+ + AT +DK + IWD + + P+ C
Sbjct: 280 LNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFIC 325
Score = 29.1 bits (62), Expect = 2.9
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWD 615
H+ + ++W G ++A+G +G + IWD
Sbjct: 327 HEEGVTSLTWIGTSKYLATGCANGTVSIWD 356
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTR 484
GHTS V + SP + +AT S D+T+R+WD +
Sbjct: 241 GHTSWVLSVDASP-DGGAIATGSSDRTVRLWDLK 273
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +2
Query: 260 FALDWCP-TES--GMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNER 430
+A W P TE +L TG + +WRP+E R GH+ V + P+
Sbjct: 18 WAATWVPATEDRPALLLTGSLDETVKLWRPDELDL----VRTNTGHSLGVAALAAHPS-G 72
Query: 431 NVLATCSVDKTIRIWD 478
+ A+ S+D +R++D
Sbjct: 73 IIAASSSIDSFVRVFD 88
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 272 WCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWS-PNERNVLATC 448
W P + +L + IH++ G+ + H V D+ ++ PN++ + TC
Sbjct: 417 WSP-DGNLLGVSFTKHLIHVYAYQ--GSDLRQHLEIDAHVGCVNDLAFAHPNKQMCVVTC 473
Query: 449 SVDKTIRIWD 478
DK I++WD
Sbjct: 474 GDDKLIKVWD 483
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 520 NAHQSDINVISWN--GKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSV 684
+AH +N +++ K+ + + GDD + +WDL + + TF+ H APV S+
Sbjct: 450 DAHVGCVNDLAFAHPNKQMCVVTCGDDKLIKVWDL----SGKKLFTFEGHEAPVYSI 502
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 287 SGMLATGDCRRDIHIWR-PNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKT 463
S ++ T + I +W+ E ++ V QR + GH+ V+D+ S + + L+ S D
Sbjct: 28 SDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSG-SWDGE 86
Query: 464 IRIWD 478
+R+WD
Sbjct: 87 LRLWD 91
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 371 RPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDT 481
R VGHT V + +S + R +++ S D+TI++W+T
Sbjct: 99 RRFVGHTKDVLSVAFSTDNRQIVSA-SRDRTIKLWNT 134
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 624
H +N ++ + ASGG DG + +WDL +
Sbjct: 192 HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAE 224
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 32.7 bits (71), Expect = 0.24
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +2
Query: 287 SGMLATGDCRRDIHIWRPNEGGTWTVDQ-RPLVGHTSSVEDIQWSPNERNVLATCSVDKT 463
+GML G I +W+ + + L GH S ++ VL + SVDKT
Sbjct: 276 NGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGHHSG--EVTCFVVGGEVLYSGSVDKT 333
Query: 464 IRIWDTRAAPQKACMSQLKMHI-KVTLML 547
I++WD C LK HI VT +L
Sbjct: 334 IKVWDLNTL---QCRMTLKQHIGTVTSLL 359
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMH 526
L GH+ V +++ + +++ T S DKT+RIW AC L H
Sbjct: 260 LTGHSKKVTSVKFV-GDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDH 308
Score = 31.5 bits (68), Expect = 0.55
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 505 HVTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTN 633
+V + H ++ IS++ F+A+ +DG + +WDLR+ N
Sbjct: 387 NVAKFDGHTGEVTAISFSENGYFLATAAEDG-VRLWDLRKLRN 428
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMH 526
L GH+ V +++ + +++ T S DKT+RIW AC L H
Sbjct: 260 LTGHSKKVTSVKFV-GDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDH 308
Score = 31.5 bits (68), Expect = 0.55
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 505 HVTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTN 633
+V + H ++ IS++ F+A+ +DG + +WDLR+ N
Sbjct: 387 NVAKFDGHTGEVTAISFSENGYFLATAAEDG-VRLWDLRKLRN 428
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 32.7 bits (71), Expect = 0.24
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHGME 562
GHT V I++ P + ++L + +D ++IWD + + CM H K + +
Sbjct: 280 GHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGK--CMRTYMGHAKAVRDICFSND 337
Query: 563 KSHLLQA 583
S L A
Sbjct: 338 GSKFLTA 344
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 371 RPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
R L H +W P E++ +ATC D I+ WD
Sbjct: 538 RTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYWD 573
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 430 ERISYMLCR*DHKNMGY*S-STTKGLHVTAENAHQSDINVISWNGKEPFIASGGDDGFLH 606
E I Y C + K+ + S T + + N ++ ++N + NG+ F+AS D G +
Sbjct: 71 ENILYASCGNEIKSFDVHTLSATSWKPLESYNYNKDEVNQVVCNGRSSFLASADDSGDVK 130
Query: 607 IWDLRQ 624
I DL Q
Sbjct: 131 IIDLGQ 136
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 430 ERISYMLCR*DHKNMGY*S-STTKGLHVTAENAHQSDINVISWNGKEPFIASGGDDGFLH 606
E I Y C + K+ + S T + + N ++ ++N + NG+ F+AS D G +
Sbjct: 71 ENILYASCGNEIKSFDVHTLSATSWKPLESYNYNKDEVNQVVCNGRSSFLASADDSGDVK 130
Query: 607 IWDLRQ 624
I DL Q
Sbjct: 131 IIDLGQ 136
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 32.3 bits (70), Expect = 0.31
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = +2
Query: 278 PTESGMLAT-GDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVE------DIQWSPNERNV 436
P+ +LA+ GD R +W NE + TV+ ++ ++ + E W+ E
Sbjct: 92 PSSGDLLASSGDFLR---LWEINEDSS-TVEPISVLNNSKTSEFCAPLTSFDWNDVEPKR 147
Query: 437 LATCSVDKTIRIWD 478
L TCS+D T IWD
Sbjct: 148 LGTCSIDTTCTIWD 161
Score = 31.5 bits (68), Expect = 0.55
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +1
Query: 526 HQSDINVISWNGKE-PFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTA--PVTSVEW 690
HQ+ +N I+W + I SGGDD IW+L + ++A + ++W
Sbjct: 263 HQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNGIDPMSVYSAGSEINQLQW 320
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 32.3 bits (70), Expect = 0.31
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = +2
Query: 278 PTESGMLAT-GDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVE------DIQWSPNERNV 436
P+ +LA+ GD R +W NE + TV+ ++ ++ + E W+ E
Sbjct: 92 PSSGDLLASSGDFLR---LWEINEDSS-TVEPISVLNNSKTSEFCAPLTSFDWNDVEPKR 147
Query: 437 LATCSVDKTIRIWD 478
L TCS+D T IWD
Sbjct: 148 LGTCSIDTTCTIWD 161
Score = 31.5 bits (68), Expect = 0.55
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +1
Query: 526 HQSDINVISWNGKE-PFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTA--PVTSVEW 690
HQ+ +N I+W + I SGGDD IW+L + ++A + ++W
Sbjct: 263 HQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNGIDPMSVYSAGSEINQLQW 320
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 32.3 bits (70), Expect = 0.31
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = +2
Query: 278 PTESGMLAT-GDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVE------DIQWSPNERNV 436
P+ +LA+ GD R +W NE + TV+ ++ ++ + E W+ E
Sbjct: 92 PSSGDLLASSGDFLR---LWEINEDSS-TVEPISVLNNSKTSEFCAPLTSFDWNDVEPKR 147
Query: 437 LATCSVDKTIRIWD 478
L TCS+D T IWD
Sbjct: 148 LGTCSIDTTCTIWD 161
Score = 31.5 bits (68), Expect = 0.55
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +1
Query: 526 HQSDINVISWNGKE-PFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTA--PVTSVEW 690
HQ+ +N I+W + I SGGDD IW+L + ++A + ++W
Sbjct: 263 HQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNGIDPMSVYSAGSEINQLQW 320
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 32.3 bits (70), Expect = 0.31
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
H S V I ++ + N+LAT S D+++++WD
Sbjct: 344 HDSEVSSISYNIHAPNLLATGSADESVKLWD 374
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 550 SWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
+W + +ASG +D + +WD+ T V T +HH V +V W+
Sbjct: 223 NWENRN-IVASGSEDKKVKVWDVA--TGKCKV-TMEHHEKKVHAVAWN 266
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 520 NAHQSDINVISWNGKEP-FIASGGDDGFLHIWDL 618
+AH S+++ IS+N P +A+G D + +WDL
Sbjct: 342 HAHDSEVSSISYNIHAPNLLATGSADESVKLWDL 375
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 8/92 (8%)
Frame = +2
Query: 275 CPTESG----MLATGDCRRDIHIWRPNEGGTWT--VDQRPLVGHTSSVEDIQWSPNERNV 436
CP + G +A G I IW + V + G T W RN+
Sbjct: 172 CPLKGGGKGNFVAIGTMESSIEIWDLDLVNEVLPCVQLGRIAGQTLFFLTFNWE--NRNI 229
Query: 437 LATCSVDKTIRIWDTRAAPQKACMS--QLKMH 526
+A+ S DK +++WD K M + K+H
Sbjct: 230 VASGSEDKKVKVWDVATGKCKVTMEHHEKKVH 261
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +2
Query: 296 LATGDCRRDIHIWR---PNEGGTWTVDQ-RPLVGHTSSVEDIQWSPNERNVLATCSVDKT 463
LA D+ +W +G V + L GH S+V + +SPN ++ T S D +
Sbjct: 254 LAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQII-TASKDGS 312
Query: 464 IRIWD 478
IR+W+
Sbjct: 313 IRVWN 317
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 8/43 (18%)
Frame = +1
Query: 511 TAENAHQSDINVISWNGK--------EPFIASGGDDGFLHIWD 615
TAE AH+ DI ISW K + + GDD + +W+
Sbjct: 381 TAEKAHEGDITCISWAPKAITVGERHAMVLGTSGDDKKVKLWE 423
>At3g56990.1 68416.m06344 glycine-rich protein conserved
hypothetical protein SPCC330.09 - Schizosaccharomyces
pombe, PIR:T41319
Length = 711
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 538 INVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKH---HTAPVTSVEW 690
+NV+S + +A GG+DG + +D+R +++ + H A VT++E+
Sbjct: 185 LNVVSRSNLHGLVACGGEDGAVEFFDMRMKSSAARINAVTHGGDAAAEVTAIEF 238
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 32.3 bits (70), Expect = 0.31
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Frame = +2
Query: 263 ALDWCPTESGMLA-TGDCR-----RD-IHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSP 421
++ W PT L TG + RD + + +G + D + GH + +W P
Sbjct: 229 SVSWSPTSGQFLCVTGSAQAKIFDRDGLTLGEFMKGDMYIRDLKNTKGHICGLTCGEWHP 288
Query: 422 NERNVLATCSVDKTIRIWD 478
+ + T S D ++RIWD
Sbjct: 289 RTKETVLTSSEDGSLRIWD 307
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 538 INVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTP-VGTFKHHTAPVTSVEW 690
+ +W+ IA G DG + IW L+ S P + K HT +TSV++
Sbjct: 330 VTTCAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKF 381
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 523 AHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSV 684
AH DI + ++ + S DG L +WDLRQ + V + P T+V
Sbjct: 371 AHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNV 424
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +1
Query: 574 IASGGDDGFLHIWDLRQFTNSTPV---GTFKHHTAPVTSVEW 690
+ + +DG L IWD+ F + T V + PVT+ W
Sbjct: 294 VLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAW 335
>At5g57090.1 68418.m07128 auxin transport protein (EIR1) identical
to auxin transport protein EIR1 [Arabidopsis thaliana]
gi|3377507|gb|AAC39513; identical to root gravitropism
control protein [Arabidopsis thaliana]
gi|4322486|gb|AAD16060
Length = 647
Score = 31.9 bits (69), Expect = 0.41
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +1
Query: 535 DINVISWNGKEPFIASG--GDDGFLHIWDLRQFTNSTPVGTF-KHHTAPVTS 681
D +VIS NG+EP GDDG LH+ R S+ + +F K H + S
Sbjct: 178 DSDVISLNGREPLQTDAEIGDDGKLHVVVRRSSAASSMISSFNKSHGGGLNS 229
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 31.9 bits (69), Expect = 0.41
Identities = 26/89 (29%), Positives = 37/89 (41%)
Frame = +2
Query: 290 GMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIR 469
G GD R +H W E L GH V I P+ + L T S D+T+R
Sbjct: 121 GNCTYGDKCRYLHCWSKGESFALLTQ---LDGHEKLVSGIAL-PSGSDKLYTGSKDETLR 176
Query: 470 IWDTRAAPQKACMSQLKMHIKVTLMLYHG 556
+WD + C LK+ ++ +L G
Sbjct: 177 VWDCASG---QCTGVLKLGGEIGCVLSEG 202
Score = 30.7 bits (66), Expect = 0.96
Identities = 24/85 (28%), Positives = 34/85 (40%)
Frame = +2
Query: 293 MLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRI 472
+L G I WR N L GHT +V + N L + S+DKTI++
Sbjct: 242 LLFAGTQDGSILAWRYNAATNCFEPSASLTGHTLAVVTLYVGANR---LYSGSMDKTIKV 298
Query: 473 WDTRAAPQKACMSQLKMHIKVTLML 547
W + C+ L H V + L
Sbjct: 299 W---SLDNLQCIQTLTDHSSVVMSL 320
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 31.9 bits (69), Expect = 0.41
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +2
Query: 305 GDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
GD R +H W ++G ++++ + L GH V I P+ + L T S D+T+RIWD
Sbjct: 119 GDKCRYLHCW--SKGDSFSLLTQ-LDGHQKVVTGIAL-PSGSDKLYTASKDETVRIWD 172
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 538 INVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
I V+++NG +A+ GDD + + + F S V K H PVT +++H
Sbjct: 107 IRVLAFNGSGSLLAAAGDDEGIKL--INTFDGSI-VRVLKGHKGPVTGLDFH 155
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
H ++ + W+PN + + AT +DK + +WD
Sbjct: 237 HLEAICYLTWAPNGKYI-ATSGLDKQVLLWD 266
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 31.9 bits (69), Expect = 0.41
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +1
Query: 469 NMGY*SSTTKGLHVTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNS 636
N+ SS + G T H+ + ++ N + SGG + L +WD R + S
Sbjct: 193 NISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKS 248
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 31.9 bits (69), Expect = 0.41
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +1
Query: 469 NMGY*SSTTKGLHVTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNS 636
N+ SS + G T H+ + ++ N + SGG + L +WD R + S
Sbjct: 193 NISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKS 248
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 31.9 bits (69), Expect = 0.41
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +2
Query: 278 PTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVD 457
P E LAT ++IW G +++ + L GH S V + + + + +AT S D
Sbjct: 475 PQEGYFLATASYDMKVNIW---SGRDFSL-VKSLAGHESKVASLDITADS-SCIATVSHD 529
Query: 458 KTIRIW 475
+TI++W
Sbjct: 530 RTIKLW 535
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLATCSVDKTIRIWDTR 484
H + V +++ P E LAT S D + IW R
Sbjct: 464 HANLVSQVKYEPQEGYFLATASYDMKVNIWSGR 496
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +2
Query: 296 LATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
LAT R +W+ + GT + GH + + + P+ + L T S DKT R+W
Sbjct: 313 LATASADRTAKLWKTD--GTLL---QTFEGHLDRLARVAFHPSGK-YLGTTSYDKTWRLW 366
Query: 476 D 478
D
Sbjct: 367 D 367
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = +1
Query: 499 GLHVTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVT 678
G + + H + I++ AS G D +WDLR + F+ H PV
Sbjct: 371 GAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLR---TGRSILVFQGHIKPVF 427
Query: 679 SVEW 690
SV +
Sbjct: 428 SVNF 431
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDT 481
L H D+ +SP + + LAT S D+T ++W T
Sbjct: 294 LKDHKERATDVVFSPVD-DCLATASADRTAKLWKT 327
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +2
Query: 296 LATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
L T + +W N G + + GH+ SV I + + + A+C +D R+W
Sbjct: 354 LGTTSYDKTWRLWDINTGAELLLQE----GHSRSVYGIAFQ-QDGALAASCGLDSLARVW 408
Query: 476 DTR 484
D R
Sbjct: 409 DLR 411
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 499 GLHVTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLR 621
G + H + ++++ +ASGG+D IWDLR
Sbjct: 413 GRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLR 453
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 508 VTAENAHQSDINVISWNGKEP-FIASGGDDGFLHIWDLRQFTNSTPVGTFK 657
VT H+ + I ++ +P +ASG DDG + +W + Q +GT K
Sbjct: 569 VTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ---GVSIGTIK 616
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 508 VTAENAHQSDINVISWNGKEP-FIASGGDDGFLHIWDLRQFTNSTPVGTFK 657
VT H+ + I ++ +P +ASG DDG + +W + Q +GT K
Sbjct: 569 VTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ---GVSIGTIK 616
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 31.5 bits (68), Expect = 0.55
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 565 EPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW 690
+ ++A+G DG +H+W L + V K T+P+ W
Sbjct: 457 DDYVAAGSADGSVHVWSL---SKGNIVSILKEQTSPILCCSW 495
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Frame = +2
Query: 293 MLATGDCRRDIHIWRPNEGGTWTVD----QRPLVGHTSSVEDIQWSPNERNVLATCSVDK 460
M T D + I N W V + L GHT V + S + + + D+
Sbjct: 279 MAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDR 338
Query: 461 TIRIWD 478
TI++WD
Sbjct: 339 TIKLWD 344
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 31.5 bits (68), Expect = 0.55
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 386 HTSSVEDIQWS-PNERNVLATCSVDKTIRIWD 478
H +V D+ ++ PN + + TC DK I++WD
Sbjct: 451 HVGAVNDLAFANPNRQLCVITCGDDKLIKVWD 482
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 31.5 bits (68), Expect = 0.55
Identities = 15/60 (25%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = +1
Query: 520 NAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPV---GTFKHHTAPVTSVEW 690
+AH+ ++ + F+ +GG+DG + ++++R++ + T V + HT+PV S+ +
Sbjct: 333 DAHEGTTYSLARSHTGDFLFTGGEDGGIKMFEIRRYGSETSVVLISQWMPHTSPVYSLSF 392
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 31.5 bits (68), Expect = 0.55
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +2
Query: 335 RPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMS 511
RP W + R L GH V + + P+ T S D+TI+IWD K ++
Sbjct: 153 RPEWHAPWK-NYRVLQGHLGWVRSVAFDPSNE-WFCTGSADRTIKIWDVATGVLKLTLT 209
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
H SD+ + +P + +G D + WDLR + T +H V ++ H
Sbjct: 294 HDSDVFSVLARPTDPQVITGSHDSTIKFWDLRY---GKSMATITNHKKTVRAMALH 346
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 31.5 bits (68), Expect = 0.55
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTR 484
L+GH V SP ++L T S D T+++WD R
Sbjct: 174 LLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDAR 209
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 31.5 bits (68), Expect = 0.55
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDL 618
H +++NV++++ ++ SGG +G L +W L
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQL 312
Score = 30.7 bits (66), Expect = 0.96
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 323 IHIWR-PNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
IHIW P+ G V ++ + HT + + P ER V+A V + IW
Sbjct: 189 IHIWDVPSGGSRHAVSRKMTLHHTKVINAFAFHPTER-VIAAGDVTGRVLIW 239
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 31.1 bits (67), Expect = 0.73
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 496 KGLHVTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 624
+G+ V H+S +N I+ + F S DD + +WD R+
Sbjct: 1070 RGVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDSRK 1112
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQK-ACMSQLKMHIK 532
H S+V DI S ++ + + S D T+++WD+R + + S+L H++
Sbjct: 1080 HRSAVNDIATS-SDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLE 1128
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 31.1 bits (67), Expect = 0.73
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 8/63 (12%)
Frame = +1
Query: 520 NAHQSDINVISWNGKEPFIASGGDDGFLHIWDL--------RQFTNSTPVGTFKHHTAPV 675
+ H + + ++G + + SG DG + +W L RQ N+ F HT V
Sbjct: 117 HGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSV 176
Query: 676 TSV 684
T +
Sbjct: 177 TDI 179
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 31.1 bits (67), Expect = 0.73
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQ 496
L GH W PN + +LAT + D T R+WD R Q
Sbjct: 315 LEGHLDYSFSSAWHPNGQ-ILATGNQDTTCRLWDVRNLSQ 353
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 31.1 bits (67), Expect = 0.73
Identities = 15/70 (21%), Positives = 30/70 (42%)
Frame = +2
Query: 266 LDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLAT 445
+D+ P +L T + IH+W + V + L GHT ++ +P ++ +
Sbjct: 214 VDYNPKREHILVTAEDESGIHVWDLRKA---KVPVQELPGHTHWTWAVRCNPEYDGLILS 270
Query: 446 CSVDKTIRIW 475
D + +W
Sbjct: 271 AGTDSVVNLW 280
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 517 ENAHQSDINVISWNGK-EPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHT 666
E+AH + + +N K E + + D+ +H+WDLR+ PV HT
Sbjct: 207 EHAH---VRGVDYNPKREHILVTAEDESGIHVWDLRK--AKVPVQELPGHT 252
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 31.1 bits (67), Expect = 0.73
Identities = 11/37 (29%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 380 VGHT-SSVEDIQWSPNERNVLATCSVDKTIRIWDTRA 487
VG++ S+ ++W ++ +L++C+ IR+WD R+
Sbjct: 136 VGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDIRS 172
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 30.7 bits (66), Expect = 0.96
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTR 484
L GH W PN AT + DKT RIWDTR
Sbjct: 315 LKGHLDYSFASAWHPNGVT-FATGNQDKTCRIWDTR 349
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 30.7 bits (66), Expect = 0.96
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTR 484
L GH W PN AT + DKT RIWDTR
Sbjct: 309 LKGHLDYSFASAWHPNGVT-FATGNQDKTCRIWDTR 343
>At5g27960.1 68418.m03367 MADS-box protein (AGL90)
Length = 320
Score = 30.7 bits (66), Expect = 0.96
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 433 VPFIWRPLYVFNRTGMPYKGSLVYSPSATFIWSPYMN 323
+PF+ R Y +N+ S Y PS T ++ PY+N
Sbjct: 281 IPFVDRNYYNYNQLPAVDLASTSYMPSTTDVYDPYIN 317
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 30.7 bits (66), Expect = 0.96
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +2
Query: 335 RPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMS 511
RP W + R + GH V + + P+ T S D+TI+IWD K ++
Sbjct: 159 RPEWHAPWK-NYRVIQGHLGWVRSVAFDPSNE-WFCTGSADRTIKIWDVATGVLKLTLT 215
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = +2
Query: 284 ESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLV-GHTSSVEDIQWS--PNERNVLATCSV 454
E G++ TG I W G ++ + + G S I + N + L TC
Sbjct: 396 EDGVMVTGGDNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEA 455
Query: 455 DKTIRIW--DTRAAPQ 496
DKTI++W D A P+
Sbjct: 456 DKTIKMWKEDENATPE 471
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 30.7 bits (66), Expect = 0.96
Identities = 18/66 (27%), Positives = 35/66 (53%)
Frame = +2
Query: 278 PTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVD 457
P + + + DC I IW+ +GG R +VG V ++ P+ +LA+C ++
Sbjct: 331 PNDEYVTSGSDCGH-IFIWK-KKGGKLV---RAMVGDRRVVNQLESHPHIP-LLASCGIE 384
Query: 458 KTIRIW 475
K++++W
Sbjct: 385 KSVKLW 390
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +1
Query: 520 NAHQSDINVISWNGKEPFIASGGDDGFLHIWD 615
N H+ +N + +N + SG DD + +W+
Sbjct: 52 NGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWN 83
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 30.7 bits (66), Expect = 0.96
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +2
Query: 272 WCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCS 451
W P +++ G+ + I IW E G VGH + + + ++ + L T S
Sbjct: 156 WGPLNQTIVSGGE-DKVIRIWDA-ETGKLLKQSDEEVGHKKDITSLCKAADDSHFL-TGS 212
Query: 452 VDKTIRIWDTR 484
+DKT ++WD R
Sbjct: 213 LDKTAKLWDMR 223
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 30.7 bits (66), Expect = 0.96
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +2
Query: 272 WCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCS 451
W P +++ G+ + I IW E G VGH + + + ++ + L T S
Sbjct: 156 WGPLNQTIVSGGE-DKVIRIWDA-ETGKLLKQSDEEVGHKKDITSLCKAADDSHFL-TGS 212
Query: 452 VDKTIRIWDTR 484
+DKT ++WD R
Sbjct: 213 LDKTAKLWDMR 223
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 30.7 bits (66), Expect = 0.96
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +2
Query: 272 WCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCS 451
W P +++ G+ + I IW E G VGH + + + ++ + L T S
Sbjct: 156 WGPLNQTIVSGGE-DKVIRIWDA-ETGKLLKQSDEEVGHKKDITSLCKAADDSHFL-TGS 212
Query: 452 VDKTIRIWDTR 484
+DKT ++WD R
Sbjct: 213 LDKTAKLWDMR 223
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 30.7 bits (66), Expect = 0.96
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTR 484
GH +V +++ N N LA+ S D T+R+WD +
Sbjct: 547 GHKKAVSYVKFLSN--NELASASTDSTLRLWDVK 578
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 30.7 bits (66), Expect = 0.96
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = +2
Query: 278 PTESGMLATGDCRRDIHIWRPNEGG-TWTV-DQRP--LVG-HTSSVEDIQWSPNERNVLA 442
P ESG L TG R I W N G +++ D P + G + D S + ++
Sbjct: 221 PGESGTLFTGGEDRAITAWDTNSGKLAYSIEDAHPARIKGIVVLTRNDSDGSLEDPYLIG 280
Query: 443 TCSVDKTIRIWDTRAAPQK 499
+ S D IR+WD R A ++
Sbjct: 281 SASSDGIIRVWDVRMAAKE 299
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +1
Query: 523 AHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTF--KHHTAPVTSVEWH 693
+H S I ++ +G P ASGG D +H++DL +++ +G+ +H A +T++ ++
Sbjct: 39 SHISPITTVACSG--PAAASGGSDDTIHLYDL---PSASSLGSLLDHNHAASITALSFY 92
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 30.7 bits (66), Expect = 0.96
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMH-IKVTLMLYH 553
L GH+ V I++ + +++ T S DKT+RIW LK H +V + H
Sbjct: 260 LTGHSKKVTSIKFV-GDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVH 318
Query: 554 GMEK 565
K
Sbjct: 319 ATNK 322
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
H + I + G + + D + IW + N T T K H+A V +V H
Sbjct: 263 HSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVH 318
>At5g26580.1 68418.m03186 MADS-box protein (AGL34) MADS box protein
EGM1, Eucalyptus grandis, EMBL:AF029975; contains Pfam
profile PF00319: SRF-type transcription factor
(DNA-binding and dimerisation domain)
Length = 345
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 433 VPFIWRPLYVFNRTGMPYKGSLVYSPSATFIWSPYMN 323
+PF+ Y +N+ + GS Y PS T ++ PY N
Sbjct: 306 IPFMDGNYYNYNQLPVVDHGSTSYMPSTTGVYDPYFN 342
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 508 VTAENAHQSDINVISWNGK-EPFIASGGDDGFLHIWDLRQ 624
VT E+A + + +S++ P +ASGG G + IW+L +
Sbjct: 217 VTFEHASRGAVTALSFSTDGRPLLASGGSFGVISIWNLNK 256
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +1
Query: 484 SSTTKGLHV---TAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 624
SS++ LHV T E + +N + +G ++ GG DGF+ W+ ++
Sbjct: 251 SSSSSSLHVLKATLEGRAEVSVNSVVVSGDGNWVYGGGSDGFVIGWEKKE 300
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +2
Query: 293 MLATGDCRRDIHIWRPNEGGTWTVDQRPL---VGHTSSVEDIQWSPNERNVLATCSVDKT 463
M+ + R ++WR G + PL H + SP + LAT S DKT
Sbjct: 176 MVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANK-YLATASSDKT 234
Query: 464 IRIWD 478
++IW+
Sbjct: 235 VKIWN 239
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1
Query: 508 VTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLR 621
V ++H +++ + + ++ SG +DG + IWDLR
Sbjct: 71 VMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLR 108
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 574 IASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWH 693
+ G +DG + WDL ++ + F+ H VTSV +H
Sbjct: 243 VIGGSEDGLVFFWDL---VDAKVLSKFRAHDLVVTSVSYH 279
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 359 TVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
T + L GH +V +++ + N TC D+TIR+W+
Sbjct: 8 TKEAHILKGHEGAVLAARFN-GDGNYALTCGKDRTIRLWN 46
>At4g01530.1 68417.m00198 hypothetical protein
Length = 239
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -2
Query: 666 SVMFECTHWSTICKLSQVP 610
+V+FEC+H IC+LS++P
Sbjct: 109 NVLFECSHSRKICELSKIP 127
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +2
Query: 275 CPTESGMLATGDCRRDIHIWR--PNEGGTWTVDQRPLVGHTSSVEDIQWSP----NERNV 436
C +AT R I +W P++ +T ++ L+GHTS V + W P
Sbjct: 27 CVCNDENIATSSRDRTIRVWSLDPSDKRKYT-SEKILLGHTSFVGPLAWIPPTDEYPEGR 85
Query: 437 LATCSVDKTIRIWD 478
L + S+D + +W+
Sbjct: 86 LVSGSMDTFVFVWN 99
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +2
Query: 275 CPTESGMLATGDCRRDIHIWR--PNEGGTWTVDQRPLVGHTSSVEDIQWSP----NERNV 436
C +AT R I +W P++ +T ++ L+GHTS V + W P
Sbjct: 27 CVCNDENIATSSRDRTIRVWSLDPSDKRKYT-SEKILLGHTSFVGPLAWIPPTDEYPEGR 85
Query: 437 LATCSVDKTIRIWD 478
L + S+D + +W+
Sbjct: 86 LVSGSMDTFVFVWN 99
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Frame = +1
Query: 505 HVTAEN--AHQSDINVISWNGKEPFIASGGDDGFLHIWDL------RQFTNSTPVGTFKH 660
H+ N +H ++ + + + SG +DG + IWDL R+F + +PV T
Sbjct: 74 HIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVSPVNTVVL 133
Query: 661 H 663
H
Sbjct: 134 H 134
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +2
Query: 293 MLATGDCRRDIHIWRPN-EGGTWTVDQ--RPLVGHTSSVEDIQWSPNERNVLATCSVDKT 463
M+ + R ++WR E T T + L H S + SP + LAT S DKT
Sbjct: 182 MVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNK-YLATASSDKT 240
Query: 464 IRIWD 478
++IW+
Sbjct: 241 VKIWN 245
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +2
Query: 425 ERNVLATCSVDKTIRIWDTR 484
E ++L + S+DKT+RIWD R
Sbjct: 464 ESHLLVSSSLDKTLRIWDLR 483
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 538 INVISWNGKEPFIASGGDDGFLHIWD 615
+N I+++ ASGG DGF++IWD
Sbjct: 243 VNAIAFHPIYGTFASGGCDGFVNIWD 268
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/71 (25%), Positives = 39/71 (54%)
Frame = +2
Query: 266 LDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLAT 445
L++ PT++ +L +GD + I +W + G + + + H+ V ++++SP +++ +
Sbjct: 177 LEFHPTKNNILLSGDKKGQIGVW--DFGKVYEKNVYGNI-HSVQVNNMRFSPTNDDMVYS 233
Query: 446 CSVDKTIRIWD 478
S D TI D
Sbjct: 234 ASSDGTIGYTD 244
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +2
Query: 299 ATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWD 478
A+G + +W P GGT RP G +++ +++ P + +A D+ ++D
Sbjct: 184 ASGSDDGTVQMWDPRNGGTLEETVRP--GGGAAICSVEFDPFGGSSIAVGCADRNAYVYD 241
Query: 479 TR 484
R
Sbjct: 242 IR 243
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDT 481
L GH + +++ P+ ++A+ S+D +R+W+T
Sbjct: 144 LTGHRRTPWVVRFHPHHSEIVASGSLDLEVRLWNT 178
>At5g01260.2 68418.m00035 glycoside hydrolase starch-binding
domain-containing protein low similarity to SP|P31797
Cyclomaltodextrin glucanotransferase precursor (EC
2.4.1.19) (Cyclodextrin-glycosyltransferase) (CGTase)
{Bacillus stearothermophilus}; contains Pfam profile
PF00686: Starch binding domain
Length = 385
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 11/57 (19%)
Frame = +2
Query: 341 NEGGTWTVDQRPLVGHT--------SSVEDIQWSPNERNVLATCSVDKTIRI---WD 478
++G WTVD VG + +I W P L T +KTIRI WD
Sbjct: 127 SDGNVWTVDLDLPVGRLVEFKLLLKAQTGEILWQPGPNRALETWETNKTIRICEDWD 183
>At5g01260.1 68418.m00034 glycoside hydrolase starch-binding
domain-containing protein low similarity to SP|P31797
Cyclomaltodextrin glucanotransferase precursor (EC
2.4.1.19) (Cyclodextrin-glycosyltransferase) (CGTase)
{Bacillus stearothermophilus}; contains Pfam profile
PF00686: Starch binding domain
Length = 306
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 11/57 (19%)
Frame = +2
Query: 341 NEGGTWTVDQRPLVGHT--------SSVEDIQWSPNERNVLATCSVDKTIRI---WD 478
++G WTVD VG + +I W P L T +KTIRI WD
Sbjct: 127 SDGNVWTVDLDLPVGRLVEFKLLLKAQTGEILWQPGPNRALETWETNKTIRICEDWD 183
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWD 615
H+ +N +S+N + + SG DD + +WD
Sbjct: 58 HKGCVNTVSFNAEGDVLISGSDDRRVVLWD 87
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +2
Query: 383 GHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQKACMSQLKMHIKVTLMLYHGME 562
GH+ V D+ + + ++LA+ S+D + +W + SQ+ I V L + +
Sbjct: 219 GHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKISEGSEGDEQSQITGKIVVALQILGEED 278
Query: 563 KSH 571
H
Sbjct: 279 TKH 281
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = +2
Query: 272 WCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCS 451
W P +++ G+ I IW E G VGH ++ + + ++ + L T S
Sbjct: 183 WGPLNQTIVSGGEDAA-IRIWDA-ETGKLLKQSDEEVGHKEAITSLCKAADDSHFL-TGS 239
Query: 452 VDKTIRIWDTR 484
DKT ++WD R
Sbjct: 240 HDKTAKLWDMR 250
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
H + I+ SP E +V TC +D++IR W
Sbjct: 305 HNGAPRWIEHSPVE-SVFVTCGIDRSIRFW 333
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
H + I+ SP E +V TC +D++IR W
Sbjct: 397 HNGAPRWIEHSPVE-SVFVTCGIDRSIRFW 425
>At5g12920.1 68418.m01482 expressed protein contains 3 weak WD-40
repeats (PF00400); low similarity to MEK kinase alpha
(GI:4028547); transcriptional repressor TUP1
(GI:3406654) [Dictyostelium discoideum]; Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (TGF-beta receptor interacting protein 1)
(TRIP-1) (SP:Q38884) [Arabidopsis thaliana]
Length = 442
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 574 IASGGDDGFLHIWDLRQFTNST 639
I G +G +HIWDLR NS+
Sbjct: 210 IFGAGKEGIIHIWDLRGGRNSS 231
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWD 615
H+ +N +S+N + SG DD + +WD
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWD 83
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 574 IASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSV 684
+ +G +DG + +WD+R P+ + K H+ PV S+
Sbjct: 234 VLAGYEDGSILLWDIR--NAKIPLTSVKFHSEPVLSL 268
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Frame = +2
Query: 275 CPTESG-MLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVE------DIQWSPNERN 433
C +G ++ +G I +WR EGG V L GH V+ D + ER
Sbjct: 348 CLVAAGNLMFSGSADLGIRVWRRPEGGGEHVCLSVLTGHAGPVKCLAVERDQESVSGERR 407
Query: 434 -VLATCSVDKTIRIW 475
++ + S+D+++++W
Sbjct: 408 WIVYSGSLDRSVKMW 422
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 490 TTKGLHVTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDL 618
T KG N+H+ + + +N +ASG D + +WD+
Sbjct: 93 TEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDV 135
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 517 ENAHQSDINVISWNGK-EPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVE 687
E A +S ++ + WN + IAS DG + IWD+ S V K H V S++
Sbjct: 579 ELAGRSKLSSLCWNSYIKSQIASSNFDGVVQIWDV---ARSQLVTEMKEHKKRVWSID 633
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW 690
H + I ++ +ASG DG + IW +R + F H+ VTS+ +
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIR---TGVCIRRFDAHSQGVTSLSF 313
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +2
Query: 284 ESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKT 463
+S MLA+G I IWR G V R H+ V + +S + +L+T S D+T
Sbjct: 274 DSEMLASGSQDGKIKIWRIRTG----VCIRRFDAHSQGVTSLSFSRDGSQLLST-SFDQT 328
Query: 464 IRI 472
RI
Sbjct: 329 ARI 331
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 28.3 bits (60), Expect = 5.1
Identities = 8/31 (25%), Positives = 20/31 (64%)
Frame = +2
Query: 395 SVEDIQWSPNERNVLATCSVDKTIRIWDTRA 487
S+ + W +++ +L++C+ +R+WD R+
Sbjct: 147 SIRTLTWLHSDQTILSSCTDIGGVRLWDVRS 177
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 28.3 bits (60), Expect = 5.1
Identities = 8/31 (25%), Positives = 20/31 (64%)
Frame = +2
Query: 395 SVEDIQWSPNERNVLATCSVDKTIRIWDTRA 487
S+ + W +++ +L++C+ +R+WD R+
Sbjct: 147 SIRTLTWLHSDQTILSSCTDIGGVRLWDVRS 177
>At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1
significant, 2 weak WD-40 repeats (PF00400); similar to
transducin beta-like 1 protein.(SP:O60907) [Homo
sapiens]
Length = 467
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +1
Query: 496 KGLHVTAENAHQSDINVISW--NGKEPFIASGGDDGFLHIWDLR 621
+G+ V H + I + + E FI SGGDD + IW ++
Sbjct: 375 RGVGVQTYEGHVNSHTPIEFGIDPSERFILSGGDDCYTRIWSIK 418
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 27.9 bits (59), Expect = 6.8
Identities = 8/31 (25%), Positives = 19/31 (61%)
Frame = +2
Query: 395 SVEDIQWSPNERNVLATCSVDKTIRIWDTRA 487
S+ + W ++ +L++C+ +R+WD R+
Sbjct: 147 SIRTLTWLHGDQTILSSCTDIGGVRLWDVRS 177
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +1
Query: 541 NVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW 690
NV S N +ASGG +HI+D+++ N PVG+ +A VTSV++
Sbjct: 442 NVDSENASS-LLASGGKGRAIHIYDVKR--NFDPVGSV-CGSAAVTSVKF 487
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/74 (24%), Positives = 31/74 (41%)
Frame = +2
Query: 257 GFALDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNV 436
G LD +E G L + + +WR + H + V + ++P + N
Sbjct: 323 GEILDLSWSEKGYLLSSSVDETVRLWRVG-----CDECLRTFTHNNFVTCVAFNPVDDNY 377
Query: 437 LATCSVDKTIRIWD 478
+ S+D +RIWD
Sbjct: 378 FISGSIDGKVRIWD 391
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/74 (24%), Positives = 31/74 (41%)
Frame = +2
Query: 257 GFALDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNV 436
G LD +E G L + + +WR + H + V + ++P + N
Sbjct: 323 GEILDLSWSEKGYLLSSSVDETVRLWRVG-----CDECLRTFTHNNFVTCVAFNPVDDNY 377
Query: 437 LATCSVDKTIRIWD 478
+ S+D +RIWD
Sbjct: 378 FISGSIDGKVRIWD 391
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +1
Query: 508 VTAENAHQSDINVISWNGKEPFIASGGDDGFLHIW 612
V++ + HQ ++ + W+ +AS G DG + +W
Sbjct: 273 VSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLW 307
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 27.5 bits (58), Expect = 8.9
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 8/109 (7%)
Frame = +2
Query: 287 SGMLATGDCRRDIHIWRPNEGGTW----TVD-QRPLVGHTSSVEDIQWSPNERNVLATCS 451
SG+LAT DI +W N G +V Q L H +V I++SP+ +LA+ +
Sbjct: 25 SGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPS-GELLASGA 83
Query: 452 VDKTIRIWDTRAAPQKACM---SQLKMHIKVTLMLYHGMEKSHLLQAAV 589
+ IW + L H K L L + ++L+ +V
Sbjct: 84 DGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSV 132
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLR--QFTNSTPV-GTFKHHTAPVTSVEW 690
H +N I ++ +ASG D G L IW L + S V + H V ++W
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQW 120
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 624
H+ D+ + W+ + ++ SG D IWD+ +
Sbjct: 111 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNK 143
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 27.5 bits (58), Expect = 8.9
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 8/109 (7%)
Frame = +2
Query: 287 SGMLATGDCRRDIHIWRPNEGGTW----TVD-QRPLVGHTSSVEDIQWSPNERNVLATCS 451
SG+LAT DI +W N G +V Q L H +V I++SP+ +LA+ +
Sbjct: 25 SGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPS-GELLASGA 83
Query: 452 VDKTIRIWDTRAAPQKACM---SQLKMHIKVTLMLYHGMEKSHLLQAAV 589
+ IW + L H K L L + ++L+ +V
Sbjct: 84 DGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSV 132
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLR--QFTNSTPV-GTFKHHTAPVTSVEW 690
H +N I ++ +ASG D G L IW L + S V + H V ++W
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQW 120
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 624
H+ D+ + W+ + ++ SG D IWD+ +
Sbjct: 111 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNK 143
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 27.5 bits (58), Expect = 8.9
Identities = 22/73 (30%), Positives = 30/73 (41%)
Frame = +2
Query: 266 LDWCPTESGMLATGDCRRDIHIWRPNEGGTWTVDQRPLVGHTSSVEDIQWSPNERNVLAT 445
L + PT SGMLA G + I+R + V L G V +Q+S + +
Sbjct: 218 LAFSPTNSGMLAVGSYGQTTGIYREDNMELLYV----LHGQEGGVTHVQFSKDGNYLYTG 273
Query: 446 CSVDKTIRIWDTR 484
D I WD R
Sbjct: 274 GRKDPYILCWDIR 286
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 502 LHVTA-ENAHQSDINVISWNGK-EPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPV 675
+H A E ++S ++ + WN ++AS DG + +WD+ T + F H
Sbjct: 743 IHYPAIEMPNRSKLSGVCWNNYIRNYLASSDYDGIVKLWDV---TTGQAISHFIEHEKRA 799
Query: 676 TSVEW 690
SV++
Sbjct: 800 WSVDF 804
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 571 FIASGGDDGFLHIWDLR 621
++A+GG D +HIWD+R
Sbjct: 236 YLATGGVDRHVHIWDVR 252
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 538 INVISWNGKEPFIASGGDDGFLHIWD 615
+N I+++ A+GG DGF++IWD
Sbjct: 244 VNSIAFHPIYGTFATGGCDGFVNIWD 269
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 362 VDQRPLVG-HTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAA 490
+D +VG H V D+ L + SVD TI+IW R A
Sbjct: 311 IDGVQIVGKHDGEVTDLSMCQWMTTRLVSSSVDGTIKIWQDRKA 354
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 362 VDQRPLVG-HTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAA 490
+D +VG H V D+ L + SVD TI+IW R A
Sbjct: 346 IDGVQIVGKHDGEVTDLSMCQWMTTRLVSSSVDGTIKIWQDRKA 389
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = +1
Query: 526 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHT 666
H ++ ++++ +A+ G + + IWDLR+F + +F T
Sbjct: 280 HPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTIHSFHAKT 326
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 362 VDQRPLVGHTSSVEDIQWSPNERNVLATCSVDKTIRIW 475
+ RP+ S+ I + RNVL TC +D +R+W
Sbjct: 245 IQWRPMAAEQSA---IGIGKSMRNVLMTCCLDGAVRLW 279
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 517 ENAHQSDINVISWNGK-EPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHT 666
E AH + + +N K E + S D+ +H+WDLR+ PV HT
Sbjct: 207 ERAH---VRNVDYNLKREHILVSADDESGIHLWDLRK--TKFPVQELPGHT 252
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 386 HTSSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPQ 496
H +SV I W+P+ + T D IWD + Q
Sbjct: 266 HQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQ 302
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTR 484
L GH + +++ P ++A+ S+D +R+W+ +
Sbjct: 141 LTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAK 176
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = +2
Query: 377 LVGHTSSVEDIQWSPNERNVLATCSVDKTIRIWDTR 484
L GH + +++ P ++A+ S+D +R+W+ +
Sbjct: 141 LTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAK 176
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,837,260
Number of Sequences: 28952
Number of extensions: 380488
Number of successful extensions: 1744
Number of sequences better than 10.0: 207
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1693
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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