Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0904
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           29   0.14 
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    27   0.42 
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    23   9.1  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 29.1 bits (62), Expect = 0.14
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -1

Query: 169 PHHQRKRHDGGSENRAAPAKGEGNTKPVIQTFTDKSAPSH 50
           PH Q+++H  GS   A    GE +  P I     KSA +H
Sbjct: 227 PHPQQQQHILGSPTSATNGVGEESGCPTIPAGPSKSATNH 266


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 27.5 bits (58), Expect = 0.42
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 89  WFGITFAFSWRGAVLAAAVMSFPLMVRARYPIRPIVSRITIHWPSFY 229
           W G+ F F WR   + + V+S  L V A      +   I +HW S +
Sbjct: 348 WLGVIFQFLWRLGTVISRVIS--LTVYASVYSHWVFLVIILHWFSMF 392


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 116 WRGAVLAAAVMSFPLMVRAR 175
           W GA ++A  +++PL V  R
Sbjct: 125 WLGAFISACFVTYPLFVPGR 144


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,715
Number of Sequences: 2352
Number of extensions: 17534
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)