Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0904
         (694 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15177-1|AAA75509.1|  404|Homo sapiens unknown protein.                32   2.2  
AJ278120-1|CAB92314.1| 1101|Homo sapiens putative ankyrin-repeat...    30   6.8  
AB046856-1|BAB13462.2| 1864|Homo sapiens KIAA1636 protein protein.     30   6.8  
AB032974-1|BAA86462.2|  543|Homo sapiens KIAA1148 protein protein.     30   6.8  
AB020626-1|BAA74842.1|  989|Homo sapiens KIAA0819 protein protein.     30   6.8  

>U15177-1|AAA75509.1|  404|Homo sapiens unknown protein.
          Length = 404

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = -1

Query: 190 RANWVPGPHHQRKR-HDGGSENRAAPAKGEGNTKPVIQTFTDKSAPS 53
           R  WVP P H  +R  + GS  RA PA G+G            SAPS
Sbjct: 297 RIPWVPAPFHVGRRVGEPGSSLRAPPAAGDGGAPAPAALPRAWSAPS 343


>AJ278120-1|CAB92314.1| 1101|Homo sapiens putative ankyrin-repeat
           containing protein protein.
          Length = 1101

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
 Frame = -1

Query: 250 GFPSHDVVKRRPVNCNTTHYRANWVPGPHHQRKRHDGGSEN-RAAPAKGEGNTKPVIQTF 74
           G P+    +      + TH  +++ P P H    H GGS      P  G+G   P     
Sbjct: 586 GSPTRQTYQSTSPALSPTHQNSHYRPSPPHTSPAHQGGSYRFSPPPVGGQGKEYPSPPPS 645

Query: 73  TDKSAPSHR 47
             +  P +R
Sbjct: 646 PLRRGPQYR 654


>AB046856-1|BAB13462.2| 1864|Homo sapiens KIAA1636 protein protein.
          Length = 1864

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
 Frame = -1

Query: 250  GFPSHDVVKRRPVNCNTTHYRANWVPGPHHQRKRHDGGSEN-RAAPAKGEGNTKPVIQTF 74
            G P+    +      + TH  +++ P P H    H GGS      P  G+G   P     
Sbjct: 1349 GSPTRQTYQSTSPALSPTHQNSHYRPSPPHTSPAHQGGSYRFSPPPVGGQGKEYPSPPPS 1408

Query: 73   TDKSAPSHR 47
              +  P +R
Sbjct: 1409 PLRRGPQYR 1417


>AB032974-1|BAA86462.2|  543|Homo sapiens KIAA1148 protein protein.
          Length = 543

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
 Frame = -1

Query: 250 GFPSHDVVKRRPVNCNTTHYRANWVPGPHHQRKRHDGGSEN-RAAPAKGEGNTKPVIQTF 74
           G P+    +      + TH  +++ P P H    H GGS      P  G+G   P     
Sbjct: 28  GSPTRQTYQSTSPALSPTHQNSHYRPSPPHTSPAHQGGSYRFSPPPVGGQGKEYPSPPPS 87

Query: 73  TDKSAPSHR 47
             +  P +R
Sbjct: 88  PLRRGPQYR 96


>AB020626-1|BAA74842.1|  989|Homo sapiens KIAA0819 protein protein.
          Length = 989

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -2

Query: 171 ARTISGNDMTAAARTAPRQLKAKVIPNQSYRRSPINPRRP 52
           AR +S       A  APR  KA   P+Q   R P +P RP
Sbjct: 601 ARQLSRMQQMELASGAPRPRKASSAPSQGKERRPDSPTRP 640


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,407,448
Number of Sequences: 237096
Number of extensions: 2522577
Number of successful extensions: 5505
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5503
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)