Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0904
(694 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051795-1|AAK93219.1| 541|Drosophila melanogaster LD31064p pro... 31 1.1
AL033125-6|CAA21829.1| 510|Drosophila melanogaster EG:EG0007.7 ... 31 1.1
AE014298-602|AAF45923.3| 541|Drosophila melanogaster CG6121-PA ... 31 1.1
BT009997-1|AAQ22466.1| 340|Drosophila melanogaster RE35738p pro... 31 2.0
AE014296-3676|AAF51831.1| 340|Drosophila melanogaster CG11426-P... 31 2.0
AL138972-3|CAB72286.1| 2447|Drosophila melanogaster EG:BACR25B3.... 29 6.0
AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan pro... 29 6.0
AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB... 29 6.0
AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD... 29 6.0
AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA... 29 6.0
AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE... 29 6.0
AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC... 29 6.0
AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF... 29 6.0
>AY051795-1|AAK93219.1| 541|Drosophila melanogaster LD31064p
protein.
Length = 541
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 247 NPGLPNLIALQHIPLSPAGVIAKRPAPIALPNSCAP 354
+P P AL IP +P G P P +PNS AP
Sbjct: 115 SPQHPGSGALAAIPQTPTGASGSVPPPAGIPNSVAP 150
>AL033125-6|CAA21829.1| 510|Drosophila melanogaster EG:EG0007.7
protein.
Length = 510
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 247 NPGLPNLIALQHIPLSPAGVIAKRPAPIALPNSCAP 354
+P P AL IP +P G P P +PNS AP
Sbjct: 83 SPQHPGSGALAAIPQTPTGASGSVPPPAGIPNSVAP 118
>AE014298-602|AAF45923.3| 541|Drosophila melanogaster CG6121-PA
protein.
Length = 541
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 247 NPGLPNLIALQHIPLSPAGVIAKRPAPIALPNSCAP 354
+P P AL IP +P G P P +PNS AP
Sbjct: 115 SPQHPGSGALAAIPQTPTGASGSVPPPAGIPNSVAP 150
>BT009997-1|AAQ22466.1| 340|Drosophila melanogaster RE35738p
protein.
Length = 340
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 113 SWRGAVLAAAVMSFPLMVRARYPIRPIVSRITIHWPSFYNVVTGKTLG 256
+WRG+ L+ + F +++ A Y +SR+ HW + +V++G LG
Sbjct: 233 TWRGSKLSRHFVQFAVVMVAWYTA---LSRVMDHWHHWSDVLSGSLLG 277
>AE014296-3676|AAF51831.1| 340|Drosophila melanogaster CG11426-PA
protein.
Length = 340
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 113 SWRGAVLAAAVMSFPLMVRARYPIRPIVSRITIHWPSFYNVVTGKTLG 256
+WRG+ L+ + F +++ A Y +SR+ HW + +V++G LG
Sbjct: 233 TWRGSKLSRHFVQFAVVMVAWYTA---LSRVMDHWHHWSDVLSGSLLG 277
>AL138972-3|CAB72286.1| 2447|Drosophila melanogaster EG:BACR25B3.1
protein.
Length = 2447
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +1
Query: 280 HIPLSPAGVIAKRPAPIALPNSCAP-EWRMAN 372
H P VI + P +P SC P EW+ AN
Sbjct: 743 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 774
>AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan
protein.
Length = 4223
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +1
Query: 280 HIPLSPAGVIAKRPAPIALPNSCAP-EWRMAN 372
H P VI + P +P SC P EW+ AN
Sbjct: 734 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 765
>AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB,
isoform B protein.
Length = 3215
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +1
Query: 280 HIPLSPAGVIAKRPAPIALPNSCAP-EWRMAN 372
H P VI + P +P SC P EW+ AN
Sbjct: 734 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 765
>AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD,
isoform D protein.
Length = 4223
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +1
Query: 280 HIPLSPAGVIAKRPAPIALPNSCAP-EWRMAN 372
H P VI + P +P SC P EW+ AN
Sbjct: 734 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 765
>AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA,
isoform A protein.
Length = 4179
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +1
Query: 280 HIPLSPAGVIAKRPAPIALPNSCAP-EWRMAN 372
H P VI + P +P SC P EW+ AN
Sbjct: 734 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 765
>AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE,
isoform E protein.
Length = 4228
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +1
Query: 280 HIPLSPAGVIAKRPAPIALPNSCAP-EWRMAN 372
H P VI + P +P SC P EW+ AN
Sbjct: 734 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 765
>AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC,
isoform C protein.
Length = 4117
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +1
Query: 280 HIPLSPAGVIAKRPAPIALPNSCAP-EWRMAN 372
H P VI + P +P SC P EW+ AN
Sbjct: 734 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 765
>AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF,
isoform F protein.
Length = 4629
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +1
Query: 280 HIPLSPAGVIAKRPAPIALPNSCAP-EWRMAN 372
H P VI + P +P SC P EW+ AN
Sbjct: 1140 HYPTQNVNVIRPKLGPNPIPKSCRPHEWQCAN 1171
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,568,428
Number of Sequences: 53049
Number of extensions: 749465
Number of successful extensions: 2003
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2001
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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