Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0903
         (424 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   6.5  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    20   8.6  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    20   8.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    20   8.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   8.6  

>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 141 QEYSQVFNTLIG*VPVKVPPGKL 73
           +EY  V +T++  V     PGKL
Sbjct: 231 REYENVNSTVVNWVNAGADPGKL 253


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 102 VPVKVPPGKLFFDITSGL 49
           VP++  PG LF     GL
Sbjct: 468 VPLRFDPGSLFVQNRGGL 485


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 272 STSVCRLSSAERAGASGRPTG 210
           S   CRL  +E A    +PTG
Sbjct: 49  SLPACRLFCSEAAALWPKPTG 69


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -3

Query: 251 SSAERAGASGRPTGPRRTVSVRTERLSVAGTISGGRC 141
           + +E   AS +PT    T   +T +   +G  S G C
Sbjct: 407 TESEPTQASEQPTESSTTQKPQTTKTPESGNESDGVC 443


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -3

Query: 161 TISGGRCKNILKYSIPSLVRY 99
           T+  G  +NI  ++IPS++++
Sbjct: 566 TLKIGVYRNIKNFNIPSILQF 586


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,709
Number of Sequences: 336
Number of extensions: 1627
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9384961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)