Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0903
         (424 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    25   1.5  
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    25   1.5  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   3.5  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   3.5  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   6.0  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    22   8.0  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    22   8.0  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    22   8.0  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    22   8.0  

>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 309 ADVGPGSADLEFKG 350
           ADVGPG+ + EF G
Sbjct: 145 ADVGPGAGEREFNG 158


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 309 ADVGPGSADLEFKG 350
           ADVGPG+ + EF G
Sbjct: 145 ADVGPGAGEREFNG 158


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +3

Query: 300 DKKADVGPGSADLEFKGGYGRGRP 371
           DK  +  P S     K GYG G P
Sbjct: 678 DKLLNTMPASPASSIKSGYGEGAP 701


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -2

Query: 357 HSLP*IQDQLSLDQHQPFYHEVQHQGQQEY 268
           H LP  Q Q    +H P    + H  QQ+Y
Sbjct: 604 HYLPLQQQQQQQARHLPQQQAIHHIHQQQY 633


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +1

Query: 187 RTETVRRGPVGRPDAPAR 240
           R E    GPVG P AP R
Sbjct: 62  RGEKGNSGPVGPPGAPGR 79



 Score = 22.6 bits (46), Expect = 6.0
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 205 RGPVGRPDAPARSAED 252
           +GP G P AP R   D
Sbjct: 166 KGPAGHPGAPGRPGVD 181


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 10/48 (20%), Positives = 26/48 (54%)
 Frame = +1

Query: 34   AMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLK 177
            A+++   R Y+ +       +W++T++  EY+ IF+ +    +  ++K
Sbjct: 1149 ALKAKPIRRYIPKHRIQYKVWWFVTSQPFEYM-IFVLIMINTITLSMK 1195


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 142 HLPPEIVPATLKRSVRTETVRRGPVGRPDAPARSA 246
           +LP  I P  L+ +      RR  +G  D P  S+
Sbjct: 455 YLPASINPVKLRETSTIRRQRRTALGNRDEPHSSS 489


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 142 HLPPEIVPATLKRSVRTETVRRGPVGRPDAPARSA 246
           +LP  I P  L+ +      RR  +G  D P  S+
Sbjct: 456 YLPASINPVKLRETSTIRRQRRTALGNRDEPHSSS 490


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -2

Query: 333 QLSLDQHQPFYHEVQHQGQQEY 268
           Q    QH    H+ Q Q QQ+Y
Sbjct: 305 QQQQQQHHHHQHQPQQQHQQQY 326


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,610
Number of Sequences: 2352
Number of extensions: 6673
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 35060166
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)