Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0902
         (660 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   6.5  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    23   8.5  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   8.5  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 45   KLLRNFNPLVSIIRSKGYKH 104
            ++LR   PL +I R+KG KH
Sbjct: 954  RVLRVLRPLRAINRAKGLKH 973


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 499 KDESTTIKRDTRHRWNTGYGGGF*IKLVCS 588
           KD++  I+   +H  N   GGG+     CS
Sbjct: 84  KDDTLVIQFSVKHEQNIDCGGGYLKVFDCS 113


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 461 GRIPVPIFL*PSIDHFL*GLCSLYH 387
           G I  P++      H+L   C LYH
Sbjct: 124 GAISTPLWRRDGTGHYLCNACGLYH 148


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,582
Number of Sequences: 2352
Number of extensions: 15111
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)