Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0902
         (660 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071518-1|AAL49140.1|  180|Drosophila melanogaster RE56957p pro...   110   2e-24
AE014298-654|AAF45968.1|  180|Drosophila melanogaster CG7038-PA ...   110   2e-24
AY118497-1|AAM49866.1|  450|Drosophila melanogaster LD07917p pro...    29   4.2  
AE014298-1517|AAF47969.1|  450|Drosophila melanogaster CG1637-PC...    29   4.2  
BT021374-1|AAX33522.1|  821|Drosophila melanogaster LP02965p pro...    29   5.6  
AE013599-589|AAF59135.2|  821|Drosophila melanogaster CG8711-PA ...    29   5.6  

>AY071518-1|AAL49140.1|  180|Drosophila melanogaster RE56957p
           protein.
          Length = 180

 Score =  110 bits (264), Expect = 2e-24
 Identities = 47/80 (58%), Positives = 64/80 (80%)
 Frame = +2

Query: 269 EETRVTVVKNIPEINAKLWKIKHLIKITPIEFPYGEPTADDINYTILKENGQCLVTKKLE 448
           +++  TVVKNIPE NA+LWKIKHLIK+TP+ FPYGEPTA D+ +TILKENG+CLVTK L 
Sbjct: 85  KQSDFTVVKNIPENNARLWKIKHLIKVTPVTFPYGEPTAQDVRHTILKENGECLVTKDLG 144

Query: 449 PEFGQIQALEEFDSDRKKMN 508
           P   ++ A +++D   K+++
Sbjct: 145 PIDTRLAARQDYDEQPKRLD 164



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
 Frame = +3

Query: 42  GKLLRNFNPLVSIIRSKGYKHPGGIRYPGG-----ITYYPRFPDYKDPEITPSKLFRVER 206
           G+LL         +RS G KH     Y  G     ITYYPR PD++DP + P+KLFRV+R
Sbjct: 4   GRLLNPLRSTACSVRSYG-KHNKKFLYKNGQKFEGITYYPRTPDHQDPPVEPAKLFRVQR 62

Query: 207 IKSSKHFPYWQKRIL 251
           I+  K  PYW+ RIL
Sbjct: 63  IRPLKGNPYWENRIL 77


>AE014298-654|AAF45968.1|  180|Drosophila melanogaster CG7038-PA
           protein.
          Length = 180

 Score =  110 bits (264), Expect = 2e-24
 Identities = 47/80 (58%), Positives = 64/80 (80%)
 Frame = +2

Query: 269 EETRVTVVKNIPEINAKLWKIKHLIKITPIEFPYGEPTADDINYTILKENGQCLVTKKLE 448
           +++  TVVKNIPE NA+LWKIKHLIK+TP+ FPYGEPTA D+ +TILKENG+CLVTK L 
Sbjct: 85  KQSDFTVVKNIPENNARLWKIKHLIKVTPVTFPYGEPTAQDVRHTILKENGECLVTKDLG 144

Query: 449 PEFGQIQALEEFDSDRKKMN 508
           P   ++ A +++D   K+++
Sbjct: 145 PIDTRLAARQDYDEQPKRLD 164



 Score = 68.5 bits (160), Expect = 7e-12
 Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
 Frame = +3

Query: 42  GKLLRNFNPLVSIIRSKGYKHPGGIRYPGG-----ITYYPRFPDYKDPEITPSKLFRVER 206
           G+LL         +RS G KH     Y  G     ITYYPR PD++DP + P+KLFRV+R
Sbjct: 4   GRLLNPLRSTACSVRSYG-KHNKKFLYKNGQKFEGITYYPRTPDHQDPPVEPAKLFRVQR 62

Query: 207 IKSSKHFPYWQKRIL 251
           IK  K  PYW+ RIL
Sbjct: 63  IKPLKGNPYWENRIL 77


>AY118497-1|AAM49866.1|  450|Drosophila melanogaster LD07917p
           protein.
          Length = 450

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 17/62 (27%), Positives = 26/62 (41%)
 Frame = -3

Query: 400 VVYIICSWFSIRKFNWCNFNQMLDFP*FSIDFWYIFNHSDSGLLMNFQLSNILFCQYGKC 221
           V Y++C      K+N+ N+    + P  +   WY FN       ++F      F  YG  
Sbjct: 204 VPYMVCPGNHEEKYNFSNYRARFNMPGETDSLWYSFNLGPVH-FVSFSTEVYYFLSYGFK 262

Query: 220 LL 215
           LL
Sbjct: 263 LL 264


>AE014298-1517|AAF47969.1|  450|Drosophila melanogaster CG1637-PC,
           isoform C protein.
          Length = 450

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 17/62 (27%), Positives = 26/62 (41%)
 Frame = -3

Query: 400 VVYIICSWFSIRKFNWCNFNQMLDFP*FSIDFWYIFNHSDSGLLMNFQLSNILFCQYGKC 221
           V Y++C      K+N+ N+    + P  +   WY FN       ++F      F  YG  
Sbjct: 204 VPYMVCPGNHEEKYNFSNYRARFNMPGETDSLWYSFNLGPVH-FVSFSTEVYYFLSYGFK 262

Query: 220 LL 215
           LL
Sbjct: 263 LL 264


>BT021374-1|AAX33522.1|  821|Drosophila melanogaster LP02965p
           protein.
          Length = 821

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = +1

Query: 55  EILIHWFLSFDQKVINIQEVFVTLGA*HTIPDSQITKI 168
           E + HW+LSF Q++I I+ +F+ +   + + +S +  I
Sbjct: 194 EKINHWWLSFCQQMIMIRSIFLYMDRTYVLQNSTVHSI 231


>AE013599-589|AAF59135.2|  821|Drosophila melanogaster CG8711-PA
           protein.
          Length = 821

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = +1

Query: 55  EILIHWFLSFDQKVINIQEVFVTLGA*HTIPDSQITKI 168
           E + HW+LSF Q++I I+ +F+ +   + + +S +  I
Sbjct: 194 EKINHWWLSFCQQMIMIRSIFLYMDRTYVLQNSTVHSI 231


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,594,654
Number of Sequences: 53049
Number of extensions: 641803
Number of successful extensions: 1214
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)