Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0899
         (667 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.42 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.42 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.42 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.42 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   1.3  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   6.9  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = -1

Query: 277  WECFFFNLIRVHYYIVYCF 221
            W  F++N+I + ++++ CF
Sbjct: 944  WTSFYYNIIPILFFMLVCF 962


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = -1

Query: 277  WECFFFNLIRVHYYIVYCF 221
            W  F++N+I + ++++ CF
Sbjct: 944  WTSFYYNIIPILFFMLVCF 962


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = -1

Query: 277  WECFFFNLIRVHYYIVYCF 221
            W  F++N+I + ++++ CF
Sbjct: 944  WTSFYYNIIPILFFMLVCF 962


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = -1

Query: 277  WECFFFNLIRVHYYIVYCF 221
            W  F++N+I + ++++ CF
Sbjct: 944  WTSFYYNIIPILFFMLVCF 962


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 225 AFVEAPLVGILAKFIYIFYLFKNTLTLSLVLFIF 124
           + +E   V ++  F+Y F LF N +T     +IF
Sbjct: 129 SILELVAVHLVLAFLYSFDLFANGITFGWHTYIF 162


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +1

Query: 262 KKNIPKKNGSIMNAYIYINILN 327
           ++N  K+   I+N Y Y ++ N
Sbjct: 234 RRNFSKQASEILNEYFYSHLSN 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,428
Number of Sequences: 336
Number of extensions: 2514
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)