Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0898
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    25   0.59 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    25   0.59 
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    23   3.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.2  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -2

Query: 557 TNLTSHKCQRYIISFKTHDFTFNSIMCTEVKNTLHNYVKLT 435
           + +TS    ++++SF+T  FTF  ++      T    V  T
Sbjct: 61  SGVTSPTIMKFVLSFRTGSFTFLMVVAVLSSGTTFKLVAKT 101


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -2

Query: 557 TNLTSHKCQRYIISFKTHDFTFNSIMCTEVKNTLHNYVKLT 435
           + +TS    ++++SF+T  FTF  ++      T    V  T
Sbjct: 61  SGVTSPTIMKFVLSFRTGSFTFLMVVAVLSSGTTFKLVAKT 101


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 84  LNKVLYNDSIIYCFIKCYIIACPN*SE 164
           ++K+L ND ++  +IKC +   P  SE
Sbjct: 32  VDKILNNDRVLTNYIKCLMDEGPCTSE 58


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -2

Query: 650 YHGDYWIG 627
           YHGD W+G
Sbjct: 933 YHGDQWVG 940


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,222
Number of Sequences: 336
Number of extensions: 3580
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)