Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0897
         (693 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC007955-1|AAH07955.1|  919|Homo sapiens dehydrogenase E1 and tr...    44   7e-04
BC002477-1|AAH02477.1|  919|Homo sapiens dehydrogenase E1 and tr...    41   0.004
AB046850-1|BAB13456.1|  901|Homo sapiens KIAA1630 protein protein.     41   0.004
AK126779-1|BAC86686.1|  177|Homo sapiens protein ( Homo sapiens ...    31   3.9  
AF399608-1|AAK95093.1|  216|Homo sapiens olfactory receptor prot...    31   3.9  

>BC007955-1|AAH07955.1|  919|Homo sapiens dehydrogenase E1 and
           transketolase domain containing 1 protein.
          Length = 919

 Score = 43.6 bits (98), Expect = 7e-04
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
 Frame = +2

Query: 248 VELLSGLLQCPPVKIFHKFTGRPEFPDEANAACDISTHLSKD---YFASSH 391
           + LL+GLLQ PP  +F K  G  EFP+  +A  D+ +HL+     YF + H
Sbjct: 227 LNLLTGLLQFPPELMFRKMRGLSEFPENFSATGDVLSHLTSSVDLYFGAHH 277


>BC002477-1|AAH02477.1|  919|Homo sapiens dehydrogenase E1 and
           transketolase domain containing 1 protein.
          Length = 919

 Score = 41.1 bits (92), Expect = 0.004
 Identities = 18/40 (45%), Positives = 26/40 (65%)
 Frame = +2

Query: 248 VELLSGLLQCPPVKIFHKFTGRPEFPDEANAACDISTHLS 367
           + LL+GLLQ PP  +F K  G  EFP+  +A  D+ +HL+
Sbjct: 227 LNLLTGLLQFPPELMFRKMRGLSEFPENFSATGDVLSHLT 266


>AB046850-1|BAB13456.1|  901|Homo sapiens KIAA1630 protein protein.
          Length = 901

 Score = 41.1 bits (92), Expect = 0.004
 Identities = 18/40 (45%), Positives = 26/40 (65%)
 Frame = +2

Query: 248 VELLSGLLQCPPVKIFHKFTGRPEFPDEANAACDISTHLS 367
           + LL+GLLQ PP  +F K  G  EFP+  +A  D+ +HL+
Sbjct: 239 LNLLTGLLQFPPELMFRKMRGLSEFPENFSATGDVLSHLT 278


>AK126779-1|BAC86686.1|  177|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44827 fis, clone BRACE3046837. ).
          Length = 177

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -3

Query: 112 KSANEYR-IVCNRRYFPNKRYKNRWVTLDVDANGP 11
           K  N Y  ++CN  Y P  R ++RW  L V A+ P
Sbjct: 102 KLHNSYTDVMCNPFYNPGDRIQSRWALLSVSASSP 136


>AF399608-1|AAK95093.1|  216|Homo sapiens olfactory receptor
           protein.
          Length = 216

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +2

Query: 233 GP*REVELLSGLLQCPPVKIFHKFTGRPEFPDEANAAC-DISTHLSKDYFASS 388
           GP  E+ L+S L  C P +I H F    +FP   + AC D ST++  D+  +S
Sbjct: 88  GPVVEISLISRLPFCGPNRIQHVFC---DFPPVLSLACTDTSTNVLVDFVINS 137


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,953,124
Number of Sequences: 237096
Number of extensions: 1758448
Number of successful extensions: 2773
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2773
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)