Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0897
(693 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical p... 45 4e-05
L13200-2|ABE73330.1| 810|Caenorhabditis elegans Hypothetical pr... 33 0.26
L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical pr... 33 0.26
AF016665-2|AAC71181.1| 662|Caenorhabditis elegans Hypothetical ... 31 0.59
AC006831-1|AAF39995.1| 558|Caenorhabditis elegans Hypothetical ... 28 7.3
AF025466-3|AAB71032.1| 265|Caenorhabditis elegans Hypothetical ... 27 9.6
AF025466-2|AAB71033.1| 261|Caenorhabditis elegans Hypothetical ... 27 9.6
AF024494-10|AAB70336.1| 642|Caenorhabditis elegans Hypothetical... 27 9.6
>Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical
protein ZK836.2 protein.
Length = 911
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +2
Query: 248 VELLSGLLQCPPVKIFHKFTGRPEFPDEANAACDISTHL--SKDYFAS 385
+ LL+ L+ PPV +F K GR EFP+ A+AA D+ +HL S DY S
Sbjct: 217 LNLLTQLMDFPPVHMFRKIKGRAEFPESADAAGDVLSHLVSSFDYKGS 264
Score = 29.5 bits (63), Expect = 2.4
Identities = 9/17 (52%), Positives = 17/17 (100%)
Frame = +3
Query: 204 ERIEQVILGMAHRGKLN 254
+++E++I+G+AHRG+LN
Sbjct: 202 KQVEEIIIGIAHRGRLN 218
>Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical
protein ZK836.2 protein.
Length = 911
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +2
Query: 248 VELLSGLLQCPPVKIFHKFTGRPEFPDEANAACDISTHL--SKDYFAS 385
+ LL+ L+ PPV +F K GR EFP+ A+AA D+ +HL S DY S
Sbjct: 217 LNLLTQLMDFPPVHMFRKIKGRAEFPESADAAGDVLSHLVSSFDYKGS 264
Score = 29.5 bits (63), Expect = 2.4
Identities = 9/17 (52%), Positives = 17/17 (100%)
Frame = +3
Query: 204 ERIEQVILGMAHRGKLN 254
+++E++I+G+AHRG+LN
Sbjct: 202 KQVEEIIIGIAHRGRLN 218
>L13200-2|ABE73330.1| 810|Caenorhabditis elegans Hypothetical
protein ZK1236.3b protein.
Length = 810
Score = 32.7 bits (71), Expect = 0.26
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 166 WWFEVFFSTGQYTFSKIFKSANEYRIVCNRR 74
W F + +G+ S K+ NEYR++CN R
Sbjct: 609 WHFPPYEKSGRLNVSNTIKAINEYRLLCNSR 639
>L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical
protein ZK1236.3a protein.
Length = 1000
Score = 32.7 bits (71), Expect = 0.26
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 166 WWFEVFFSTGQYTFSKIFKSANEYRIVCNRR 74
W F + +G+ S K+ NEYR++CN R
Sbjct: 799 WHFPPYEKSGRLNVSNTIKAINEYRLLCNSR 829
>AF016665-2|AAC71181.1| 662|Caenorhabditis elegans Hypothetical
protein C49D10.8 protein.
Length = 662
Score = 31.5 bits (68), Expect = 0.59
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +3
Query: 15 PLASTSNVTQRFLYLLFGK--YRLLHTIRYSLADLKIFEKVYWPVEKKTSNHQSNAYLKH 188
P + +N+ R L G YR+ H + + LKIF++ Y P E++ N L
Sbjct: 189 PTVAFNNMFARVWQFLIGMIVYRMGHDKKITTKSLKIFQEDYTPGEERRQRFMCNTALIF 248
Query: 189 CLLFT 203
L+ T
Sbjct: 249 LLIIT 253
>AC006831-1|AAF39995.1| 558|Caenorhabditis elegans Hypothetical
protein ZK121.2 protein.
Length = 558
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 162 HQSNAYLKHCLLFTERIEQVILGMAHRGK-LNSSVGYYSVLRSRSSTSLQEDQNFRTKQT 338
H+S K L F ++++++IL + + K Y+ +L R + D N KQT
Sbjct: 155 HKSEEDRKQLLEFEKQLKELILDDSTQSKRFELPSSYHRMLLHRCAAWFGLDHNVTNKQT 214
Query: 339 QLVI 350
+V+
Sbjct: 215 DIVV 218
>AF025466-3|AAB71032.1| 265|Caenorhabditis elegans Hypothetical
protein T23F4.3 protein.
Length = 265
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 278 PPVKIFHKFTGRPEFPDE 331
P V IFH FTGR EF ++
Sbjct: 56 PAVIIFHAFTGRTEFDNQ 73
>AF025466-2|AAB71033.1| 261|Caenorhabditis elegans Hypothetical
protein T23F4.1 protein.
Length = 261
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 278 PPVKIFHKFTGRPEFPDE 331
P V IFH FTGR EF ++
Sbjct: 56 PAVIIFHAFTGRTEFDNQ 73
>AF024494-10|AAB70336.1| 642|Caenorhabditis elegans Hypothetical
protein C38C3.7 protein.
Length = 642
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/77 (22%), Positives = 33/77 (42%)
Frame = +3
Query: 93 RYSLADLKIFEKVYWPVEKKTSNHQSNAYLKHCLLFTERIEQVILGMAHRGKLNSSVGYY 272
R D + E W VE T NA ++ L + + ++ + K+N + Y
Sbjct: 334 RMGFEDCETVEDFIWHVENSTKKTVKNAKIERRLALHKVSRKFKDAVSRKAKVN--LEYL 391
Query: 273 SVLRSRSSTSLQEDQNF 323
V+ + S +++ D +F
Sbjct: 392 EVIHRKESATIRFDPDF 408
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,757,452
Number of Sequences: 27780
Number of extensions: 304418
Number of successful extensions: 769
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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